RNA–Protein interactions for RNA: ENST00000309546.7

LIME1-201, Transcript of Lck interacting transmembrane adaptor 1, humanhuman

APPRIS P3 TSL 1 (best) BASIC

Gene LIME1, Length 1,178 nt, Biotype protein coding.

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
LIME1-201ENST00000309546 GJA10Q969M2 543 aa22.08■■□□□ 1.13
LIME1-201ENST00000309546 TEKT3Q9BXF9 490 aa22.08■■□□□ 1.13
LIME1-201ENST00000309546 FTHL17Q9BXU8 183 aa22.08■■□□□ 1.13
LIME1-201ENST00000309546 C22orf23Q9BZE7 217 aa22.08■■□□□ 1.13
LIME1-201ENST00000309546 SLKQ9H2G2 1235 aaPredicted RBP22.08■■□□□ 1.13
LIME1-201ENST00000309546 KDM3AQ9Y4C1 1321 aa22.07■■□□□ 1.12
LIME1-201ENST00000309546 ZBTB42B2RXF5 422 aa22.07■■□□□ 1.12
LIME1-201ENST00000309546 EDIL3O43854 480 aa22.07■■□□□ 1.12
LIME1-201ENST00000309546 CDKL5O76039 1030 aa22.07■■□□□ 1.12
LIME1-201ENST00000309546 TDP2O95551 362 aa22.07■■□□□ 1.12
LIME1-201ENST00000309546 NFX1Q12986 1120 aaKnown RBP22.07■■□□□ 1.12
LIME1-201ENST00000309546 PTPROQ16827 1216 aa22.07■■□□□ 1.12
LIME1-201ENST00000309546 LRCH2Q5VUJ6 765 aa22.07■■□□□ 1.12
LIME1-201ENST00000309546 KIAA0319LQ8IZA0 1049 aa22.07■■□□□ 1.12
LIME1-201ENST00000309546 METTL13Q8N6R0 699 aa22.07■■□□□ 1.12
LIME1-201ENST00000309546 NECAB3Q96P71 396 aaPredicted RBP22.07■■□□□ 1.12
LIME1-201ENST00000309546 DISC1Q9NRI5 854 aa22.07■■□□□ 1.12
LIME1-201ENST00000309546 KIAA1671Q9BY89 1806 aa22.06■■□□□ 1.12
LIME1-201ENST00000309546 H3BNC9 293 aa22.06■■□□□ 1.12
LIME1-201ENST00000309546 DTNBO60941 627 aa22.06■■□□□ 1.12
LIME1-201ENST00000309546 C22orf31O95567 290 aa22.06■■□□□ 1.12
LIME1-201ENST00000309546 BMP1P13497 986 aa22.06■■□□□ 1.12
LIME1-201ENST00000309546 BTG3Q14201 252 aaPredicted RBP22.06■■□□□ 1.12
LIME1-201ENST00000309546 DAGLBQ8NCG7 672 aa22.06■■□□□ 1.12
LIME1-201ENST00000309546 FAM167AQ96KS9 214 aa22.06■■□□□ 1.12
LIME1-201ENST00000309546 RC3H2Q9HBD1 1191 aaKnown RBP22.06■■□□□ 1.12
LIME1-201ENST00000309546 KCNJ14Q9UNX9 436 aa22.06■■□□□ 1.12
LIME1-201ENST00000309546 CEP131Q9UPN4 1083 aa22.06■■□□□ 1.12
LIME1-201ENST00000309546 TTC28Q96AY4 2481 aa22.06■■□□□ 1.12
LIME1-201ENST00000309546 RPS6KA5O75582 802 aa22.05■■□□□ 1.12
LIME1-201ENST00000309546 ERICH6BQ5W0A0 696 aa22.05■■□□□ 1.12
LIME1-201ENST00000309546 RTN4RL1Q86UN2 441 aaPredicted RBP22.05■■□□□ 1.12
LIME1-201ENST00000309546 SLC5A5Q92911 643 aa22.05■■□□□ 1.12
LIME1-201ENST00000309546 MRPL38Q96DV4 380 aaKnown RBP22.05■■□□□ 1.12
LIME1-201ENST00000309546 RIT2Q99578 217 aa22.05■■□□□ 1.12
LIME1-201ENST00000309546 UNC45AQ9H3U1 944 aa22.05■■□□□ 1.12
LIME1-201ENST00000309546 CDHR5Q9HBB8 845 aa22.05■■□□□ 1.12
LIME1-201ENST00000309546 TPCN1Q9ULQ1 816 aa22.05■■□□□ 1.12
LIME1-201ENST00000309546 NOC2LQ9Y3T9 749 aaKnown RBP22.05■■□□□ 1.12
LIME1-201ENST00000309546 ATG2AQ2TAZ0 1938 aa22.05■■□□□ 1.12
LIME1-201ENST00000309546 DGKIO75912 1065 aa22.04■■□□□ 1.12
LIME1-201ENST00000309546 VTNP04004 478 aa22.04■■□□□ 1.12
LIME1-201ENST00000309546 CLCN3P51790 818 aa22.04■■□□□ 1.12
LIME1-201ENST00000309546 JAK3P52333 1124 aa22.04■■□□□ 1.12
LIME1-201ENST00000309546 PRKCEQ02156 737 aa22.04■■□□□ 1.12
LIME1-201ENST00000309546 NONOQ15233 471 aaKnown RBP eCLIP22.04■■□□□ 1.12
LIME1-201ENST00000309546 NPY5RQ15761 445 aa22.04■■□□□ 1.12
LIME1-201ENST00000309546 UGCGQ16739 394 aa22.04■■□□□ 1.12
LIME1-201ENST00000309546 INF2Q27J81 1249 aa22.04■■□□□ 1.12
LIME1-201ENST00000309546 KIZQ2M2Z5 673 aa22.04■■□□□ 1.12
LIME1-201ENST00000309546 GALNT17Q6IS24 598 aa22.04■■□□□ 1.12
LIME1-201ENST00000309546 NPAS4Q8IUM7 802 aa22.04■■□□□ 1.12
LIME1-201ENST00000309546 TMEM40Q8WWA1 233 aa22.04■■□□□ 1.12
LIME1-201ENST00000309546 OSMRQ99650 979 aa22.04■■□□□ 1.12
LIME1-201ENST00000309546 TMX1Q9H3N1 280 aa22.04■■□□□ 1.12
LIME1-201ENST00000309546 RWDD3Q9Y3V2 267 aa22.04■■□□□ 1.12
LIME1-201ENST00000309546 XIRP2A4UGR9 3374 aa22.03■■□□□ 1.12
LIME1-201ENST00000309546 M0R2N6 131 aa22.03■■□□□ 1.12
LIME1-201ENST00000309546 ZNF862O60290 1169 aa22.03■■□□□ 1.12
LIME1-201ENST00000309546 CSPG5O95196 566 aa22.03■■□□□ 1.12
LIME1-201ENST00000309546 OATP04181 439 aa22.03■■□□□ 1.12
LIME1-201ENST00000309546 STAG3L1P0CL83 205 aa22.03■■□□□ 1.12
LIME1-201ENST00000309546 SFNP31947 248 aa22.03■■□□□ 1.12
LIME1-201ENST00000309546 AK2P54819 239 aa22.03■■□□□ 1.12
LIME1-201ENST00000309546 ANAPC15P60006 121 aa22.03■■□□□ 1.12
LIME1-201ENST00000309546 Q4G0T1 1027 aa22.03■■□□□ 1.12
LIME1-201ENST00000309546 PAN2Q504Q3 1202 aaKnown RBP22.03■■□□□ 1.12
LIME1-201ENST00000309546 TIGD5Q53EQ6 642 aa22.03■■□□□ 1.12
LIME1-201ENST00000309546 MIER3Q7Z3K6 550 aa22.03■■□□□ 1.12
LIME1-201ENST00000309546 KRT25Q7Z3Z0 450 aa22.03■■□□□ 1.12
LIME1-201ENST00000309546 ZNF689Q96CS4 500 aaPredicted RBP22.03■■□□□ 1.12
LIME1-201ENST00000309546 UBE2ZQ9H832 354 aaPredicted RBP22.03■■□□□ 1.12
LIME1-201ENST00000309546 ERVK-5Q9HDB9 667 aa22.03■■□□□ 1.12
LIME1-201ENST00000309546 LRFN2Q9ULH4 789 aa22.03■■□□□ 1.12
LIME1-201ENST00000309546 BRWD1Q9NSI6 2320 aa22.02■■□□□ 1.12
LIME1-201ENST00000309546 PFKFB2O60825 505 aa22.02■■□□□ 1.12
LIME1-201ENST00000309546 XBP1P17861 261 aa22.02■■□□□ 1.12
LIME1-201ENST00000309546 BMPR1AP36894 532 aa22.02■■□□□ 1.12
LIME1-201ENST00000309546 FAM177A1Q8N128 213 aaPredicted RBP22.02■■□□□ 1.12
LIME1-201ENST00000309546 LRRC71Q8N4P6 559 aa22.02■■□□□ 1.12
LIME1-201ENST00000309546 BANK1Q8NDB2 785 aa22.02■■□□□ 1.12
LIME1-201ENST00000309546 MAP7D2Q96T17 732 aa22.02■■□□□ 1.12
LIME1-201ENST00000309546 C11orf84Q9BUA3 381 aaPredicted RBP22.02■■□□□ 1.12
LIME1-201ENST00000309546 NRBP2Q9NSY0 501 aa22.02■■□□□ 1.12
LIME1-201ENST00000309546 DDX25Q9UHL0 483 aaKnown RBP22.02■■□□□ 1.12
LIME1-201ENST00000309546 ST3GAL5Q9UNP4 418 aa22.02■■□□□ 1.12
LIME1-201ENST00000309546 AKT3Q9Y243 479 aa22.02■■□□□ 1.12
LIME1-201ENST00000309546 STK36Q9NRP7 1315 aa22.02■■□□□ 1.12
LIME1-201ENST00000309546 CCDC194A0A1B0GVG4 234 aa22.01■■□□□ 1.11
LIME1-201ENST00000309546 DENND3A2RUS2 1198 aa22.01■■□□□ 1.11
LIME1-201ENST00000309546 MAGEB2O15479 319 aa22.01■■□□□ 1.11
LIME1-201ENST00000309546 MGEA5O60502 916 aa22.01■■□□□ 1.11
LIME1-201ENST00000309546 LINC00271P0C7V0 271 aa22.01■■□□□ 1.11
LIME1-201ENST00000309546 GATMP50440 423 aa22.01■■□□□ 1.11
LIME1-201ENST00000309546 ANKRD1Q15327 319 aa22.01■■□□□ 1.11
LIME1-201ENST00000309546 ODR4Q5SWX8 454 aa22.01■■□□□ 1.11
LIME1-201ENST00000309546 EFCAB12Q6NXP0 572 aa22.01■■□□□ 1.11
LIME1-201ENST00000309546 CMTR2Q8IYT2 770 aaKnown RBP22.01■■□□□ 1.11
LIME1-201ENST00000309546 PHF20Q9BVI0 1012 aa22.01■■□□□ 1.11
LIME1-201ENST00000309546 GJB4Q9NTQ9 266 aa22.01■■□□□ 1.11
Retrieved 100 of 20,778 RNA–protein pairs in 17.7 ms