RNA–Protein interactions for RNA: ENST00000286307.5

LSM11-201, Transcript of LSM11, U7 small nuclear RNA associated, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene LSM11, Length 6,584 nt, Biotype protein coding, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
LSM11-201ENST00000286307 MAN2A1Q16706 1144 aa20.79■□□□□ 0.92
LSM11-201ENST00000286307 SRPRBQ9Y5M8 271 aaKnown RBP20.79■□□□□ 0.92
LSM11-201ENST00000286307 E9PMD0 336 aa20.79■□□□□ 0.92
LSM11-201ENST00000286307 SNX1Q13596 522 aa20.79■□□□□ 0.92
LSM11-201ENST00000286307 DARS2Q6PI48 645 aaKnown RBP20.79■□□□□ 0.92
LSM11-201ENST00000286307 SIRT2Q8IXJ6 389 aa20.79■□□□□ 0.92
LSM11-201ENST00000286307 FAM20AQ96MK3 541 aa20.79■□□□□ 0.92
LSM11-201ENST00000286307 YWHAGP61981 247 aaKnown RBP eCLIP20.79■□□□□ 0.92
LSM11-201ENST00000286307 C12orf60Q5U649 245 aa20.79■□□□□ 0.92
LSM11-201ENST00000286307 HPCAL4Q9UM19 191 aa20.79■□□□□ 0.92
LSM11-201ENST00000286307 KDM6AO15550 1401 aaPredicted RBP20.79■□□□□ 0.92
LSM11-201ENST00000286307 CIB2O75838 187 aa20.79■□□□□ 0.92
LSM11-201ENST00000286307 PAK2Q13177 524 aa20.79■□□□□ 0.92
LSM11-201ENST00000286307 TUBB2AQ13885 445 aa20.79■□□□□ 0.92
LSM11-201ENST00000286307 ARHGEF18Q6ZSZ5 1173 aa20.79■□□□□ 0.92
LSM11-201ENST00000286307 GLYCTKQ8IVS8 523 aa20.79■□□□□ 0.92
LSM11-201ENST00000286307 TRMT2AQ8IZ69 625 aaKnown RBP20.79■□□□□ 0.92
LSM11-201ENST00000286307 ALKBH8Q96BT7 664 aaKnown RBP20.79■□□□□ 0.92
LSM11-201ENST00000286307 TUBB2BQ9BVA1 445 aa20.79■□□□□ 0.92
LSM11-201ENST00000286307 ZWILCHQ9H900 591 aa20.79■□□□□ 0.92
LSM11-201ENST00000286307 POTEB3A0JP26 581 aa20.78■□□□□ 0.92
LSM11-201ENST00000286307 POTECB2RU33 542 aa20.78■□□□□ 0.92
LSM11-201ENST00000286307 NFKBIAP25963 317 aa20.78■□□□□ 0.92
LSM11-201ENST00000286307 GARSP41250 739 aaKnown RBP20.78■□□□□ 0.92
LSM11-201ENST00000286307 SF3A3Q12874 501 aaKnown RBP eCLIP20.78■□□□□ 0.92
LSM11-201ENST00000286307 POTEBQ6S5H4 581 aa20.78■□□□□ 0.92
LSM11-201ENST00000286307 STAG2Q8N3U4 1231 aa20.78■□□□□ 0.92
LSM11-201ENST00000286307 SUCLA2Q9P2R7 463 aaPredicted RBP20.78■□□□□ 0.92
LSM11-201ENST00000286307 MAN1B1Q9UKM7 699 aa20.78■□□□□ 0.92
LSM11-201ENST00000286307 SFR1Q86XK3 245 aa20.78■□□□□ 0.92
LSM11-201ENST00000286307 RNF149Q8NC42 400 aa20.78■□□□□ 0.92
LSM11-201ENST00000286307 MCUQ8NE86 351 aa20.78■□□□□ 0.92
LSM11-201ENST00000286307 MCF2LO15068 1137 aa20.78■□□□□ 0.92
LSM11-201ENST00000286307 YY1P25490 414 aa20.78■□□□□ 0.92
LSM11-201ENST00000286307 RILPQ96NA2 401 aa20.78■□□□□ 0.92
LSM11-201ENST00000286307 MRPL47Q9HD33 250 aaKnown RBP20.78■□□□□ 0.92
LSM11-201ENST00000286307 FRMD4AQ9P2Q2 1039 aaPredicted RBP20.78■□□□□ 0.92
LSM11-201ENST00000286307 ARHGEF40Q8TER5 1519 aa20.78■□□□□ 0.92
LSM11-201ENST00000286307 NEDD1Q8NHV4 660 aa20.78■□□□□ 0.92
LSM11-201ENST00000286307 HDAC11Q96DB2 347 aa20.78■□□□□ 0.92
LSM11-201ENST00000286307 SLC25A27O95847 323 aa20.78■□□□□ 0.92
LSM11-201ENST00000286307 GUCY2FP51841 1108 aa20.78■□□□□ 0.92
LSM11-201ENST00000286307 TRIM28Q13263 835 aaKnown RBP20.78■□□□□ 0.92
LSM11-201ENST00000286307 PKP1Q13835 747 aa20.78■□□□□ 0.92
LSM11-201ENST00000286307 IER5Q5VY09 327 aa20.78■□□□□ 0.92
LSM11-201ENST00000286307 MAP1SQ66K74 1059 aaPredicted RBP20.78■□□□□ 0.92
LSM11-201ENST00000286307 PPRC1Q5VV67 1664 aaKnown RBP20.77■□□□□ 0.92
LSM11-201ENST00000286307 CTNND1O60716 968 aaKnown RBP20.77■□□□□ 0.92
LSM11-201ENST00000286307 CACNB2Q08289 660 aaPredicted RBP20.77■□□□□ 0.92
LSM11-201ENST00000286307 TKFCQ3LXA3 575 aa20.77■□□□□ 0.92
LSM11-201ENST00000286307 SPATA24Q86W54 205 aa20.77■□□□□ 0.92
LSM11-201ENST00000286307 PCDHA10Q9Y5I2 948 aa20.77■□□□□ 0.92
LSM11-201ENST00000286307 POTEFA5A3E0 1075 aa20.77■□□□□ 0.92
LSM11-201ENST00000286307 POTEIP0CG38 1075 aa20.77■□□□□ 0.92
LSM11-201ENST00000286307 ADORA2BP29275 332 aa20.77■□□□□ 0.92
LSM11-201ENST00000286307 GKAP1Q5VSY0 366 aaPredicted RBP20.77■□□□□ 0.92
LSM11-201ENST00000286307 POTEGQ6S5H5 508 aa20.77■□□□□ 0.92
LSM11-201ENST00000286307 POTEEQ6S8J3 1075 aa20.77■□□□□ 0.92
LSM11-201ENST00000286307 PGBD3Q8N328 593 aa20.77■□□□□ 0.92
LSM11-201ENST00000286307 ATP6V1E2Q96A05 226 aa20.77■□□□□ 0.92
LSM11-201ENST00000286307 LY9Q9HBG7 655 aa20.77■□□□□ 0.92
LSM11-201ENST00000286307 NDUFB10O96000 172 aa20.77■□□□□ 0.92
LSM11-201ENST00000286307 KRT222Q8N1A0 295 aa20.77■□□□□ 0.92
LSM11-201ENST00000286307 NGRNQ9NPE2 291 aaKnown RBP20.77■□□□□ 0.92
LSM11-201ENST00000286307 FAM217BQ9NTX9 383 aaPredicted RBP20.77■□□□□ 0.92
LSM11-201ENST00000286307 MB21D1Q8N884 522 aa20.77■□□□□ 0.92
LSM11-201ENST00000286307 CDKL2Q92772 493 aa20.77■□□□□ 0.92
LSM11-201ENST00000286307 GJB4Q9NTQ9 266 aa20.77■□□□□ 0.92
LSM11-201ENST00000286307 SAR1BQ9Y6B6 198 aa20.77■□□□□ 0.92
LSM11-201ENST00000286307 TUBBP07437 444 aa20.77■□□□□ 0.91
LSM11-201ENST00000286307 SLFN14P0C7P3 912 aa20.77■□□□□ 0.91
LSM11-201ENST00000286307 RGS2P41220 211 aa20.77■□□□□ 0.91
LSM11-201ENST00000286307 KSR1Q8IVT5 923 aa20.77■□□□□ 0.91
LSM11-201ENST00000286307 ANKRD42Q8N9B4 389 aa20.77■□□□□ 0.91
LSM11-201ENST00000286307 PLA2G12BQ9BX93 195 aa20.77■□□□□ 0.91
LSM11-201ENST00000286307 PCDHB7Q9Y5E2 793 aa20.77■□□□□ 0.91
LSM11-201ENST00000286307 THOC5Q13769 683 aaKnown RBP20.76■□□□□ 0.91
LSM11-201ENST00000286307 PAGE5Q96GU1 130 aa20.76■□□□□ 0.91
LSM11-201ENST00000286307 ATN1P54259 1190 aaPredicted RBP20.76■□□□□ 0.91
LSM11-201ENST00000286307 ZNF131P52739 623 aa20.76■□□□□ 0.91
LSM11-201ENST00000286307 RPS6KA5O75582 802 aa20.76■□□□□ 0.91
LSM11-201ENST00000286307 PASD1Q8IV76 773 aa20.76■□□□□ 0.91
LSM11-201ENST00000286307 SUDS3Q9H7L9 328 aaPredicted RBP20.76■□□□□ 0.91
LSM11-201ENST00000286307 NEXMIFQ5QGS0 1516 aa20.76■□□□□ 0.91
LSM11-201ENST00000286307 CPT1AP50416 773 aa20.76■□□□□ 0.91
LSM11-201ENST00000286307 SATB1Q01826 763 aa20.76■□□□□ 0.91
LSM11-201ENST00000286307 PTPN21Q16825 1174 aa20.76■□□□□ 0.91
LSM11-201ENST00000286307 GLT1D1Q96MS3 346 aa20.76■□□□□ 0.91
LSM11-201ENST00000286307 MMTAG2Q9BU76 263 aaKnown RBP20.76■□□□□ 0.91
LSM11-201ENST00000286307 BARHL2Q9NY43 387 aa20.76■□□□□ 0.91
LSM11-201ENST00000286307 HYOU1Q9Y4L1 999 aa20.76■□□□□ 0.91
LSM11-201ENST00000286307 SLC10A5Q5PT55 438 aa20.75■□□□□ 0.91
LSM11-201ENST00000286307 INTS5Q6P9B9 1019 aaKnown RBP20.75■□□□□ 0.91
LSM11-201ENST00000286307 CAPN2P17655 700 aa20.75■□□□□ 0.91
LSM11-201ENST00000286307 SOX5P35711 763 aa20.75■□□□□ 0.91
LSM11-201ENST00000286307 EHHADHQ08426 723 aa20.75■□□□□ 0.91
LSM11-201ENST00000286307 N4BP2L2Q92802 583 aaPredicted RBP20.75■□□□□ 0.91
LSM11-201ENST00000286307 SMARCAD1Q9H4L7 1026 aa20.75■□□□□ 0.91
LSM11-201ENST00000286307 GRIK1P39086 918 aa20.75■□□□□ 0.91
LSM11-201ENST00000286307 CCDC13Q8IYE1 715 aa20.75■□□□□ 0.91
Retrieved 100 of 20,778 RNA–protein pairs in 27.2 ms