RNA–Protein interactions for RNA: ENST00000284637.13

SH3RF1-201, Transcript of SH3 domain containing ring finger 1, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene SH3RF1, Length 5,272 nt, Biotype protein coding, Subcellular localisation Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SH3RF1-201ENST00000284637 KCNQ4P56696 695 aa17.67■□□□□ 0.42
SH3RF1-201ENST00000284637 SNAP25P60880 206 aa17.67■□□□□ 0.42
SH3RF1-201ENST00000284637 PIGOQ8TEQ8 1089 aa17.67■□□□□ 0.42
SH3RF1-201ENST00000284637 PPIL4Q8WUA2 492 aaKnown RBP eCLIP17.67■□□□□ 0.42
SH3RF1-201ENST00000284637 OLFM3Q96PB7 478 aa17.67■□□□□ 0.42
SH3RF1-201ENST00000284637 RASA4BC9J798 803 aa17.67■□□□□ 0.42
SH3RF1-201ENST00000284637 RASA4O43374 803 aa17.67■□□□□ 0.42
SH3RF1-201ENST00000284637 CDK8P49336 464 aa17.67■□□□□ 0.42
SH3RF1-201ENST00000284637 STX1BP61266 288 aa17.67■□□□□ 0.42
SH3RF1-201ENST00000284637 GRAMD1BQ3KR37 738 aa17.67■□□□□ 0.42
SH3RF1-201ENST00000284637 FAM83BQ5T0W9 1011 aa17.67■□□□□ 0.42
SH3RF1-201ENST00000284637 DGKHQ86XP1 1220 aa17.67■□□□□ 0.42
SH3RF1-201ENST00000284637 HACE1Q8IYU2 909 aa17.67■□□□□ 0.42
SH3RF1-201ENST00000284637 TTC17Q96AE7 1141 aa17.67■□□□□ 0.42
SH3RF1-201ENST00000284637 PAIP2BQ9ULR5 123 aaKnown RBP17.67■□□□□ 0.42
SH3RF1-201ENST00000284637 SAMD9Q5K651 1589 aa17.67■□□□□ 0.42
SH3RF1-201ENST00000284637 DIAPH2O60879 1101 aa17.67■□□□□ 0.42
SH3RF1-201ENST00000284637 NCAPG2Q86XI2 1143 aa17.67■□□□□ 0.42
SH3RF1-201ENST00000284637 ANLNQ9NQW6 1124 aa17.67■□□□□ 0.42
SH3RF1-201ENST00000284637 UBN2Q6ZU65 1347 aa17.66■□□□□ 0.42
SH3RF1-201ENST00000284637 PP2D1A8MPX8 630 aa17.66■□□□□ 0.42
SH3RF1-201ENST00000284637 NMT2O60551 498 aa17.66■□□□□ 0.42
SH3RF1-201ENST00000284637 RUBCNQ92622 972 aa17.66■□□□□ 0.42
SH3RF1-201ENST00000284637 FUT8Q9BYC5 575 aa17.66■□□□□ 0.42
SH3RF1-201ENST00000284637 LY9Q9HBG7 655 aa17.66■□□□□ 0.42
SH3RF1-201ENST00000284637 CDK12Q9NYV4 1490 aaPredicted RBP17.66■□□□□ 0.42
SH3RF1-201ENST00000284637 MDH1P40925 334 aaKnown RBP17.66■□□□□ 0.42
SH3RF1-201ENST00000284637 RAD23BP54727 409 aa17.66■□□□□ 0.42
SH3RF1-201ENST00000284637 CDC37Q16543 378 aaPredicted RBP17.66■□□□□ 0.42
SH3RF1-201ENST00000284637 SYT2Q8N9I0 419 aaPredicted RBP17.66■□□□□ 0.42
SH3RF1-201ENST00000284637 ANKRD36BP1Q96IX9 119 aa17.66■□□□□ 0.42
SH3RF1-201ENST00000284637 HEG1Q9ULI3 1381 aa17.66■□□□□ 0.42
SH3RF1-201ENST00000284637 STK36Q9NRP7 1315 aa17.66■□□□□ 0.42
SH3RF1-201ENST00000284637 OSTNP61366 133 aa17.66■□□□□ 0.42
SH3RF1-201ENST00000284637 SPARCL1Q14515 664 aa17.66■□□□□ 0.42
SH3RF1-201ENST00000284637 CALR3Q96L12 384 aaKnown RBP17.66■□□□□ 0.42
SH3RF1-201ENST00000284637 PNMA6FA0A0J9YX94 578 aa17.66■□□□□ 0.42
SH3RF1-201ENST00000284637 KCNH2Q12809 1159 aa17.66■□□□□ 0.42
SH3RF1-201ENST00000284637 PFKFB3Q16875 520 aaPredicted RBP17.66■□□□□ 0.42
SH3RF1-201ENST00000284637 SUGP1Q8IWZ8 645 aaKnown RBP17.66■□□□□ 0.42
SH3RF1-201ENST00000284637 C7orf31Q8N865 590 aa17.66■□□□□ 0.42
SH3RF1-201ENST00000284637 ESYT2A0FGR8 921 aa17.65■□□□□ 0.42
SH3RF1-201ENST00000284637 EIF4E1BA6NMX2 242 aaKnown RBP17.65■□□□□ 0.42
SH3RF1-201ENST00000284637 LRRC31Q6UY01 552 aa17.65■□□□□ 0.42
SH3RF1-201ENST00000284637 C4orf50Q6ZRC1 276 aa17.65■□□□□ 0.42
SH3RF1-201ENST00000284637 STAMBPL1Q96FJ0 436 aa17.65■□□□□ 0.42
SH3RF1-201ENST00000284637 ANAPC7Q9UJX3 599 aa17.65■□□□□ 0.42
SH3RF1-201ENST00000284637 TLK1Q9UKI8 766 aa17.65■□□□□ 0.42
SH3RF1-201ENST00000284637 OR6B2Q6IFH4 312 aa17.65■□□□□ 0.42
SH3RF1-201ENST00000284637 KRT80Q6KB66 452 aa17.65■□□□□ 0.42
SH3RF1-201ENST00000284637 ZBTB33Q86T24 672 aa17.65■□□□□ 0.42
SH3RF1-201ENST00000284637 DYDC2Q96IM9 177 aa17.65■□□□□ 0.42
SH3RF1-201ENST00000284637 ERBB3P21860 1342 aa17.65■□□□□ 0.42
SH3RF1-201ENST00000284637 RNF207Q6ZRF8 634 aa17.65■□□□□ 0.42
SH3RF1-201ENST00000284637 PIK3R5Q8WYR1 880 aa17.65■□□□□ 0.42
SH3RF1-201ENST00000284637 SGSM3Q96HU1 749 aa17.65■□□□□ 0.42
SH3RF1-201ENST00000284637 PPARGC1AQ9UBK2 798 aaKnown RBP17.65■□□□□ 0.42
SH3RF1-201ENST00000284637 NCOA3Q9Y6Q9 1424 aa17.65■□□□□ 0.42
SH3RF1-201ENST00000284637 E9PMD0 336 aa17.65■□□□□ 0.42
SH3RF1-201ENST00000284637 GYG2O15488 501 aa17.65■□□□□ 0.42
SH3RF1-201ENST00000284637 PRPSAP1Q14558 356 aa17.65■□□□□ 0.42
SH3RF1-201ENST00000284637 TXNRD1Q16881 649 aa17.65■□□□□ 0.42
SH3RF1-201ENST00000284637 FAM160B1Q5W0V3 765 aa17.65■□□□□ 0.42
SH3RF1-201ENST00000284637 SCARA5Q6ZMJ2 495 aa17.65■□□□□ 0.42
SH3RF1-201ENST00000284637 SFR1Q86XK3 245 aa17.65■□□□□ 0.42
SH3RF1-201ENST00000284637 TEX9Q8N6V9 391 aa17.65■□□□□ 0.42
SH3RF1-201ENST00000284637 ENAHQ8N8S7 591 aaPredicted RBP17.65■□□□□ 0.42
SH3RF1-201ENST00000284637 NBPF3Q9H094 633 aa17.65■□□□□ 0.42
SH3RF1-201ENST00000284637 SLC40A1Q9NP59 571 aa17.65■□□□□ 0.42
SH3RF1-201ENST00000284637 TLR3O15455 904 aaKnown RBP17.64■□□□□ 0.42
SH3RF1-201ENST00000284637 FAM47CQ5HY64 1035 aa17.64■□□□□ 0.42
SH3RF1-201ENST00000284637 SYDE2Q5VT97 1194 aa17.64■□□□□ 0.42
SH3RF1-201ENST00000284637 MYLK4Q86YV6 388 aaPredicted RBP17.64■□□□□ 0.42
SH3RF1-201ENST00000284637 TRIM56Q9BRZ2 755 aaKnown RBP17.64■□□□□ 0.42
SH3RF1-201ENST00000284637 ZWILCHQ9H900 591 aa17.64■□□□□ 0.42
SH3RF1-201ENST00000284637 SH3GLB2Q9NR46 395 aa17.64■□□□□ 0.42
SH3RF1-201ENST00000284637 ROBO2Q9HCK4 1378 aa17.64■□□□□ 0.41
SH3RF1-201ENST00000284637 APOEP02649 317 aa17.64■□□□□ 0.41
SH3RF1-201ENST00000284637 KLC1Q07866 573 aa17.64■□□□□ 0.41
SH3RF1-201ENST00000284637 PLCB4Q15147 1175 aa17.64■□□□□ 0.41
SH3RF1-201ENST00000284637 MTERF2Q49AM1 385 aa17.64■□□□□ 0.41
SH3RF1-201ENST00000284637 SPOPLQ6IQ16 392 aa17.64■□□□□ 0.41
SH3RF1-201ENST00000284637 FAM81BQ96LP2 452 aa17.64■□□□□ 0.41
SH3RF1-201ENST00000284637 ETNK1Q9HBU6 452 aa17.64■□□□□ 0.41
SH3RF1-201ENST00000284637 CSADQ9Y600 493 aa17.64■□□□□ 0.41
SH3RF1-201ENST00000284637 ARHGEF5Q12774 1597 aa17.64■□□□□ 0.41
SH3RF1-201ENST00000284637 IQANK1A0A1B0GTG1 560 aa17.64■□□□□ 0.41
SH3RF1-201ENST00000284637 PMS2P54278 862 aa17.64■□□□□ 0.41
SH3RF1-201ENST00000284637 LRRC14Q15048 493 aa17.64■□□□□ 0.41
SH3RF1-201ENST00000284637 METTL16Q86W50 562 aaKnown RBP17.64■□□□□ 0.41
SH3RF1-201ENST00000284637 SLC38A10Q9HBR0 1119 aa17.64■□□□□ 0.41
SH3RF1-201ENST00000284637 CD248Q9HCU0 757 aa17.64■□□□□ 0.41
SH3RF1-201ENST00000284637 CNOT8Q9UFF9 292 aaKnown RBP17.64■□□□□ 0.41
SH3RF1-201ENST00000284637 HPCAL4Q9UM19 191 aa17.64■□□□□ 0.41
SH3RF1-201ENST00000284637 SYNGAP1Q96PV0 1343 aa17.64■□□□□ 0.41
SH3RF1-201ENST00000284637 OATP04181 439 aa17.64■□□□□ 0.41
SH3RF1-201ENST00000284637 ART3Q13508 389 aa17.64■□□□□ 0.41
SH3RF1-201ENST00000284637 BRIP1Q9BX63 1249 aa17.64■□□□□ 0.41
SH3RF1-201ENST00000284637 TRIM55Q9BYV6 548 aa17.64■□□□□ 0.41
SH3RF1-201ENST00000284637 PRDM15P57071 1507 aaPredicted RBP17.64■□□□□ 0.41
Retrieved 100 of 20,778 RNA–protein pairs in 66.5 ms