RNA–Protein interactions for RNA: ENST00000262213.6

TRAM1-201, Transcript of translocation associated membrane protein 1, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene TRAM1, Length 2,785 nt, Biotype protein coding, Subcellular localisation Cytosol, Endoplasmic reticulum, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TRAM1-201ENST00000262213 GPSM2P81274 684 aa19.01■□□□□ 0.63
TRAM1-201ENST00000262213 CYP4A11Q02928 519 aa19.01■□□□□ 0.63
TRAM1-201ENST00000262213 KCNA1Q09470 495 aa19.01■□□□□ 0.63
TRAM1-201ENST00000262213 ZNF211Q13398 564 aaPredicted RBP19.01■□□□□ 0.63
TRAM1-201ENST00000262213 SFI1A8K8P3 1242 aa19.01■□□□□ 0.63
TRAM1-201ENST00000262213 TULP1O00294 542 aaPredicted RBP19.01■□□□□ 0.63
TRAM1-201ENST00000262213 CLSTN1O94985 981 aa19.01■□□□□ 0.63
TRAM1-201ENST00000262213 ZNF543Q08ER8 600 aa19.01■□□□□ 0.63
TRAM1-201ENST00000262213 MTMR3Q13615 1198 aa19.01■□□□□ 0.63
TRAM1-201ENST00000262213 C10orf76Q5T2E6 689 aa19.01■□□□□ 0.63
TRAM1-201ENST00000262213 DPY19L2P1Q6NXN4 242 aa19.01■□□□□ 0.63
TRAM1-201ENST00000262213 VPS36Q86VN1 386 aa19.01■□□□□ 0.63
TRAM1-201ENST00000262213 REEP2Q9BRK0 252 aa19.01■□□□□ 0.63
TRAM1-201ENST00000262213 PNMA2Q9UL42 364 aa19.01■□□□□ 0.63
TRAM1-201ENST00000262213 GALCP54803 685 aa19■□□□□ 0.63
TRAM1-201ENST00000262213 SNAP25P60880 206 aa19■□□□□ 0.63
TRAM1-201ENST00000262213 FOXR2Q6PJQ5 311 aa19■□□□□ 0.63
TRAM1-201ENST00000262213 CALR3Q96L12 384 aaKnown RBP19■□□□□ 0.63
TRAM1-201ENST00000262213 SELENOSQ9BQE4 189 aa19■□□□□ 0.63
TRAM1-201ENST00000262213 CDCA7Q9BWT1 371 aaPredicted RBP19■□□□□ 0.63
TRAM1-201ENST00000262213 F8VZ95 297 aa19■□□□□ 0.63
TRAM1-201ENST00000262213 CES2O00748 559 aa19■□□□□ 0.63
TRAM1-201ENST00000262213 CHUKO15111 745 aa19■□□□□ 0.63
TRAM1-201ENST00000262213 RASSF9O75901 435 aa19■□□□□ 0.63
TRAM1-201ENST00000262213 HOXD13P35453 343 aa19■□□□□ 0.63
TRAM1-201ENST00000262213 SLC12A3P55017 1021 aa19■□□□□ 0.63
TRAM1-201ENST00000262213 KNOP1Q1ED39 458 aaKnown RBP19■□□□□ 0.63
TRAM1-201ENST00000262213 EDRF1Q3B7T1 1238 aa19■□□□□ 0.63
TRAM1-201ENST00000262213 PRR16Q569H4 304 aa19■□□□□ 0.63
TRAM1-201ENST00000262213 NT5DC3Q86UY8 548 aa19■□□□□ 0.63
TRAM1-201ENST00000262213 GLYCTKQ8IVS8 523 aa19■□□□□ 0.63
TRAM1-201ENST00000262213 BZW2Q9Y6E2 419 aaKnown RBP19■□□□□ 0.63
TRAM1-201ENST00000262213 BTNL10A8MVZ5 291 aa18.99■□□□□ 0.63
TRAM1-201ENST00000262213 CCDC188H7C350 402 aa18.99■□□□□ 0.63
TRAM1-201ENST00000262213 CAND2O75155 1236 aa18.99■□□□□ 0.63
TRAM1-201ENST00000262213 CLK2P49760 499 aaKnown RBP18.99■□□□□ 0.63
TRAM1-201ENST00000262213 GSCP56915 257 aaPredicted RBP18.99■□□□□ 0.63
TRAM1-201ENST00000262213 GRAPQ13588 217 aa18.99■□□□□ 0.63
TRAM1-201ENST00000262213 GIT2Q14161 759 aa18.99■□□□□ 0.63
TRAM1-201ENST00000262213 ANKRD20A8PQ5CZ79 823 aa18.99■□□□□ 0.63
TRAM1-201ENST00000262213 CATSPER3Q86XQ3 398 aa18.99■□□□□ 0.63
TRAM1-201ENST00000262213 GRAPLQ8TC17 118 aaPredicted RBP18.99■□□□□ 0.63
TRAM1-201ENST00000262213 LMBR1Q8WVP7 490 aa18.99■□□□□ 0.63
TRAM1-201ENST00000262213 DGCR8Q8WYQ5 773 aaKnown RBP eCLIP18.99■□□□□ 0.63
TRAM1-201ENST00000262213 GLG1Q92896 1179 aa18.99■□□□□ 0.63
TRAM1-201ENST00000262213 PSMD1Q99460 953 aa18.99■□□□□ 0.63
TRAM1-201ENST00000262213 AMFRQ9UKV5 643 aa18.99■□□□□ 0.63
TRAM1-201ENST00000262213 OPLAHO14841 1288 aa18.99■□□□□ 0.63
TRAM1-201ENST00000262213 BUB1BO60566 1050 aaPredicted RBP18.99■□□□□ 0.63
TRAM1-201ENST00000262213 GCNT3O95395 438 aa18.99■□□□□ 0.63
TRAM1-201ENST00000262213 SHBGP04278 402 aa18.99■□□□□ 0.63
TRAM1-201ENST00000262213 BYSLQ13895 437 aaKnown RBP18.99■□□□□ 0.63
TRAM1-201ENST00000262213 E2F5Q15329 346 aa18.99■□□□□ 0.63
TRAM1-201ENST00000262213 EPHA7Q15375 998 aa18.99■□□□□ 0.63
TRAM1-201ENST00000262213 PPP1R9AQ9ULJ8 1098 aa18.99■□□□□ 0.63
TRAM1-201ENST00000262213 SPDYE3A6NKU9 549 aa18.98■□□□□ 0.63
TRAM1-201ENST00000262213 NR3C1P04150 777 aa18.98■□□□□ 0.63
TRAM1-201ENST00000262213 ZBTB48P10074 688 aaPredicted RBP18.98■□□□□ 0.63
TRAM1-201ENST00000262213 DDR1Q08345 913 aa18.98■□□□□ 0.63
TRAM1-201ENST00000262213 AGBL2Q5U5Z8 902 aa18.98■□□□□ 0.63
TRAM1-201ENST00000262213 GKAP1Q5VSY0 366 aaPredicted RBP18.98■□□□□ 0.63
TRAM1-201ENST00000262213 FRMD5Q7Z6J6 570 aa18.98■□□□□ 0.63
TRAM1-201ENST00000262213 FMO2Q99518 471 aa18.98■□□□□ 0.63
TRAM1-201ENST00000262213 SIX2Q9NPC8 291 aa18.98■□□□□ 0.63
TRAM1-201ENST00000262213 CDK5RAP2Q96SN8 1893 aa18.98■□□□□ 0.63
TRAM1-201ENST00000262213 CTNND1O60716 968 aaKnown RBP18.98■□□□□ 0.63
TRAM1-201ENST00000262213 PLCG2P16885 1265 aa18.98■□□□□ 0.63
TRAM1-201ENST00000262213 HYIQ5T013 277 aa18.98■□□□□ 0.63
TRAM1-201ENST00000262213 CYB5D1Q6P9G0 228 aa18.98■□□□□ 0.63
TRAM1-201ENST00000262213 LNX1Q8TBB1 728 aaPredicted RBP18.98■□□□□ 0.63
TRAM1-201ENST00000262213 SUCLA2Q9P2R7 463 aaPredicted RBP18.98■□□□□ 0.63
TRAM1-201ENST00000262213 IGSF9BQ9UPX0 1349 aa18.98■□□□□ 0.63
TRAM1-201ENST00000262213 UBAP1LF5GYI3 381 aa18.98■□□□□ 0.63
TRAM1-201ENST00000262213 TTLL1O95922 423 aa18.98■□□□□ 0.63
TRAM1-201ENST00000262213 TAL1P17542 331 aaPredicted RBP18.98■□□□□ 0.63
TRAM1-201ENST00000262213 AADACL2Q6P093 401 aa18.98■□□□□ 0.63
TRAM1-201ENST00000262213 PPP4R3CPQ6ZMV5 832 aa18.98■□□□□ 0.63
TRAM1-201ENST00000262213 GIMAP7Q8NHV1 300 aa18.98■□□□□ 0.63
TRAM1-201ENST00000262213 SLC35G2Q8TBE7 412 aa18.98■□□□□ 0.63
TRAM1-201ENST00000262213 SLITRK6Q9H5Y7 841 aa18.98■□□□□ 0.63
TRAM1-201ENST00000262213 ERVK-5Q9HDB9 667 aa18.98■□□□□ 0.63
TRAM1-201ENST00000262213 STXBP5LQ9Y2K9 1186 aa18.98■□□□□ 0.63
TRAM1-201ENST00000262213 ZBTB5O15062 677 aa18.97■□□□□ 0.63
TRAM1-201ENST00000262213 CALUO43852 315 aaPredicted RBP18.97■□□□□ 0.63
TRAM1-201ENST00000262213 GCFC2P16383 781 aaKnown RBP18.97■□□□□ 0.63
TRAM1-201ENST00000262213 SCTRP47872 440 aa18.97■□□□□ 0.63
TRAM1-201ENST00000262213 PLTPP55058 493 aa18.97■□□□□ 0.63
TRAM1-201ENST00000262213 SNCBQ16143 134 aa18.97■□□□□ 0.63
TRAM1-201ENST00000262213 SLC30A10Q6XR72 485 aa18.97■□□□□ 0.63
TRAM1-201ENST00000262213 KSR1Q8IVT5 923 aa18.97■□□□□ 0.63
TRAM1-201ENST00000262213 PARP9Q8IXQ6 854 aa18.97■□□□□ 0.63
TRAM1-201ENST00000262213 ACTR5Q9H9F9 607 aaPredicted RBP18.97■□□□□ 0.63
TRAM1-201ENST00000262213 BCS1LQ9Y276 419 aa18.97■□□□□ 0.63
TRAM1-201ENST00000262213 EPB41L3Q9Y2J2 1087 aaPredicted RBP18.97■□□□□ 0.63
TRAM1-201ENST00000262213 SNX24Q9Y343 169 aa18.97■□□□□ 0.63
TRAM1-201ENST00000262213 EVI5O60447 810 aa18.97■□□□□ 0.63
TRAM1-201ENST00000262213 CCDC172P0C7W6 258 aa18.97■□□□□ 0.63
TRAM1-201ENST00000262213 KRT13P13646 458 aa18.97■□□□□ 0.63
TRAM1-201ENST00000262213 SYCE1Q8N0S2 351 aa18.97■□□□□ 0.63
TRAM1-201ENST00000262213 FUKQ8N0W3 1084 aa18.97■□□□□ 0.63
Retrieved 100 of 20,778 RNA–protein pairs in 27.6 ms