RNA–Protein interactions for RNA: ENST00000258772.9

DDX56-201, Transcript of DEAD-box helicase 56, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene DDX56, Length 2,336 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
DDX56-201ENST00000258772 NPR1P16066 1061 aa16.66■□□□□ 0.26
DDX56-201ENST00000258772 JAM2P57087 298 aa16.66■□□□□ 0.26
DDX56-201ENST00000258772 KCNA1Q09470 495 aa16.66■□□□□ 0.26
DDX56-201ENST00000258772 TUBB8Q3ZCM7 444 aa16.66■□□□□ 0.26
DDX56-201ENST00000258772 KIAA0825Q8IV33 1275 aa16.66■□□□□ 0.26
DDX56-201ENST00000258772 KLHL7Q8IXQ5 586 aa16.66■□□□□ 0.26
DDX56-201ENST00000258772 GMCL1P1Q8NEA9 526 aa16.66■□□□□ 0.26
DDX56-201ENST00000258772 BCAS4Q8TDM0 211 aa16.66■□□□□ 0.26
DDX56-201ENST00000258772 SCFD2Q8WU76 684 aa16.66■□□□□ 0.26
DDX56-201ENST00000258772 EIF2AK1Q9BQI3 630 aaKnown RBP16.66■□□□□ 0.26
DDX56-201ENST00000258772 NENFQ9UMX5 172 aa16.66■□□□□ 0.26
DDX56-201ENST00000258772 EML1O00423 815 aa16.65■□□□□ 0.26
DDX56-201ENST00000258772 CLIC2O15247 247 aa16.65■□□□□ 0.26
DDX56-201ENST00000258772 TBCAO75347 108 aaKnown RBP16.65■□□□□ 0.26
DDX56-201ENST00000258772 NDUFB10O96000 172 aa16.65■□□□□ 0.26
DDX56-201ENST00000258772 ANXA13P27216 316 aa16.65■□□□□ 0.26
DDX56-201ENST00000258772 CCT5P48643 541 aa16.65■□□□□ 0.26
DDX56-201ENST00000258772 IKQ13123 557 aaPredicted RBP16.65■□□□□ 0.26
DDX56-201ENST00000258772 SYDE2Q5VT97 1194 aa16.65■□□□□ 0.26
DDX56-201ENST00000258772 KCTD16Q68DU8 428 aa16.65■□□□□ 0.26
DDX56-201ENST00000258772 TTC19Q6DKK2 380 aaPredicted RBP16.65■□□□□ 0.26
DDX56-201ENST00000258772 PODNQ7Z5L7 613 aa16.65■□□□□ 0.26
DDX56-201ENST00000258772 CD302Q8IX05 232 aa16.65■□□□□ 0.26
DDX56-201ENST00000258772 TPCN2Q8NHX9 752 aa16.65■□□□□ 0.26
DDX56-201ENST00000258772 ACTRT1Q8TDG2 376 aa16.65■□□□□ 0.26
DDX56-201ENST00000258772 GMCL1Q96IK5 515 aa16.65■□□□□ 0.26
DDX56-201ENST00000258772 DBNDD1Q9H9R9 158 aa16.65■□□□□ 0.26
DDX56-201ENST00000258772 RGL1Q9NZL6 768 aa16.65■□□□□ 0.26
DDX56-201ENST00000258772 AJAP1Q9UKB5 411 aaPredicted RBP16.65■□□□□ 0.26
DDX56-201ENST00000258772 RABGAP1Q9Y3P9 1069 aa16.65■□□□□ 0.26
DDX56-201ENST00000258772 OPLAHO14841 1288 aa16.65■□□□□ 0.26
DDX56-201ENST00000258772 GDF11O95390 407 aa16.65■□□□□ 0.26
DDX56-201ENST00000258772 TAL1P17542 331 aaPredicted RBP16.65■□□□□ 0.26
DDX56-201ENST00000258772 ALDH1B1P30837 517 aa16.65■□□□□ 0.26
DDX56-201ENST00000258772 HOXA13P31271 388 aaPredicted RBP16.65■□□□□ 0.26
DDX56-201ENST00000258772 SH2D3CQ8N5H7 860 aa16.65■□□□□ 0.26
DDX56-201ENST00000258772 GCNT4Q9P109 453 aa16.65■□□□□ 0.26
DDX56-201ENST00000258772 PCDHB13Q9Y5F0 798 aa16.65■□□□□ 0.26
DDX56-201ENST00000258772 TGFB1I1O43294 461 aa16.64■□□□□ 0.25
DDX56-201ENST00000258772 CEP104O60308 925 aa16.64■□□□□ 0.25
DDX56-201ENST00000258772 CYP3A4P08684 503 aa16.64■□□□□ 0.25
DDX56-201ENST00000258772 ZBTB48P10074 688 aaPredicted RBP16.64■□□□□ 0.25
DDX56-201ENST00000258772 ZNF76P36508 570 aa16.64■□□□□ 0.25
DDX56-201ENST00000258772 RBM5P52756 815 aaKnown RBP eCLIP16.64■□□□□ 0.25
DDX56-201ENST00000258772 TMEM132AQ24JP5 1023 aa16.64■□□□□ 0.25
DDX56-201ENST00000258772 ABCB5Q2M3G0 1257 aa16.64■□□□□ 0.25
DDX56-201ENST00000258772 RINT1Q6NUQ1 792 aa16.64■□□□□ 0.25
DDX56-201ENST00000258772 VPS36Q86VN1 386 aa16.64■□□□□ 0.25
DDX56-201ENST00000258772 CNKSR2Q8WXI2 1034 aa16.64■□□□□ 0.25
DDX56-201ENST00000258772 DGCR8Q8WYQ5 773 aaKnown RBP eCLIP16.64■□□□□ 0.25
DDX56-201ENST00000258772 BORCS6Q96GS4 357 aa16.64■□□□□ 0.25
DDX56-201ENST00000258772 ISCUQ9H1K1 167 aa16.64■□□□□ 0.25
DDX56-201ENST00000258772 TAF1DQ9H5J8 278 aaPredicted RBP16.64■□□□□ 0.25
DDX56-201ENST00000258772 OLFML3Q9NRN5 406 aa16.64■□□□□ 0.25
DDX56-201ENST00000258772 ATP8B3O60423 1300 aa16.64■□□□□ 0.25
DDX56-201ENST00000258772 GTPBP10A4D1E9 387 aaKnown RBP16.64■□□□□ 0.25
DDX56-201ENST00000258772 SFI1A8K8P3 1242 aa16.64■□□□□ 0.25
DDX56-201ENST00000258772 EBAG9O00559 213 aa16.64■□□□□ 0.25
DDX56-201ENST00000258772 H2AFZP0C0S5 128 aa16.64■□□□□ 0.25
DDX56-201ENST00000258772 BMP3P12645 472 aa16.64■□□□□ 0.25
DDX56-201ENST00000258772 POLD1P28340 1107 aa16.64■□□□□ 0.25
DDX56-201ENST00000258772 GJB7Q6PEY0 223 aa16.64■□□□□ 0.25
DDX56-201ENST00000258772 H2AFVQ71UI9 128 aa16.64■□□□□ 0.25
DDX56-201ENST00000258772 EIF1ADQ8N9N8 165 aaKnown RBP16.64■□□□□ 0.25
DDX56-201ENST00000258772 NRXN2Q9P2S2 1712 aa16.63■□□□□ 0.25
DDX56-201ENST00000258772 UBAP1LF5GYI3 381 aa16.63■□□□□ 0.25
DDX56-201ENST00000258772 GAP43P17677 238 aa16.63■□□□□ 0.25
DDX56-201ENST00000258772 HSPA9P38646 679 aaKnown RBP16.63■□□□□ 0.25
DDX56-201ENST00000258772 ERVK-9P63128 1117 aa16.63■□□□□ 0.25
DDX56-201ENST00000258772 SLFN11Q7Z7L1 901 aa16.63■□□□□ 0.25
DDX56-201ENST00000258772 KCTD17Q8N5Z5 321 aa16.63■□□□□ 0.25
DDX56-201ENST00000258772 METTL13Q8N6R0 699 aa16.63■□□□□ 0.25
DDX56-201ENST00000258772 LMBR1Q8WVP7 490 aa16.63■□□□□ 0.25
DDX56-201ENST00000258772 CALR3Q96L12 384 aaKnown RBP16.63■□□□□ 0.25
DDX56-201ENST00000258772 HSD17B14Q9BPX1 270 aa16.63■□□□□ 0.25
DDX56-201ENST00000258772 TMX4Q9H1E5 349 aaPredicted RBP16.63■□□□□ 0.25
DDX56-201ENST00000258772 RABEP2Q9H5N1 569 aa16.63■□□□□ 0.25
DDX56-201ENST00000258772 INTUQ9ULD6 942 aa16.63■□□□□ 0.25
DDX56-201ENST00000258772 A0A0A6YYK5 440 aaPredicted RBP16.63■□□□□ 0.25
DDX56-201ENST00000258772 SHTN1A0MZ66 631 aa16.63■□□□□ 0.25
DDX56-201ENST00000258772 DDX3XO00571 662 aaKnown RBP eCLIP16.63■□□□□ 0.251e-7■■■■□ 23.6
DDX56-201ENST00000258772 PTPROQ16827 1216 aa16.63■□□□□ 0.25
DDX56-201ENST00000258772 EMC10Q5UCC4 262 aa16.63■□□□□ 0.25
DDX56-201ENST00000258772 BTNL9Q6UXG8 535 aa16.63■□□□□ 0.25
DDX56-201ENST00000258772 PIGOQ8TEQ8 1089 aa16.63■□□□□ 0.25
DDX56-201ENST00000258772 BUD13Q9BRD0 619 aaKnown RBP eCLIP16.63■□□□□ 0.259e-8■■■□□ 14.7
DDX56-201ENST00000258772 SPATA31A6Q5VVP1 1343 aa16.62■□□□□ 0.25
DDX56-201ENST00000258772 IGLV3-22A0A075B6J6 115 aa16.62■□□□□ 0.25
DDX56-201ENST00000258772 EIF3DO15371 548 aaKnown RBP eCLIP16.62■□□□□ 0.25
DDX56-201ENST00000258772 NPM3O75607 178 aaKnown RBP16.62■□□□□ 0.25
DDX56-201ENST00000258772 ATP1A2P50993 1020 aa16.62■□□□□ 0.25
DDX56-201ENST00000258772 HDLBPQ00341 1268 aaKnown RBP16.62■□□□□ 0.25
DDX56-201ENST00000258772 PDCLQ13371 301 aa16.62■□□□□ 0.25
DDX56-201ENST00000258772 CTTNQ14247 550 aaKnown RBP16.62■□□□□ 0.25
DDX56-201ENST00000258772 KDM7AQ6ZMT4 941 aa16.62■□□□□ 0.25
DDX56-201ENST00000258772 PEX26Q7Z412 305 aa16.62■□□□□ 0.25
DDX56-201ENST00000258772 C1orf131Q8NDD1 294 aaKnown RBP16.62■□□□□ 0.25
DDX56-201ENST00000258772 STXBP5LQ9Y2K9 1186 aa16.62■□□□□ 0.25
DDX56-201ENST00000258772 TMCO5BA8MYB1 307 aa16.62■□□□□ 0.25
DDX56-201ENST00000258772 PGRMC1O00264 195 aaKnown RBP16.62■□□□□ 0.25
Retrieved 100 of 20,778 RNA–protein pairs in 453.7 ms