RNA–Protein interactions for RNA: ENST00000235372.11

PRDM2-201, Transcript of PR/SET domain 2, humanhuman

APPRIS P4 TSL 1 (best) BASIC

Gene PRDM2, Length 7,957 nt, Biotype protein coding, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PRDM2-201ENST00000235372 CNOT10Q9H9A5 744 aaKnown RBP8.05□□□□□ -1.12
PRDM2-201ENST00000235372 TBK1Q9UHD2 729 aa8.05□□□□□ -1.12
PRDM2-201ENST00000235372 KCNJ14Q9UNX9 436 aa8.05□□□□□ -1.12
PRDM2-201ENST00000235372 APOBEC2Q9Y235 224 aaKnown RBP8.05□□□□□ -1.12
PRDM2-201ENST00000235372 WDR97A6NE52 1622 aa8.05□□□□□ -1.12
PRDM2-201ENST00000235372 PI4K2BG5E9Z4 385 aa8.05□□□□□ -1.12
PRDM2-201ENST00000235372 RASSF7Q02833 373 aa8.05□□□□□ -1.12
PRDM2-201ENST00000235372 TNNI3KQ59H18 835 aa8.05□□□□□ -1.12
PRDM2-201ENST00000235372 ANKS6Q68DC2 871 aa8.05□□□□□ -1.12
PRDM2-201ENST00000235372 KLHL24Q6TFL4 600 aa8.05□□□□□ -1.12
PRDM2-201ENST00000235372 PPIP5K1Q6PFW1 1433 aa8.05□□□□□ -1.12
PRDM2-201ENST00000235372 SNTNA6NMZ2 147 aa8.05□□□□□ -1.12
PRDM2-201ENST00000235372 ST8SIA6P61647 398 aa8.05□□□□□ -1.12
PRDM2-201ENST00000235372 CDO1Q16878 200 aa8.05□□□□□ -1.12
PRDM2-201ENST00000235372 CYTH2Q99418 400 aa8.05□□□□□ -1.12
PRDM2-201ENST00000235372 NCOA1Q15788 1441 aa8.05□□□□□ -1.12
PRDM2-201ENST00000235372 ZNF532Q9HCE3 1301 aa8.05□□□□□ -1.12
PRDM2-201ENST00000235372 IKBKBO14920 756 aa8.05□□□□□ -1.12
PRDM2-201ENST00000235372 PSMA4P25789 261 aaKnown RBP8.05□□□□□ -1.12
PRDM2-201ENST00000235372 C6orf118Q5T5N4 469 aa8.05□□□□□ -1.12
PRDM2-201ENST00000235372 C20orf194Q5TEA3 1177 aa8.05□□□□□ -1.12
PRDM2-201ENST00000235372 TAS2R42Q7RTR8 314 aa8.05□□□□□ -1.12
PRDM2-201ENST00000235372 LUZP2Q86TE4 346 aa8.05□□□□□ -1.12
PRDM2-201ENST00000235372 NT5DC4Q86YG4 428 aa8.05□□□□□ -1.12
PRDM2-201ENST00000235372 ZNF555Q8NEP9 628 aa8.05□□□□□ -1.12
PRDM2-201ENST00000235372 VMP1Q96GC9 406 aa8.05□□□□□ -1.12
PRDM2-201ENST00000235372 ZSCAN10Q96SZ4 725 aaPredicted RBP8.05□□□□□ -1.12
PRDM2-201ENST00000235372 hCG_2014768A0A024R1R8 64 aa8.05□□□□□ -1.12
PRDM2-201ENST00000235372 RNF103-CHMP3A0A140T963 221 aa8.05□□□□□ -1.12
PRDM2-201ENST00000235372 EIF4E1BA6NMX2 242 aaKnown RBP8.05□□□□□ -1.12
PRDM2-201ENST00000235372 GOLGA8TH3BQL2 631 aa8.05□□□□□ -1.12
PRDM2-201ENST00000235372 CYBBP04839 570 aa8.05□□□□□ -1.12
PRDM2-201ENST00000235372 PSAPP07602 524 aa8.05□□□□□ -1.12
PRDM2-201ENST00000235372 GOLGA8HP0CJ92 632 aa8.05□□□□□ -1.12
PRDM2-201ENST00000235372 C4BPBP20851 252 aa8.05□□□□□ -1.12
PRDM2-201ENST00000235372 NCKAP1LP55160 1127 aa8.05□□□□□ -1.12
PRDM2-201ENST00000235372 FAM133BQ5BKY9 247 aaKnown RBP8.05□□□□□ -1.12
PRDM2-201ENST00000235372 WDR75Q8IWA0 830 aaKnown RBP8.05□□□□□ -1.12
PRDM2-201ENST00000235372 SREK1IP1Q8N9Q2 155 aaPredicted RBP8.05□□□□□ -1.12
PRDM2-201ENST00000235372 OR6B3Q8NGW1 331 aa8.05□□□□□ -1.12
PRDM2-201ENST00000235372 CNKSR1Q969H4 720 aa8.05□□□□□ -1.12
PRDM2-201ENST00000235372 TSEN34Q9BSV6 310 aaKnown RBP8.05□□□□□ -1.12
PRDM2-201ENST00000235372 GCOM2Q9BZD3 368 aaPredicted RBP8.05□□□□□ -1.12
PRDM2-201ENST00000235372 MTIF3Q9H2K0 278 aaKnown RBP8.05□□□□□ -1.12
PRDM2-201ENST00000235372 KRCC1Q9NPI7 259 aaPredicted RBP8.05□□□□□ -1.12
PRDM2-201ENST00000235372 USE1Q9NZ43 259 aa8.05□□□□□ -1.12
PRDM2-201ENST00000235372 MYH7BA7E2Y1 1941 aa8.05□□□□□ -1.12
PRDM2-201ENST00000235372 SOS1Q07889 1333 aaPredicted RBP8.05□□□□□ -1.12
PRDM2-201ENST00000235372 ASXL1Q8IXJ9 1541 aa8.05□□□□□ -1.12
PRDM2-201ENST00000235372 TMEM232C9JQI7 657 aa8.05□□□□□ -1.12
PRDM2-201ENST00000235372 HNRNPRO43390 633 aaKnown RBP8.05□□□□□ -1.12
PRDM2-201ENST00000235372 SUPT3HO75486 399 aa8.05□□□□□ -1.12
PRDM2-201ENST00000235372 TJP3O95049 919 aa8.05□□□□□ -1.12
PRDM2-201ENST00000235372 KRT14P02533 472 aa8.05□□□□□ -1.12
PRDM2-201ENST00000235372 AFPP02771 609 aaKnown RBP8.05□□□□□ -1.12
PRDM2-201ENST00000235372 S100A5P33763 92 aa8.05□□□□□ -1.12
PRDM2-201ENST00000235372 PPARAQ07869 468 aa8.05□□□□□ -1.12
PRDM2-201ENST00000235372 IFT88Q13099 833 aa8.05□□□□□ -1.12
PRDM2-201ENST00000235372 DYNC1I2Q13409 638 aaKnown RBP8.05□□□□□ -1.12
PRDM2-201ENST00000235372 TRIP4Q15650 581 aaPredicted RBP8.05□□□□□ -1.12
PRDM2-201ENST00000235372 SNX30Q5VWJ9 437 aa8.05□□□□□ -1.12
PRDM2-201ENST00000235372 ARHGEF25Q86VW2 580 aa8.05□□□□□ -1.12
PRDM2-201ENST00000235372 GJA10Q969M2 543 aa8.05□□□□□ -1.12
PRDM2-201ENST00000235372 MAGEF1Q9HAY2 307 aa8.05□□□□□ -1.12
PRDM2-201ENST00000235372 FBXL5Q9UKA1 691 aa8.05□□□□□ -1.12
PRDM2-201ENST00000235372 GOLGA8IPA6NC78 632 aa8.04□□□□□ -1.12
PRDM2-201ENST00000235372 PCF11O94913 1555 aaKnown RBP8.04□□□□□ -1.12
PRDM2-201ENST00000235372 HOXA7P31268 230 aaPredicted RBP8.04□□□□□ -1.12
PRDM2-201ENST00000235372 CEBPAP49715 358 aaPredicted RBP8.04□□□□□ -1.12
PRDM2-201ENST00000235372 SNAP25P60880 206 aa8.04□□□□□ -1.12
PRDM2-201ENST00000235372 EHHADHQ08426 723 aa8.04□□□□□ -1.12
PRDM2-201ENST00000235372 AP1B1Q10567 949 aa8.04□□□□□ -1.12
PRDM2-201ENST00000235372 SLFN12LQ6IEE8 588 aa8.04□□□□□ -1.12
PRDM2-201ENST00000235372 COA7Q96BR5 231 aa8.04□□□□□ -1.12
PRDM2-201ENST00000235372 SLC10A4Q96EP9 437 aa8.04□□□□□ -1.12
PRDM2-201ENST00000235372 CEP170P1Q96L14 293 aa8.04□□□□□ -1.12
PRDM2-201ENST00000235372 YTHDC2Q9H6S0 1430 aaKnown RBP8.04□□□□□ -1.12
PRDM2-201ENST00000235372 RPAP3Q9H6T3 665 aaPredicted RBP8.04□□□□□ -1.12
PRDM2-201ENST00000235372 UTP6Q9NYH9 597 aaKnown RBP8.04□□□□□ -1.12
PRDM2-201ENST00000235372 HNRNPCP07910 306 aaKnown RBP eCLIP8.04□□□□□ -1.12
PRDM2-201ENST00000235372 PSMA2P25787 234 aa8.04□□□□□ -1.12
PRDM2-201ENST00000235372 OSTNP61366 133 aa8.04□□□□□ -1.12
PRDM2-201ENST00000235372 KRT17Q04695 432 aa8.04□□□□□ -1.12
PRDM2-201ENST00000235372 C10orf76Q5T2E6 689 aa8.04□□□□□ -1.12
PRDM2-201ENST00000235372 MFSD4BQ5TF39 518 aa8.04□□□□□ -1.12
PRDM2-201ENST00000235372 IRAK1BP1Q5VVH5 260 aa8.04□□□□□ -1.12
PRDM2-201ENST00000235372 ADCK2Q7Z695 626 aa8.04□□□□□ -1.12
PRDM2-201ENST00000235372 TRMT44Q8IYL2 757 aaKnown RBP8.04□□□□□ -1.12
PRDM2-201ENST00000235372 CABLES1Q8TDN4 633 aa8.04□□□□□ -1.12
PRDM2-201ENST00000235372 TCP11Q8WWU5 503 aa8.04□□□□□ -1.12
PRDM2-201ENST00000235372 STAMQ92783 540 aa8.04□□□□□ -1.12
PRDM2-201ENST00000235372 TMEM106CQ9BVX2 250 aa8.04□□□□□ -1.12
PRDM2-201ENST00000235372 NIPSNAP3AQ9UFN0 247 aaPredicted RBP8.04□□□□□ -1.12
PRDM2-201ENST00000235372 LRRC74AQ0VAA2 488 aa8.04□□□□□ -1.12
PRDM2-201ENST00000235372 ARHGAP18Q8N392 663 aa8.04□□□□□ -1.12
PRDM2-201ENST00000235372 NCOA5Q9HCD5 579 aaKnown RBP8.04□□□□□ -1.12
PRDM2-201ENST00000235372 TSR3Q9UJK0 312 aaKnown RBP8.04□□□□□ -1.12
PRDM2-201ENST00000235372 PALD1Q9ULE6 856 aa8.04□□□□□ -1.12
PRDM2-201ENST00000235372 CSE1LP55060 971 aaKnown RBP8.04□□□□□ -1.12
PRDM2-201ENST00000235372 ADCK5Q3MIX3 580 aa8.04□□□□□ -1.12
Retrieved 100 of 20,778 RNA–protein pairs in 74.5 ms