RNA–Protein interactions for RNA: ENST00000233242.5

APOB-201, Transcript of apolipoprotein B, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene APOB, Length 14,121 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
APOB-201ENST00000233242 RGS9BPQ6ZS82 235 aa8.8□□□□□ -1
APOB-201ENST00000233242 PGBD1Q96JS3 809 aa8.8□□□□□ -1
APOB-201ENST00000233242 UBE2TQ9NPD8 197 aaPredicted RBP8.8□□□□□ -1
APOB-201ENST00000233242 C16orf96A6NNT2 1141 aa8.79□□□□□ -1
APOB-201ENST00000233242 E4F1Q66K89 784 aaPredicted RBP8.79□□□□□ -1
APOB-201ENST00000233242 UNC5CLQ8IV45 518 aa8.79□□□□□ -1
APOB-201ENST00000233242 WDR91A4D1P6 747 aa8.79□□□□□ -1
APOB-201ENST00000233242 ARL4AP40617 200 aa8.79□□□□□ -1
APOB-201ENST00000233242 CASP2P42575 452 aa8.79□□□□□ -1
APOB-201ENST00000233242 SMYD2Q9NRG4 433 aa8.79□□□□□ -1
APOB-201ENST00000233242 ENO4A6NNW6 628 aa8.79□□□□□ -1
APOB-201ENST00000233242 PSMD14O00487 310 aa8.79□□□□□ -1
APOB-201ENST00000233242 ATP2B4P23634 1241 aa8.79□□□□□ -1
APOB-201ENST00000233242 SURF1Q15526 300 aa8.79□□□□□ -1
APOB-201ENST00000233242 CHRNA2Q15822 529 aa8.79□□□□□ -1
APOB-201ENST00000233242 USH1GQ495M9 461 aa8.79□□□□□ -1
APOB-201ENST00000233242 FAM47EQ6ZV65 393 aa8.79□□□□□ -1
APOB-201ENST00000233242 GRAMD1CQ8IYS0 662 aa8.79□□□□□ -1
APOB-201ENST00000233242 TGFBRAP1Q8WUH2 860 aa8.79□□□□□ -1
APOB-201ENST00000233242 EDC3Q96F86 508 aaKnown RBP8.79□□□□□ -1
APOB-201ENST00000233242 TTC1Q99614 292 aa8.79□□□□□ -1
APOB-201ENST00000233242 FTOQ9C0B1 505 aaKnown RBP eCLIP8.79□□□□□ -1
APOB-201ENST00000233242 FBXL5Q9UKA1 691 aa8.79□□□□□ -1
APOB-201ENST00000233242 PCDHA1Q9Y5I3 950 aa8.79□□□□□ -1
APOB-201ENST00000233242 KRT8P05787 483 aa8.79□□□□□ -1
APOB-201ENST00000233242 IRAK1P51617 712 aa8.79□□□□□ -1
APOB-201ENST00000233242 CCZ1BP86790 482 aa8.79□□□□□ -1
APOB-201ENST00000233242 CCZ1P86791 482 aaPredicted RBP8.79□□□□□ -1
APOB-201ENST00000233242 NYAP1Q6ZVC0 841 aa8.79□□□□□ -1
APOB-201ENST00000233242 PROCA1Q8NCQ7 364 aaPredicted RBP8.79□□□□□ -1
APOB-201ENST00000233242 KIF9Q9HAQ2 790 aa8.79□□□□□ -1
APOB-201ENST00000233242 CYP26B1Q9NR63 512 aa8.79□□□□□ -1
APOB-201ENST00000233242 PITPNM2Q9BZ72 1349 aa8.79□□□□□ -1
APOB-201ENST00000233242 MYCLP12524 364 aaPredicted RBP8.79□□□□□ -1
APOB-201ENST00000233242 BRAFP15056 766 aa8.79□□□□□ -1
APOB-201ENST00000233242 BBS5Q8N3I7 341 aa8.79□□□□□ -1
APOB-201ENST00000233242 TERB1Q8NA31 727 aa8.79□□□□□ -1
APOB-201ENST00000233242 IL17RAQ96F46 866 aa8.79□□□□□ -1
APOB-201ENST00000233242 CHCHD3Q9NX63 227 aaKnown RBP8.79□□□□□ -1
APOB-201ENST00000233242 L3MBTL1Q9Y468 752 aa8.79□□□□□ -1
APOB-201ENST00000233242 MYBL1P10243 752 aa8.79□□□□□ -1
APOB-201ENST00000233242 IFRD2Q12894 506 aaPredicted RBP8.79□□□□□ -1
APOB-201ENST00000233242 TBC1D9BQ66K14 1250 aa8.79□□□□□ -1
APOB-201ENST00000233242 TRPV6Q9H1D0 765 aa8.79□□□□□ -1
APOB-201ENST00000233242 IL10P22301 178 aa8.79□□□□□ -1
APOB-201ENST00000233242 CYFIP2Q96F07 1278 aa8.79□□□□□ -1
APOB-201ENST00000233242 SMYD3Q9H7B4 428 aa8.79□□□□□ -1
APOB-201ENST00000233242 PKD2L2Q9NZM6 624 aa8.79□□□□□ -1
APOB-201ENST00000233242 ERVV-2B6SEH9 535 aa8.79□□□□□ -1
APOB-201ENST00000233242 CDH16O75309 829 aa8.79□□□□□ -1
APOB-201ENST00000233242 CCDC159P0C7I6 412 aa8.79□□□□□ -1
APOB-201ENST00000233242 SAT1P21673 171 aa8.79□□□□□ -1
APOB-201ENST00000233242 SMCR8Q8TEV9 937 aaPredicted RBP8.79□□□□□ -1
APOB-201ENST00000233242 ROPN1BQ9BZX4 212 aaPredicted RBP8.79□□□□□ -1
APOB-201ENST00000233242 ROPN1Q9HAT0 212 aaPredicted RBP8.79□□□□□ -1
APOB-201ENST00000233242 PARVGQ9HBI0 331 aa8.79□□□□□ -1
APOB-201ENST00000233242 SLC40A1Q9NP59 571 aa8.79□□□□□ -1
APOB-201ENST00000233242 ZDHHC9Q9Y397 364 aa8.79□□□□□ -1
APOB-201ENST00000233242 ZNF233A6NK53 670 aa8.79□□□□□ -1
APOB-201ENST00000233242 PRPSAP2O60256 369 aa8.79□□□□□ -1
APOB-201ENST00000233242 ZBED1O96006 694 aa8.79□□□□□ -1
APOB-201ENST00000233242 RAP1GDS1P52306 607 aa8.79□□□□□ -1
APOB-201ENST00000233242 HIC1Q14526 733 aa8.79□□□□□ -1
APOB-201ENST00000233242 NFRKBQ6P4R8 1299 aa8.79□□□□□ -1
APOB-201ENST00000233242 TEX12Q9BXU0 123 aa8.79□□□□□ -1
APOB-201ENST00000233242 ZRANB2O95218 330 aaKnown RBP eCLIP8.79□□□□□ -1
APOB-201ENST00000233242 MRPS15P82914 257 aaKnown RBP8.79□□□□□ -1
APOB-201ENST00000233242 ADCY1Q08828 1119 aa8.79□□□□□ -1
APOB-201ENST00000233242 KRR1Q13601 381 aaKnown RBP8.79□□□□□ -1
APOB-201ENST00000233242 FAM47AQ5JRC9 791 aa8.79□□□□□ -1
APOB-201ENST00000233242 CCNI2Q6ZMN8 369 aaPredicted RBP8.79□□□□□ -1
APOB-201ENST00000233242 KIAA2013Q8IYS2 634 aa8.79□□□□□ -1
APOB-201ENST00000233242 CCDC134Q9H6E4 229 aa8.79□□□□□ -1
APOB-201ENST00000233242 DYNC1LI1Q9Y6G9 523 aaKnown RBP8.79□□□□□ -1
APOB-201ENST00000233242 UBE4BO95155 1302 aa8.79□□□□□ -1
APOB-201ENST00000233242 MAP4P27816 1152 aaKnown RBP8.79□□□□□ -1
APOB-201ENST00000233242 ADPGKQ9BRR6 497 aa8.79□□□□□ -1
APOB-201ENST00000233242 SCG3Q8WXD2 468 aaKnown RBP8.78□□□□□ -1
APOB-201ENST00000233242 SEC16BQ96JE7 1060 aa8.78□□□□□ -1
APOB-201ENST00000233242 UBN2Q6ZU65 1347 aa8.78□□□□□ -1
APOB-201ENST00000233242 TCP11X1B4DZS4 312 aa8.78□□□□□ -1
APOB-201ENST00000233242 KRT75O95678 551 aa8.78□□□□□ -1
APOB-201ENST00000233242 SMARCA1P28370 1054 aa8.78□□□□□ -1
APOB-201ENST00000233242 PSMC1P62191 440 aaKnown RBP8.78□□□□□ -1
APOB-201ENST00000233242 TRIM67Q6ZTA4 783 aa8.78□□□□□ -1
APOB-201ENST00000233242 CYP2E1P05181 493 aaPredicted RBP8.78□□□□□ -1
APOB-201ENST00000233242 MAPKAPK5Q8IW41 473 aa8.78□□□□□ -1
APOB-201ENST00000233242 NACA2Q9H009 215 aa8.78□□□□□ -1
APOB-201ENST00000233242 CALB1P05937 261 aa8.78□□□□□ -1
APOB-201ENST00000233242 IL1RL1Q01638 556 aa8.78□□□□□ -1
APOB-201ENST00000233242 FBXO11Q86XK2 927 aa8.78□□□□□ -1
APOB-201ENST00000233242 STAG2Q8N3U4 1231 aa8.78□□□□□ -1
APOB-201ENST00000233242 CCDC17Q96LX7 622 aa8.78□□□□□ -1
APOB-201ENST00000233242 GCOM2Q9BZD3 368 aaPredicted RBP8.78□□□□□ -1
APOB-201ENST00000233242 KCNF1Q9H3M0 494 aa8.78□□□□□ -1
APOB-201ENST00000233242 CFAP65Q6ZU64 1925 aaKnown RBP8.78□□□□□ -1
APOB-201ENST00000233242 GPC5P78333 572 aa8.78□□□□□ -1
APOB-201ENST00000233242 TTLL11Q8NHH1 800 aa8.78□□□□□ -1
APOB-201ENST00000233242 CFAP36Q96G28 342 aa8.78□□□□□ -1
APOB-201ENST00000233242 TTC17Q96AE7 1141 aa8.78□□□□□ -1
Retrieved 100 of 20,778 RNA–protein pairs in 49.8 ms