RNA–Protein interactions for RNA: ENST00000228872.8

CDKN1B-201, Transcript of cyclin dependent kinase inhibitor 1B, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene CDKN1B, Length 2,657 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CDKN1B-201ENST00000228872 TMED8Q6PL24 325 aaPredicted RBP19.26■□□□□ 0.67
CDKN1B-201ENST00000228872 SP8Q8IXZ3 490 aa19.26■□□□□ 0.67
CDKN1B-201ENST00000228872 LRRC57Q8N9N7 239 aa19.26■□□□□ 0.67
CDKN1B-201ENST00000228872 PPEF1O14829 653 aaPredicted RBP19.25■□□□□ 0.67
CDKN1B-201ENST00000228872 PPFIA2O75334 1257 aa19.25■□□□□ 0.67
CDKN1B-201ENST00000228872 HOOK3Q86VS8 718 aa19.25■□□□□ 0.67
CDKN1B-201ENST00000228872 FAM133AQ8N9E0 248 aa19.25■□□□□ 0.67
CDKN1B-201ENST00000228872 TSG101Q99816 390 aa19.25■□□□□ 0.67
CDKN1B-201ENST00000228872 SELENOSQ9BQE4 189 aa19.25■□□□□ 0.67
CDKN1B-201ENST00000228872 TXLNGYQ9BZA5 131 aa19.25■□□□□ 0.67
CDKN1B-201ENST00000228872 DPH5Q9H2P9 285 aa19.25■□□□□ 0.67
CDKN1B-201ENST00000228872 FAM114A2Q9NRY5 505 aa19.25■□□□□ 0.67
CDKN1B-201ENST00000228872 SPATS2LQ9NUQ6 558 aaKnown RBP19.25■□□□□ 0.67
CDKN1B-201ENST00000228872 SMNDC1O75940 238 aaKnown RBP eCLIP19.25■□□□□ 0.67
CDKN1B-201ENST00000228872 TECP42680 631 aa19.25■□□□□ 0.67
CDKN1B-201ENST00000228872 ASIC2Q16515 512 aa19.25■□□□□ 0.67
CDKN1B-201ENST00000228872 DYMQ7RTS9 669 aa19.25■□□□□ 0.67
CDKN1B-201ENST00000228872 CALML4Q96GE6 196 aa19.25■□□□□ 0.67
CDKN1B-201ENST00000228872 ELAC2Q9BQ52 826 aaKnown RBP19.25■□□□□ 0.67
CDKN1B-201ENST00000228872 ADAM7Q9H2U9 754 aa19.25■□□□□ 0.67
CDKN1B-201ENST00000228872 SAMD15Q9P1V8 674 aa19.25■□□□□ 0.67
CDKN1B-201ENST00000228872 ATP8A1Q9Y2Q0 1164 aa19.25■□□□□ 0.67
CDKN1B-201ENST00000228872 NQO1P15559 274 aaKnown RBP19.24■□□□□ 0.67
CDKN1B-201ENST00000228872 MMP13P45452 471 aa19.24■□□□□ 0.67
CDKN1B-201ENST00000228872 SPDYCQ5MJ68 293 aa19.24■□□□□ 0.67
CDKN1B-201ENST00000228872 CAPRIN2Q6IMN6 1127 aaKnown RBP19.24■□□□□ 0.67
CDKN1B-201ENST00000228872 ZNF804AQ7Z570 1209 aa19.24■□□□□ 0.67
CDKN1B-201ENST00000228872 CCDC26Q8TAB7 109 aa19.24■□□□□ 0.67
CDKN1B-201ENST00000228872 CELF4Q9BZC1 486 aaKnown RBP19.24■□□□□ 0.67
CDKN1B-201ENST00000228872 BLOC1S4Q9NUP1 217 aa19.24■□□□□ 0.67
CDKN1B-201ENST00000228872 ABCF3Q9NUQ8 709 aa19.24■□□□□ 0.67
CDKN1B-201ENST00000228872 AIPL1Q9NZN9 384 aa19.24■□□□□ 0.67
CDKN1B-201ENST00000228872 GGA1Q9UJY5 639 aa19.24■□□□□ 0.67
CDKN1B-201ENST00000228872 COL4A3BPQ9Y5P4 624 aa19.24■□□□□ 0.67
CDKN1B-201ENST00000228872 MYH1P12882 1939 aa19.24■□□□□ 0.67
CDKN1B-201ENST00000228872 DIAPH2O60879 1101 aa19.24■□□□□ 0.67
CDKN1B-201ENST00000228872 ALDH1B1P30837 517 aa19.24■□□□□ 0.67
CDKN1B-201ENST00000228872 KCNJ2P63252 427 aa19.24■□□□□ 0.67
CDKN1B-201ENST00000228872 LRRC41Q15345 812 aa19.24■□□□□ 0.67
CDKN1B-201ENST00000228872 GALNT17Q6IS24 598 aa19.24■□□□□ 0.67
CDKN1B-201ENST00000228872 GLIS3Q8NEA6 775 aa19.24■□□□□ 0.67
CDKN1B-201ENST00000228872 NSUN4Q96CB9 384 aaKnown RBP19.24■□□□□ 0.67
CDKN1B-201ENST00000228872 PEX19P40855 299 aa19.23■□□□□ 0.67
CDKN1B-201ENST00000228872 MECOMQ03112 1051 aa19.23■□□□□ 0.67
CDKN1B-201ENST00000228872 GRB10Q13322 594 aa19.23■□□□□ 0.67
CDKN1B-201ENST00000228872 LETM2Q2VYF4 491 aa19.23■□□□□ 0.67
CDKN1B-201ENST00000228872 MIS18BP1Q6P0N0 1132 aa19.23■□□□□ 0.67
CDKN1B-201ENST00000228872 HEATR3Q7Z4Q2 680 aa19.23■□□□□ 0.67
CDKN1B-201ENST00000228872 RASGEF1CQ8N431 466 aa19.23■□□□□ 0.67
CDKN1B-201ENST00000228872 LAMB1P07942 1786 aa19.23■□□□□ 0.67
CDKN1B-201ENST00000228872 CCNT1O60563 726 aaKnown RBP19.23■□□□□ 0.67
CDKN1B-201ENST00000228872 UFL1O94874 794 aa19.23■□□□□ 0.67
CDKN1B-201ENST00000228872 SHBGP04278 402 aa19.23■□□□□ 0.67
CDKN1B-201ENST00000228872 CDC25CP30307 473 aa19.23■□□□□ 0.67
CDKN1B-201ENST00000228872 ALDH5A1P51649 535 aaPredicted RBP19.23■□□□□ 0.67
CDKN1B-201ENST00000228872 NCALDP61601 193 aa19.23■□□□□ 0.67
CDKN1B-201ENST00000228872 IFI16Q16666 785 aaKnown RBP19.23■□□□□ 0.67
CDKN1B-201ENST00000228872 DHX37Q8IY37 1157 aaKnown RBP19.23■□□□□ 0.67
CDKN1B-201ENST00000228872 RNF217Q8TC41 542 aa19.23■□□□□ 0.67
CDKN1B-201ENST00000228872 ATP8B4Q8TF62 1192 aa19.23■□□□□ 0.67
CDKN1B-201ENST00000228872 SAAL1Q96ER3 474 aa19.23■□□□□ 0.67
CDKN1B-201ENST00000228872 MASTLQ96GX5 879 aa19.23■□□□□ 0.67
CDKN1B-201ENST00000228872 MTFR1LQ9H019 292 aa19.23■□□□□ 0.67
CDKN1B-201ENST00000228872 RIC8AQ9NPQ8 531 aa19.23■□□□□ 0.67
CDKN1B-201ENST00000228872 SLC5A4Q9NY91 659 aa19.23■□□□□ 0.67
CDKN1B-201ENST00000228872 UTP11Q9Y3A2 253 aaKnown RBP19.23■□□□□ 0.67
CDKN1B-201ENST00000228872 STXBP3O00186 592 aa19.22■□□□□ 0.67
CDKN1B-201ENST00000228872 FMO2Q99518 471 aa19.22■□□□□ 0.67
CDKN1B-201ENST00000228872 EPB41L4BQ9H329 900 aa19.22■□□□□ 0.67
CDKN1B-201ENST00000228872 JAG2Q9Y219 1238 aa19.22■□□□□ 0.67
CDKN1B-201ENST00000228872 RARAP10276 462 aa19.22■□□□□ 0.67
CDKN1B-201ENST00000228872 PRDX5P30044 214 aa19.22■□□□□ 0.67
CDKN1B-201ENST00000228872 SLC35G1Q2M3R5 365 aa19.22■□□□□ 0.67
CDKN1B-201ENST00000228872 CNKSR1Q969H4 720 aa19.22■□□□□ 0.67
CDKN1B-201ENST00000228872 SH3GL3Q99963 347 aa19.22■□□□□ 0.67
CDKN1B-201ENST00000228872 UBOX5O94941 541 aa19.21■□□□□ 0.67
CDKN1B-201ENST00000228872 C10orf76Q5T2E6 689 aa19.21■□□□□ 0.67
CDKN1B-201ENST00000228872 FOXR2Q6PJQ5 311 aa19.21■□□□□ 0.67
CDKN1B-201ENST00000228872 TPCN2Q8NHX9 752 aa19.21■□□□□ 0.67
CDKN1B-201ENST00000228872 TBC1D16Q8TBP0 767 aa19.21■□□□□ 0.67
CDKN1B-201ENST00000228872 MICAL1Q8TDZ2 1067 aa19.21■□□□□ 0.67
CDKN1B-201ENST00000228872 PGM2Q96G03 612 aa19.21■□□□□ 0.67
CDKN1B-201ENST00000228872 TRIM51Q9BSJ1 452 aa19.21■□□□□ 0.67
CDKN1B-201ENST00000228872 CCDC134Q9H6E4 229 aa19.21■□□□□ 0.67
CDKN1B-201ENST00000228872 KLHL33A6NCF5 533 aa19.21■□□□□ 0.67
CDKN1B-201ENST00000228872 NUDT17P0C025 328 aa19.21■□□□□ 0.67
CDKN1B-201ENST00000228872 CCND1P24385 295 aa19.21■□□□□ 0.67
CDKN1B-201ENST00000228872 POU5F1Q01860 360 aaKnown RBP19.21■□□□□ 0.67
CDKN1B-201ENST00000228872 ZCWPW2Q504Y3 356 aa19.21■□□□□ 0.67
CDKN1B-201ENST00000228872 PNMA5Q96PV4 448 aa19.21■□□□□ 0.67
CDKN1B-201ENST00000228872 TRIM31Q9BZY9 425 aa19.21■□□□□ 0.67
CDKN1B-201ENST00000228872 GANQ9H2C0 597 aa19.21■□□□□ 0.67
CDKN1B-201ENST00000228872 HOMER3Q9NSC5 361 aa19.21■□□□□ 0.67
CDKN1B-201ENST00000228872 INTS9Q9NV88 658 aaKnown RBP19.21■□□□□ 0.67
CDKN1B-201ENST00000228872 BARHL2Q9NY43 387 aa19.21■□□□□ 0.67
CDKN1B-201ENST00000228872 STK17AQ9UEE5 414 aa19.21■□□□□ 0.67
CDKN1B-201ENST00000228872 CORO1CQ9ULV4 474 aaPredicted RBP19.21■□□□□ 0.67
CDKN1B-201ENST00000228872 TSPY2A6NKD2 308 aa19.2■□□□□ 0.66
CDKN1B-201ENST00000228872 VIMP08670 466 aaKnown RBP19.2■□□□□ 0.66
CDKN1B-201ENST00000228872 FKBP3Q00688 224 aaKnown RBP19.2■□□□□ 0.66
Retrieved 100 of 20,778 RNA–protein pairs in 45.9 ms