RNA–Protein interactions for RNA: ENSMUST00000092971.12

Chd3-201, Transcript of Chromodomain helicase DNA-binding protein 3, mousemouse

APPRIS ALT2 TSL 5 BASIC

Gene Chd3, Length 6,066 nt, Biotype protein coding, Subcellular localisation Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (Experimental data)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
Chd3-201ENSMUST00000092971 Edc4Q3UJB9 1406 aaKnown RBP16.15■□□□□ 0.18
Chd3-201ENSMUST00000092971 FosP01101 380 aa16.14■□□□□ 0.17
Chd3-201ENSMUST00000092971 Rbm46P86049 533 aa16.14■□□□□ 0.17
Chd3-201ENSMUST00000092971 FcgrtQ61559 365 aa16.14■□□□□ 0.17
Chd3-201ENSMUST00000092971 DbnlQ62418 436 aa16.14■□□□□ 0.17
Chd3-201ENSMUST00000092971 Slc6a15Q8BG16 729 aa16.14■□□□□ 0.17
Chd3-201ENSMUST00000092971 Snx14Q8BHY8 964 aa16.14■□□□□ 0.17
Chd3-201ENSMUST00000092971 HadhaQ8BMS1 763 aaKnown RBP16.14■□□□□ 0.17
Chd3-201ENSMUST00000092971 Vmn1r214Q8R279 367 aa16.14■□□□□ 0.17
Chd3-201ENSMUST00000092971 PigbQ9JJQ0 542 aa16.14■□□□□ 0.17
Chd3-201ENSMUST00000092971 Nme3Q9WV85 169 aa16.14■□□□□ 0.17
Chd3-201ENSMUST00000092971 Gm10354K7N6A0 256 aa16.14■□□□□ 0.17
Chd3-201ENSMUST00000092971 Tph1P17532 447 aa16.14■□□□□ 0.17
Chd3-201ENSMUST00000092971 Msr1P30204 458 aaKnown RBP16.14■□□□□ 0.17
Chd3-201ENSMUST00000092971 TwnkQ8CIW5 685 aa16.14■□□□□ 0.17
Chd3-201ENSMUST00000092971 Ifi35Q9D8C4 286 aa16.14■□□□□ 0.17
Chd3-201ENSMUST00000092971 NvlQ9DBY8 855 aaKnown RBP16.14■□□□□ 0.17
Chd3-201ENSMUST00000092971 PycardQ9EPB4 193 aa16.14■□□□□ 0.17
Chd3-201ENSMUST00000092971 Slc8a3S4R2P9 928 aa16.14■□□□□ 0.17
Chd3-201ENSMUST00000092971 Apol11bE9PUZ0 337 aa16.14■□□□□ 0.17
Chd3-201ENSMUST00000092971 Pcdhb9E9Q5G2 828 aa16.14■□□□□ 0.17
Chd3-201ENSMUST00000092971 OatP29758 439 aa16.14■□□□□ 0.17
Chd3-201ENSMUST00000092971 Art3Q8R2G4 371 aa16.14■□□□□ 0.17
Chd3-201ENSMUST00000092971 ChiaQ91XA9 473 aa16.14■□□□□ 0.17
Chd3-201ENSMUST00000092971 Atg3Q9CPX6 314 aa16.14■□□□□ 0.17
Chd3-201ENSMUST00000092971 Ddx25Q9QY15 484 aa16.14■□□□□ 0.17
Chd3-201ENSMUST00000092971 4930444G20RikD3Z741 495 aa16.14■□□□□ 0.17
Chd3-201ENSMUST00000092971 Gm5926E9PWJ8 236 aa16.14■□□□□ 0.17
Chd3-201ENSMUST00000092971 PigsQ6PD26 555 aaKnown RBP16.14■□□□□ 0.17
Chd3-201ENSMUST00000092971 Slc7a14Q8BXR1 771 aa16.14■□□□□ 0.17
Chd3-201ENSMUST00000092971 Zfp113Q8C689 439 aa16.14■□□□□ 0.17
Chd3-201ENSMUST00000092971 Atp5c1Q91VR2 298 aaKnown RBP16.14■□□□□ 0.17
Chd3-201ENSMUST00000092971 Trim54Q9ERP3 366 aa16.14■□□□□ 0.17
Chd3-201ENSMUST00000092971 BC005561E9Q5E2 1589 aa16.14■□□□□ 0.17
Chd3-201ENSMUST00000092971 Cfap65Q3V0B4 1847 aa16.14■□□□□ 0.17
Chd3-201ENSMUST00000092971 Mpp3O88910 568 aa16.14■□□□□ 0.17
Chd3-201ENSMUST00000092971 Mapre1Q61166 268 aaKnown RBP16.14■□□□□ 0.17
Chd3-201ENSMUST00000092971 Cnot8Q9D8X5 292 aa16.14■□□□□ 0.17
Chd3-201ENSMUST00000092971 Bub1bQ9Z1S0 1052 aa16.14■□□□□ 0.17
Chd3-201ENSMUST00000092971 Stk39Q9Z1W9 556 aa16.14■□□□□ 0.17
Chd3-201ENSMUST00000092971 AceP09470 1312 aa16.13■□□□□ 0.17
Chd3-201ENSMUST00000092971 Zfp788E9Q980 884 aa16.13■□□□□ 0.17
Chd3-201ENSMUST00000092971 Slc4a1P04919 929 aa16.13■□□□□ 0.17
Chd3-201ENSMUST00000092971 Git1Q68FF6 770 aa16.13■□□□□ 0.17
Chd3-201ENSMUST00000092971 NptxrQ99J85 493 aa16.13■□□□□ 0.17
Chd3-201ENSMUST00000092971 Cbx8Q9QXV1 362 aa16.13■□□□□ 0.17
Chd3-201ENSMUST00000092971 Ric8aQ3TIR3 530 aa16.13■□□□□ 0.17
Chd3-201ENSMUST00000092971 Fam196bQ6GQV1 535 aa16.13■□□□□ 0.17
Chd3-201ENSMUST00000092971 Bend3Q6PAL0 825 aa16.13■□□□□ 0.17
Chd3-201ENSMUST00000092971 6820408C15RikQ8BJX2 354 aa16.13■□□□□ 0.17
Chd3-201ENSMUST00000092971 Ttc8Q8VD72 515 aa16.13■□□□□ 0.17
Chd3-201ENSMUST00000092971 Hip1Q8VD75 1029 aaKnown RBP16.13■□□□□ 0.17
Chd3-201ENSMUST00000092971 Mrpl50Q8VDT9 159 aaKnown RBP16.13■□□□□ 0.17
Chd3-201ENSMUST00000092971 Ttc33Q9D6K7 262 aa16.13■□□□□ 0.17
Chd3-201ENSMUST00000092971 Trim12cD3Z3L3 497 aa16.13■□□□□ 0.17
Chd3-201ENSMUST00000092971 Dmc1Q61880 340 aa16.13■□□□□ 0.17
Chd3-201ENSMUST00000092971 Ripor2Q80U16 1078 aa16.13■□□□□ 0.17
Chd3-201ENSMUST00000092971 Ddx42Q810A7 929 aaKnown RBP16.13■□□□□ 0.17
Chd3-201ENSMUST00000092971 Orc3Q9JK30 715 aaKnown RBP16.13■□□□□ 0.17
Chd3-201ENSMUST00000092971 Sval3Q76I99 144 aa16.13■□□□□ 0.17
Chd3-201ENSMUST00000092971 FtcdQ91XD4 541 aa16.13■□□□□ 0.17
Chd3-201ENSMUST00000092971 Wars2Q9CYK1 360 aa16.13■□□□□ 0.17
Chd3-201ENSMUST00000092971 Prpf4Q9DAW6 521 aaKnown RBP16.13■□□□□ 0.17
Chd3-201ENSMUST00000092971 Arl4cP61208 192 aa16.12■□□□□ 0.17
Chd3-201ENSMUST00000092971 TdrkhQ80VL1 560 aa16.12■□□□□ 0.17
Chd3-201ENSMUST00000092971 Nup93Q8BJ71 819 aaKnown RBP16.12■□□□□ 0.17
Chd3-201ENSMUST00000092971 Tbk1Q9WUN2 729 aa16.12■□□□□ 0.17
Chd3-201ENSMUST00000092971 Trpc1Q61056 793 aa16.12■□□□□ 0.17
Chd3-201ENSMUST00000092971 Dcaf5Q80T85 946 aa16.12■□□□□ 0.17
Chd3-201ENSMUST00000092971 Gm5622Q810Q0 167 aa16.12■□□□□ 0.17
Chd3-201ENSMUST00000092971 Bpifb6Q8BU51 449 aa16.12■□□□□ 0.17
Chd3-201ENSMUST00000092971 Twf2Q9Z0P5 349 aaKnown RBP16.12■□□□□ 0.17
Chd3-201ENSMUST00000092971 Nfx1B1AY10 1114 aaKnown RBP16.12■□□□□ 0.17
Chd3-201ENSMUST00000092971 Top3aO70157 1003 aa16.12■□□□□ 0.17
Chd3-201ENSMUST00000092971 Stam2O88811 523 aa16.12■□□□□ 0.17
Chd3-201ENSMUST00000092971 LtkP08923 888 aa16.12■□□□□ 0.17
Chd3-201ENSMUST00000092971 PcQ05920 1178 aa16.12■□□□□ 0.17
Chd3-201ENSMUST00000092971 Cul3Q9JLV5 768 aa16.12■□□□□ 0.17
Chd3-201ENSMUST00000092971 Gm15262A0A140LIQ5 728 aa16.12■□□□□ 0.17
Chd3-201ENSMUST00000092971 4932429P05RikA2ADI4 785 aa16.12■□□□□ 0.17
Chd3-201ENSMUST00000092971 Sat1P48026 171 aa16.12■□□□□ 0.17
Chd3-201ENSMUST00000092971 Edem3Q2HXL6 931 aa16.12■□□□□ 0.17
Chd3-201ENSMUST00000092971 Pacsin1Q61644 441 aa16.12■□□□□ 0.17
Chd3-201ENSMUST00000092971 Papd5Q68ED3 633 aaKnown RBP16.12■□□□□ 0.17
Chd3-201ENSMUST00000092971 Asap2Q7SIG6 958 aa16.12■□□□□ 0.17
Chd3-201ENSMUST00000092971 Prl3b1P09586 222 aa16.12■□□□□ 0.17
Chd3-201ENSMUST00000092971 LmnaP48678 665 aaKnown RBP16.12■□□□□ 0.17
Chd3-201ENSMUST00000092971 Cdo1P60334 200 aa16.12■□□□□ 0.17
Chd3-201ENSMUST00000092971 Pcgf5Q3UK78 256 aa16.12■□□□□ 0.17
Chd3-201ENSMUST00000092971 Olfr390Q8VEZ7 311 aa16.12■□□□□ 0.17
Chd3-201ENSMUST00000092971 PudpQ9D5U5 234 aa16.12■□□□□ 0.17
Chd3-201ENSMUST00000092971 Scyl3Q9DBQ7 735 aa16.12■□□□□ 0.17
Chd3-201ENSMUST00000092971 Ubn2Q80WC1 1314 aa16.12■□□□□ 0.17
Chd3-201ENSMUST00000092971 Itpripl1A2ASA8 547 aa16.11■□□□□ 0.17
Chd3-201ENSMUST00000092971 Rgs22G3UYX5 1258 aa16.11■□□□□ 0.17
Chd3-201ENSMUST00000092971 Kcna2P63141 499 aa16.11■□□□□ 0.17
Chd3-201ENSMUST00000092971 Lig4Q8BTF7 911 aa16.11■□□□□ 0.17
Chd3-201ENSMUST00000092971 Gm4340L7N2C4 268 aa16.11■□□□□ 0.17
Chd3-201ENSMUST00000092971 Pm20d1Q8C165 503 aa16.11■□□□□ 0.17
Chd3-201ENSMUST00000092971 Usp44Q8C2S0 711 aa16.11■□□□□ 0.17
Retrieved 100 of 22,080 RNA–protein pairs in 20.4 ms