RNA–Protein interactions for RNA: ENSMUST00000022328.13

Ldb3-202, Transcript of LIM domain-binding protein 3, mousemouse

APPRIS ALT2 TSL 1 (best) BASIC

Gene Ldb3, Length 2,468 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (Experimental data)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
Ldb3-202ENSMUST00000022328 Gpsm2Q8VDU0 679 aa11.99□□□□□ -0.49
Ldb3-202ENSMUST00000022328 Luc7lQ9CYI4 371 aaKnown RBP11.99□□□□□ -0.49
Ldb3-202ENSMUST00000022328 Extl2Q9ES89 330 aa11.99□□□□□ -0.49
Ldb3-202ENSMUST00000022328 Angptl3Q9R182 455 aa11.99□□□□□ -0.49
Ldb3-202ENSMUST00000022328 Atrnl1Q6A051 1378 aa11.99□□□□□ -0.49
Ldb3-202ENSMUST00000022328 Gm28919A0A087WP35 240 aa11.98□□□□□ -0.49
Ldb3-202ENSMUST00000022328 Lrrc38A2VDH3 298 aa11.98□□□□□ -0.49
Ldb3-202ENSMUST00000022328 Eddm13E9Q7F5 164 aa11.98□□□□□ -0.49
Ldb3-202ENSMUST00000022328 Tph1P17532 447 aa11.98□□□□□ -0.49
Ldb3-202ENSMUST00000022328 Rpl13P47963 211 aaKnown RBP11.98□□□□□ -0.49
Ldb3-202ENSMUST00000022328 Trim43aQ3TL54 445 aa11.98□□□□□ -0.49
Ldb3-202ENSMUST00000022328 Eif3j2Q66JS6 263 aa11.98□□□□□ -0.49
Ldb3-202ENSMUST00000022328 Slc9c1Q6UJY2 1175 aa11.98□□□□□ -0.49
Ldb3-202ENSMUST00000022328 Spats2Q8K1N4 545 aaKnown RBP11.98□□□□□ -0.49
Ldb3-202ENSMUST00000022328 Dusp19Q8K4T5 220 aa11.98□□□□□ -0.49
Ldb3-202ENSMUST00000022328 CbsQ91WT9 561 aa11.98□□□□□ -0.49
Ldb3-202ENSMUST00000022328 Asic2Q925H0 512 aa11.98□□□□□ -0.49
Ldb3-202ENSMUST00000022328 Hdac9Q99N13 588 aa11.98□□□□□ -0.49
Ldb3-202ENSMUST00000022328 Arhgef25Q9CWR0 618 aa11.98□□□□□ -0.49
Ldb3-202ENSMUST00000022328 Sertad2Q9JJG5 309 aa11.98□□□□□ -0.49
Ldb3-202ENSMUST00000022328 Trim10Q9WUH5 489 aa11.98□□□□□ -0.49
Ldb3-202ENSMUST00000022328 Serpina1aP07758 413 aa11.98□□□□□ -0.49
Ldb3-202ENSMUST00000022328 Serpina1bP22599 413 aa11.98□□□□□ -0.49
Ldb3-202ENSMUST00000022328 Serpina1cQ00896 412 aa11.98□□□□□ -0.49
Ldb3-202ENSMUST00000022328 Serpina1dQ00897 413 aa11.98□□□□□ -0.49
Ldb3-202ENSMUST00000022328 Dpcr1Q3TNW5 500 aa11.98□□□□□ -0.49
Ldb3-202ENSMUST00000022328 Rnf207Q3V3A7 635 aa11.98□□□□□ -0.49
Ldb3-202ENSMUST00000022328 Ccdc157Q5SPX1 718 aa11.98□□□□□ -0.49
Ldb3-202ENSMUST00000022328 SnphQ80U23 495 aa11.98□□□□□ -0.49
Ldb3-202ENSMUST00000022328 Fam205aA2APU8 1308 aa11.98□□□□□ -0.49
Ldb3-202ENSMUST00000022328 Gm4907B1AXB9 411 aa11.97□□□□□ -0.49
Ldb3-202ENSMUST00000022328 Ace3D0G895 737 aa11.97□□□□□ -0.49
Ldb3-202ENSMUST00000022328 Trim30cD3YVI9 513 aa11.97□□□□□ -0.49
Ldb3-202ENSMUST00000022328 Nfxl1E9Q8I7 918 aaKnown RBP11.97□□□□□ -0.49
Ldb3-202ENSMUST00000022328 Ap1b1O35643 943 aaKnown RBP11.97□□□□□ -0.49
Ldb3-202ENSMUST00000022328 Eif3dO70194 548 aaKnown RBP11.97□□□□□ -0.49
Ldb3-202ENSMUST00000022328 Ddr1Q03146 911 aa11.97□□□□□ -0.49
Ldb3-202ENSMUST00000022328 Scarf1Q5ND28 820 aa11.97□□□□□ -0.49
Ldb3-202ENSMUST00000022328 Sh3gl2Q62420 352 aa11.97□□□□□ -0.49
Ldb3-202ENSMUST00000022328 Hdac10Q6P3E7 666 aa11.97□□□□□ -0.49
Ldb3-202ENSMUST00000022328 Actn1Q7TPR4 892 aaKnown RBP11.97□□□□□ -0.49
Ldb3-202ENSMUST00000022328 Yars2Q8BYL4 472 aaKnown RBP11.97□□□□□ -0.49
Ldb3-202ENSMUST00000022328 Appl2Q8K3G9 662 aa11.97□□□□□ -0.49
Ldb3-202ENSMUST00000022328 Dnajc17Q91WT4 303 aa11.97□□□□□ -0.49
Ldb3-202ENSMUST00000022328 CactinQ9CS00 772 aaKnown RBP11.97□□□□□ -0.49
Ldb3-202ENSMUST00000022328 Ccdc88cQ6VGS5 2009 aa11.97□□□□□ -0.49
Ldb3-202ENSMUST00000022328 Clrn2B2RVW2 232 aa11.97□□□□□ -0.49
Ldb3-202ENSMUST00000022328 MybP06876 636 aa11.97□□□□□ -0.49
Ldb3-202ENSMUST00000022328 Serpinc1P32261 465 aa11.97□□□□□ -0.49
Ldb3-202ENSMUST00000022328 Traf5P70191 558 aa11.97□□□□□ -0.49
Ldb3-202ENSMUST00000022328 YdjcQ14BV6 310 aa11.97□□□□□ -0.49
Ldb3-202ENSMUST00000022328 Prr7Q3V0I2 269 aa11.97□□□□□ -0.49
Ldb3-202ENSMUST00000022328 Lrig2Q52KR2 1054 aa11.97□□□□□ -0.49
Ldb3-202ENSMUST00000022328 A1cfQ5YD48 595 aa11.97□□□□□ -0.49
Ldb3-202ENSMUST00000022328 Epha7Q61772 998 aa11.97□□□□□ -0.49
Ldb3-202ENSMUST00000022328 PnocQ64387 187 aa11.97□□□□□ -0.49
Ldb3-202ENSMUST00000022328 Phf8Q80TJ7 1023 aa11.97□□□□□ -0.49
Ldb3-202ENSMUST00000022328 Nemp2Q8CB65 421 aa11.97□□□□□ -0.49
Ldb3-202ENSMUST00000022328 Kcnv2Q8CFS6 562 aa11.97□□□□□ -0.49
Ldb3-202ENSMUST00000022328 Creb3l3Q91XE9 479 aa11.97□□□□□ -0.49
Ldb3-202ENSMUST00000022328 Spata17Q9D552 379 aa11.97□□□□□ -0.49
Ldb3-202ENSMUST00000022328 Arhgef7Q9ES28 862 aa11.97□□□□□ -0.49
Ldb3-202ENSMUST00000022328 Itgb4A2A863 1818 aa11.97□□□□□ -0.49
Ldb3-202ENSMUST00000022328 Ttc6G3UYY4 1857 aa11.97□□□□□ -0.49
Ldb3-202ENSMUST00000022328 Il27raO70394 623 aa11.96□□□□□ -0.49
Ldb3-202ENSMUST00000022328 Eif3j1Q3UGC7 261 aaKnown RBP11.96□□□□□ -0.49
Ldb3-202ENSMUST00000022328 Gas7Q60780 421 aa11.96□□□□□ -0.49
Ldb3-202ENSMUST00000022328 Usp17leQ7M764 540 aa11.96□□□□□ -0.49
Ldb3-202ENSMUST00000022328 Gprc5cQ8K3J9 440 aa11.96□□□□□ -0.49
Ldb3-202ENSMUST00000022328 Cd248Q91V98 765 aa11.96□□□□□ -0.49
Ldb3-202ENSMUST00000022328 Bzw2Q91VK1 419 aaKnown RBP11.96□□□□□ -0.49
Ldb3-202ENSMUST00000022328 Erlin1Q91X78 346 aa11.96□□□□□ -0.49
Ldb3-202ENSMUST00000022328 Slc25a38Q91XD8 326 aa11.96□□□□□ -0.49
Ldb3-202ENSMUST00000022328 Ubxn1Q922Y1 297 aa11.96□□□□□ -0.49
Ldb3-202ENSMUST00000022328 Six6os1Q9CTN5 574 aa11.96□□□□□ -0.49
Ldb3-202ENSMUST00000022328 GrapQ9CX99 217 aa11.96□□□□□ -0.49
Ldb3-202ENSMUST00000022328 Q9D5Q8 446 aa11.96□□□□□ -0.49
Ldb3-202ENSMUST00000022328 Calr3Q9D9Q6 380 aa11.96□□□□□ -0.49
Ldb3-202ENSMUST00000022328 Lztfl1Q9JHQ5 299 aa11.96□□□□□ -0.49
Ldb3-202ENSMUST00000022328 Actn2Q9JI91 894 aa11.96□□□□□ -0.49
Ldb3-202ENSMUST00000022328 Sh2b2Q9JID9 621 aa11.96□□□□□ -0.49
Ldb3-202ENSMUST00000022328 Txnrd2Q9JLT4 524 aa11.96□□□□□ -0.49
Ldb3-202ENSMUST00000022328 Kank3Q9Z1P7 791 aa11.96□□□□□ -0.49
Ldb3-202ENSMUST00000022328 Adgrf5G5E8Q8 1348 aa11.96□□□□□ -0.49
Ldb3-202ENSMUST00000022328 Brd9Q3UQU0 596 aaKnown RBP11.96□□□□□ -0.5
Ldb3-202ENSMUST00000022328 Serpinb6dQ3UWK8 375 aa11.96□□□□□ -0.5
Ldb3-202ENSMUST00000022328 Krt31Q61765 416 aa11.96□□□□□ -0.5
Ldb3-202ENSMUST00000022328 Six2Q62232 296 aa11.96□□□□□ -0.5
Ldb3-202ENSMUST00000022328 ErfeQ6PGN1 340 aa11.96□□□□□ -0.5
Ldb3-202ENSMUST00000022328 Tmem39bQ810L4 492 aa11.96□□□□□ -0.5
Ldb3-202ENSMUST00000022328 SucoQ8C341 1250 aa11.96□□□□□ -0.5
Ldb3-202ENSMUST00000022328 Slc4a8Q8JZR6 1089 aa11.96□□□□□ -0.5
Ldb3-202ENSMUST00000022328 Peg12Q9WVA7 283 aa11.96□□□□□ -0.5
Ldb3-202ENSMUST00000022328 NynrinQ5DTZ0 1840 aa11.96□□□□□ -0.5
Ldb3-202ENSMUST00000022328 Frmpd3A0A140LIW3 1774 aa11.95□□□□□ -0.5
Ldb3-202ENSMUST00000022328 Fyb2A2A995 729 aa11.95□□□□□ -0.5
Ldb3-202ENSMUST00000022328 Nmt1O70310 496 aaKnown RBP11.95□□□□□ -0.5
Ldb3-202ENSMUST00000022328 Tp53P02340 387 aa11.95□□□□□ -0.5
Ldb3-202ENSMUST00000022328 ArP19091 899 aa11.95□□□□□ -0.5
Ldb3-202ENSMUST00000022328 HmmrQ00547 794 aaKnown RBP11.95□□□□□ -0.5
Retrieved 100 of 22,080 RNA–protein pairs in 23.3 ms