RNA–Protein interactions for RNA: ENSMUST00000005705.7

Trim28-201, Transcript of Transcription intermediary factor 1-beta, mousemouse

APPRIS P1 TSL 1 (best) BASIC

Gene Trim28, Length 3,245 nt, Biotype protein coding, Subcellular localisation Exosome .

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RNA Protein Prediction (catRAPID) Interaction (Experimental data)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
Trim28-201ENSMUST00000005705 4930502E18RikQ14BQ3 236 aa17.64■□□□□ 0.41
Trim28-201ENSMUST00000005705 Asap3Q5U464 904 aa17.64■□□□□ 0.41
Trim28-201ENSMUST00000005705 R3hdm2Q80TM6 1044 aaKnown RBP17.64■□□□□ 0.41
Trim28-201ENSMUST00000005705 Cdk17Q8K0D0 523 aa17.64■□□□□ 0.41
Trim28-201ENSMUST00000005705 Luc7lQ9CYI4 371 aaKnown RBP17.64■□□□□ 0.41
Trim28-201ENSMUST00000005705 Smchd1Q6P5D8 2007 aaKnown RBP17.64■□□□□ 0.41
Trim28-201ENSMUST00000005705 Mms22lB1AUR6 1238 aa17.64■□□□□ 0.41
Trim28-201ENSMUST00000005705 Stat4P42228 749 aa17.64■□□□□ 0.41
Trim28-201ENSMUST00000005705 Tor4aQ8BH02 426 aa17.64■□□□□ 0.41
Trim28-201ENSMUST00000005705 Fbxo28Q8BIG4 368 aa17.64■□□□□ 0.41
Trim28-201ENSMUST00000005705 Chtf18Q8BIW9 969 aa17.64■□□□□ 0.41
Trim28-201ENSMUST00000005705 Pcdha5Q91Y15 934 aa17.64■□□□□ 0.41
Trim28-201ENSMUST00000005705 SncbQ91ZZ3 133 aa17.64■□□□□ 0.41
Trim28-201ENSMUST00000005705 Psma8Q9CWH6 250 aa17.64■□□□□ 0.41
Trim28-201ENSMUST00000005705 Azi2Q9QYP6 405 aa17.64■□□□□ 0.41
Trim28-201ENSMUST00000005705 Stat2Q9WVL2 923 aa17.64■□□□□ 0.41
Trim28-201ENSMUST00000005705 Wdr72D3YYM4 1114 aa17.63■□□□□ 0.41
Trim28-201ENSMUST00000005705 Zc3h7bF8VPP8 982 aaKnown RBP17.63■□□□□ 0.41
Trim28-201ENSMUST00000005705 DtnbO70585 659 aa17.63■□□□□ 0.41
Trim28-201ENSMUST00000005705 Zc3h18Q0P678 948 aaKnown RBP17.63■□□□□ 0.41
Trim28-201ENSMUST00000005705 Gm5935Q497S0 212 aa17.63■□□□□ 0.41
Trim28-201ENSMUST00000005705 Pip5kl1Q6U7H8 395 aa17.63■□□□□ 0.41
Trim28-201ENSMUST00000005705 Pank4Q80YV4 820 aa17.63■□□□□ 0.41
Trim28-201ENSMUST00000005705 Usp38Q8BW70 1042 aa17.63■□□□□ 0.41
Trim28-201ENSMUST00000005705 Spire2Q8K1S6 718 aa17.63■□□□□ 0.41
Trim28-201ENSMUST00000005705 Pop1Q8K205 1045 aa17.63■□□□□ 0.41
Trim28-201ENSMUST00000005705 Oxnad1Q8VE38 311 aa17.63■□□□□ 0.41
Trim28-201ENSMUST00000005705 Chn1Q91V57 459 aa17.63■□□□□ 0.41
Trim28-201ENSMUST00000005705 Pcdhgb4Q91XX6 912 aa17.63■□□□□ 0.41
Trim28-201ENSMUST00000005705 Lzts2Q91YU6 671 aa17.63■□□□□ 0.41
Trim28-201ENSMUST00000005705 CalrP14211 416 aaKnown RBP17.63■□□□□ 0.41
Trim28-201ENSMUST00000005705 Pkn1P70268 946 aa17.63■□□□□ 0.41
Trim28-201ENSMUST00000005705 RelaQ04207 549 aa17.63■□□□□ 0.41
Trim28-201ENSMUST00000005705 Mettl14Q3UIK4 456 aa17.63■□□□□ 0.41
Trim28-201ENSMUST00000005705 KaznQ69ZS8 779 aa17.63■□□□□ 0.41
Trim28-201ENSMUST00000005705 Epc2Q8C0I4 808 aa17.63■□□□□ 0.41
Trim28-201ENSMUST00000005705 Cog5Q8C0L8 829 aa17.63■□□□□ 0.41
Trim28-201ENSMUST00000005705 Iws1Q8C1D8 766 aa17.63■□□□□ 0.41
Trim28-201ENSMUST00000005705 Acat1Q8QZT1 424 aa17.63■□□□□ 0.41
Trim28-201ENSMUST00000005705 Nsun7Q14AW5 724 aa17.62■□□□□ 0.41
Trim28-201ENSMUST00000005705 Krt31Q61765 416 aa17.62■□□□□ 0.41
Trim28-201ENSMUST00000005705 Flvcr1B2RXV4 560 aa17.62■□□□□ 0.41
Trim28-201ENSMUST00000005705 Hnrnph3D3Z3N4 346 aaKnown RBP17.62■□□□□ 0.41
Trim28-201ENSMUST00000005705 Nap1l2P51860 460 aa17.62■□□□□ 0.41
Trim28-201ENSMUST00000005705 Tex11Q14AT2 947 aa17.62■□□□□ 0.41
Trim28-201ENSMUST00000005705 Rasip1Q3U0S6 961 aa17.62■□□□□ 0.41
Trim28-201ENSMUST00000005705 Clul1Q3ZRW6 464 aa17.62■□□□□ 0.41
Trim28-201ENSMUST00000005705 Vps41Q5KU39 853 aa17.62■□□□□ 0.41
Trim28-201ENSMUST00000005705 Lilrb4Q64281 335 aa17.62■□□□□ 0.41
Trim28-201ENSMUST00000005705 Fbxo10Q7TQF2 950 aa17.62■□□□□ 0.41
Trim28-201ENSMUST00000005705 H6pdQ8CFX1 789 aa17.62■□□□□ 0.41
Trim28-201ENSMUST00000005705 Dr1Q91WV0 176 aa17.62■□□□□ 0.41
Trim28-201ENSMUST00000005705 Frmpd4A2AFR3 1320 aa17.62■□□□□ 0.41
Trim28-201ENSMUST00000005705 Fgd3O88842 733 aa17.62■□□□□ 0.41
Trim28-201ENSMUST00000005705 Rbm46P86049 533 aa17.62■□□□□ 0.41
Trim28-201ENSMUST00000005705 Yy1Q00899 414 aa17.62■□□□□ 0.41
Trim28-201ENSMUST00000005705 Tspyl5Q69ZB3 406 aa17.62■□□□□ 0.41
Trim28-201ENSMUST00000005705 Pkn2Q8BWW9 983 aa17.62■□□□□ 0.41
Trim28-201ENSMUST00000005705 Lpin2Q99PI5 893 aa17.62■□□□□ 0.41
Trim28-201ENSMUST00000005705 Slc5a4aQ9ET37 656 aa17.62■□□□□ 0.41
Trim28-201ENSMUST00000005705 NagaQ9QWR8 415 aa17.62■□□□□ 0.41
Trim28-201ENSMUST00000005705 Vmn2r79E9Q067 851 aa17.61■□□□□ 0.41
Trim28-201ENSMUST00000005705 Ppp1r9aH3BJD6 1292 aa17.61■□□□□ 0.41
Trim28-201ENSMUST00000005705 Orc4O88708 433 aa17.61■□□□□ 0.41
Trim28-201ENSMUST00000005705 Aimp1P31230 310 aaKnown RBP17.61■□□□□ 0.41
Trim28-201ENSMUST00000005705 Spata18Q0P557 537 aa17.61■□□□□ 0.41
Trim28-201ENSMUST00000005705 Nhej1Q3KNJ2 295 aa17.61■□□□□ 0.41
Trim28-201ENSMUST00000005705 Kiaa0319Q5SZV5 1081 aa17.61■□□□□ 0.41
Trim28-201ENSMUST00000005705 StilQ60988 1262 aa17.61■□□□□ 0.41
Trim28-201ENSMUST00000005705 Cd37Q61470 281 aa17.61■□□□□ 0.41
Trim28-201ENSMUST00000005705 Slf1Q8R3P9 1054 aa17.61■□□□□ 0.41
Trim28-201ENSMUST00000005705 Calr3Q9D9Q6 380 aa17.61■□□□□ 0.41
Trim28-201ENSMUST00000005705 CsadQ9DBE0 493 aa17.61■□□□□ 0.41
Trim28-201ENSMUST00000005705 Vmn1r209Q5NC97 312 aa17.61■□□□□ 0.41
Trim28-201ENSMUST00000005705 Serpinb6Q60854 378 aa17.61■□□□□ 0.41
Trim28-201ENSMUST00000005705 Ugt1a9Q62452 528 aa17.61■□□□□ 0.41
Trim28-201ENSMUST00000005705 Zmynd10Q99ML0 440 aa17.61■□□□□ 0.41
Trim28-201ENSMUST00000005705 4930519G04RikQ9CPT7 205 aa17.61■□□□□ 0.41
Trim28-201ENSMUST00000005705 Fmnl1Q9JL26 1094 aa17.61■□□□□ 0.41
Trim28-201ENSMUST00000005705 Krt71Q9R0H5 524 aa17.61■□□□□ 0.41
Trim28-201ENSMUST00000005705 Ltbp2O08999 1813 aa17.61■□□□□ 0.41
Trim28-201ENSMUST00000005705 Chd5A2A8L1 1946 aa17.61■□□□□ 0.41
Trim28-201ENSMUST00000005705 Gm1758F6VZZ1 202 aa17.6■□□□□ 0.41
Trim28-201ENSMUST00000005705 Gm5169Q5M8P2 212 aa17.6■□□□□ 0.41
Trim28-201ENSMUST00000005705 TwistnbQ78WZ7 330 aaKnown RBP17.6■□□□□ 0.41
Trim28-201ENSMUST00000005705 Gcfc2Q8BKT3 769 aa17.6■□□□□ 0.41
Trim28-201ENSMUST00000005705 Armc6Q8BNU0 468 aa17.6■□□□□ 0.41
Trim28-201ENSMUST00000005705 CbsQ91WT9 561 aa17.6■□□□□ 0.41
Trim28-201ENSMUST00000005705 Gtf3c6Q9D8P7 227 aa17.6■□□□□ 0.41
Trim28-201ENSMUST00000005705 Mxra8Q9DBV4 442 aa17.6■□□□□ 0.41
Trim28-201ENSMUST00000005705 Mucl2P02815 138 aa17.6■□□□□ 0.41
Trim28-201ENSMUST00000005705 Bend4P86174 541 aa17.6■□□□□ 0.41
Trim28-201ENSMUST00000005705 EgfrQ01279 1210 aa17.6■□□□□ 0.41
Trim28-201ENSMUST00000005705 Phactr4Q501J7 694 aa17.6■□□□□ 0.41
Trim28-201ENSMUST00000005705 ItgaeQ60677 1167 aa17.6■□□□□ 0.41
Trim28-201ENSMUST00000005705 Grik5Q61626 979 aa17.6■□□□□ 0.41
Trim28-201ENSMUST00000005705 Kif5bQ61768 963 aa17.6■□□□□ 0.41
Trim28-201ENSMUST00000005705 Kbtbd4Q8R179 534 aa17.6■□□□□ 0.41
Trim28-201ENSMUST00000005705 Lrrc42Q8R2U7 421 aa17.6■□□□□ 0.41
Trim28-201ENSMUST00000005705 Pstpip2Q99M15 334 aa17.6■□□□□ 0.41
Retrieved 100 of 22,080 RNA–protein pairs in 116.1 ms