RNA–Protein interactions for RNA: ENST00000640807.1

KCNMA1-289, Transcript of potassium calcium-activated channel subfamily M alpha 1, humanhuman

APPRIS ALT2 TSL 1 (best) BASIC

Gene KCNMA1, Length 3,387 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
KCNMA1-289ENST00000640807 SKOR2Q2VWA4 1001 aaPredicted RBP13.25□□□□□ -0.29
KCNMA1-289ENST00000640807 PLPPR4Q7Z2D5 763 aa13.25□□□□□ -0.29
KCNMA1-289ENST00000640807 TUT1Q9H6E5 874 aaKnown RBP13.25□□□□□ -0.29
KCNMA1-289ENST00000640807 HOOK1Q9UJC3 728 aaKnown RBP13.25□□□□□ -0.29
KCNMA1-289ENST00000640807 EMSYQ7Z589 1322 aa13.25□□□□□ -0.29
KCNMA1-289ENST00000640807 LGR5O75473 907 aa13.24□□□□□ -0.29
KCNMA1-289ENST00000640807 IRX5P78411 483 aaPredicted RBP13.24□□□□□ -0.29
KCNMA1-289ENST00000640807 XKR3Q5GH77 459 aa13.24□□□□□ -0.29
KCNMA1-289ENST00000640807 HYIQ5T013 277 aa13.24□□□□□ -0.29
KCNMA1-289ENST00000640807 PNMA5Q96PV4 448 aa13.24□□□□□ -0.29
KCNMA1-289ENST00000640807 UPF3AQ9H1J1 476 aaKnown RBP13.24□□□□□ -0.29
KCNMA1-289ENST00000640807 CUEDC2Q9H467 287 aa13.24□□□□□ -0.29
KCNMA1-289ENST00000640807 SEPT9Q9UHD8 586 aaPredicted RBP13.24□□□□□ -0.29
KCNMA1-289ENST00000640807 MAFBQ9Y5Q3 323 aaPredicted RBP13.24□□□□□ -0.29
KCNMA1-289ENST00000640807 IGKV6D-21A0A0A0MT36 114 aa13.24□□□□□ -0.29
KCNMA1-289ENST00000640807 FAM237AA0A1B0GTK4 181 aa13.24□□□□□ -0.29
KCNMA1-289ENST00000640807 E9PMD0 336 aa13.24□□□□□ -0.29
KCNMA1-289ENST00000640807 YWHABP31946 246 aaKnown RBP13.24□□□□□ -0.29
KCNMA1-289ENST00000640807 XKR9Q5GH70 373 aa13.24□□□□□ -0.29
KCNMA1-289ENST00000640807 SV2BQ7L1I2 683 aa13.24□□□□□ -0.29
KCNMA1-289ENST00000640807 FMR1NBQ8N0W7 255 aaPredicted RBP13.24□□□□□ -0.29
KCNMA1-289ENST00000640807 AFAP1L1Q8TED9 768 aa13.24□□□□□ -0.29
KCNMA1-289ENST00000640807 ARMC5Q96C12 935 aa13.24□□□□□ -0.29
KCNMA1-289ENST00000640807 ZNF333Q96JL9 665 aa13.24□□□□□ -0.29
KCNMA1-289ENST00000640807 TMEM106CQ9BVX2 250 aa13.24□□□□□ -0.29
KCNMA1-289ENST00000640807 MYH9P35579 1960 aaKnown RBP13.24□□□□□ -0.29
KCNMA1-289ENST00000640807 A0A087X0B3 334 aa13.24□□□□□ -0.29
KCNMA1-289ENST00000640807 ARHGEF35A5YM69 484 aa13.24□□□□□ -0.29
KCNMA1-289ENST00000640807 ECM1Q16610 540 aa13.24□□□□□ -0.29
KCNMA1-289ENST00000640807 TMEM119Q4V9L6 283 aa13.24□□□□□ -0.29
KCNMA1-289ENST00000640807 KANK3Q6NY19 840 aa13.24□□□□□ -0.29
KCNMA1-289ENST00000640807 LARP4BQ92615 738 aaKnown RBP13.24□□□□□ -0.29
KCNMA1-289ENST00000640807 PCYT2Q99447 389 aa13.24□□□□□ -0.29
KCNMA1-289ENST00000640807 KATNAL1Q9BW62 490 aa13.24□□□□□ -0.29
KCNMA1-289ENST00000640807 MCOLN1Q9GZU1 580 aa13.24□□□□□ -0.29
KCNMA1-289ENST00000640807 BMP2KQ9NSY1 1161 aaPredicted RBP13.24□□□□□ -0.29
KCNMA1-289ENST00000640807 SERTAD1Q9UHV2 236 aa13.24□□□□□ -0.29
KCNMA1-289ENST00000640807 CENPFP49454 3210 aa13.23□□□□□ -0.29
KCNMA1-289ENST00000640807 KBTBD13C9JR72 458 aa13.23□□□□□ -0.29
KCNMA1-289ENST00000640807 ZNF862O60290 1169 aa13.23□□□□□ -0.29
KCNMA1-289ENST00000640807 ADAMTS4O75173 837 aa13.23□□□□□ -0.29
KCNMA1-289ENST00000640807 LYPLA2O95372 231 aa13.23□□□□□ -0.29
KCNMA1-289ENST00000640807 OATP04181 439 aa13.23□□□□□ -0.29
KCNMA1-289ENST00000640807 SLFN14P0C7P3 912 aa13.23□□□□□ -0.29
KCNMA1-289ENST00000640807 XRCC6P12956 609 aaKnown RBP eCLIP13.23□□□□□ -0.29
KCNMA1-289ENST00000640807 AMPD3Q01432 767 aa13.23□□□□□ -0.29
KCNMA1-289ENST00000640807 LONRF3Q496Y0 759 aa13.23□□□□□ -0.29
KCNMA1-289ENST00000640807 LHX8Q68G74 356 aa13.23□□□□□ -0.29
KCNMA1-289ENST00000640807 BHMT2Q9H2M3 363 aa13.23□□□□□ -0.29
KCNMA1-289ENST00000640807 PAK6Q9NQU5 681 aaPredicted RBP13.23□□□□□ -0.29
KCNMA1-289ENST00000640807 HTTP42858 3142 aa13.23□□□□□ -0.29
KCNMA1-289ENST00000640807 IGSF9BQ9UPX0 1349 aa13.23□□□□□ -0.29
KCNMA1-289ENST00000640807 MYADML2A6NDP7 307 aa13.23□□□□□ -0.29
KCNMA1-289ENST00000640807 TFRCP02786 760 aaKnown RBP13.23□□□□□ -0.29
KCNMA1-289ENST00000640807 PSMC6P62333 389 aa13.23□□□□□ -0.29
KCNMA1-289ENST00000640807 LRRC41Q15345 812 aa13.23□□□□□ -0.29
KCNMA1-289ENST00000640807 KCNA10Q16322 511 aa13.23□□□□□ -0.29
KCNMA1-289ENST00000640807 ENGASEQ8NFI3 743 aa13.23□□□□□ -0.29
KCNMA1-289ENST00000640807 GPT2Q8TD30 523 aa13.23□□□□□ -0.29
KCNMA1-289ENST00000640807 RAD54LQ92698 747 aa13.23□□□□□ -0.29
KCNMA1-289ENST00000640807 SYAP1Q96A49 352 aaPredicted RBP13.23□□□□□ -0.29
KCNMA1-289ENST00000640807 CEP170P1Q96L14 293 aa13.23□□□□□ -0.29
KCNMA1-289ENST00000640807 MTG1Q9BT17 334 aaPredicted RBP13.23□□□□□ -0.29
KCNMA1-289ENST00000640807 EYA4O95677 639 aa13.23□□□□□ -0.29
KCNMA1-289ENST00000640807 KRT18P05783 430 aaKnown RBP13.23□□□□□ -0.29
KCNMA1-289ENST00000640807 PLA2G4BP0C869 781 aa13.23□□□□□ -0.29
KCNMA1-289ENST00000640807 HOXD8P13378 290 aaPredicted RBP13.23□□□□□ -0.29
KCNMA1-289ENST00000640807 MCM6Q14566 821 aa13.23□□□□□ -0.29
KCNMA1-289ENST00000640807 CXCL17Q6UXB2 119 aa13.23□□□□□ -0.29
KCNMA1-289ENST00000640807 ATP8B4Q8TF62 1192 aa13.23□□□□□ -0.29
KCNMA1-289ENST00000640807 BBXQ8WY36 941 aaPredicted RBP13.23□□□□□ -0.29
KCNMA1-289ENST00000640807 LRRC27Q9C0I9 530 aa13.23□□□□□ -0.29
KCNMA1-289ENST00000640807 ANKEF1Q9NU02 776 aa13.23□□□□□ -0.29
KCNMA1-289ENST00000640807 WRAP73Q9P2S5 460 aaPredicted RBP13.23□□□□□ -0.29
KCNMA1-289ENST00000640807 ZBTB39O15060 712 aa13.22□□□□□ -0.29
KCNMA1-289ENST00000640807 HBP1O60381 514 aa13.22□□□□□ -0.29
KCNMA1-289ENST00000640807 ASGR1P07306 291 aa13.22□□□□□ -0.29
KCNMA1-289ENST00000640807 AFMP43652 599 aa13.22□□□□□ -0.29
KCNMA1-289ENST00000640807 SNW1Q13573 536 aaKnown RBP13.22□□□□□ -0.29
KCNMA1-289ENST00000640807 MTERF2Q49AM1 385 aa13.22□□□□□ -0.29
KCNMA1-289ENST00000640807 KRBA2Q6ZNG9 492 aa13.22□□□□□ -0.29
KCNMA1-289ENST00000640807 KCNK18Q7Z418 384 aa13.22□□□□□ -0.29
KCNMA1-289ENST00000640807 C16orf70Q9BSU1 422 aa13.22□□□□□ -0.29
KCNMA1-289ENST00000640807 MAGEF1Q9HAY2 307 aa13.22□□□□□ -0.29
KCNMA1-289ENST00000640807 TRAK2O60296 914 aa13.22□□□□□ -0.29
KCNMA1-289ENST00000640807 CST5P28325 142 aaPredicted RBP13.22□□□□□ -0.29
KCNMA1-289ENST00000640807 PURAQ00577 322 aaKnown RBP13.22□□□□□ -0.29
KCNMA1-289ENST00000640807 KIAA0753Q2KHM9 967 aa13.22□□□□□ -0.29
KCNMA1-289ENST00000640807 STAMQ92783 540 aa13.22□□□□□ -0.29
KCNMA1-289ENST00000640807 GLT1D1Q96MS3 346 aa13.22□□□□□ -0.29
KCNMA1-289ENST00000640807 TIGD1Q96MW7 591 aa13.22□□□□□ -0.29
KCNMA1-289ENST00000640807 GJB1P08034 283 aa13.21□□□□□ -0.29
KCNMA1-289ENST00000640807 PLCB4Q15147 1175 aa13.21□□□□□ -0.29
KCNMA1-289ENST00000640807 E2F4Q16254 413 aa13.21□□□□□ -0.29
KCNMA1-289ENST00000640807 PLA2G4FQ68DD2 849 aa13.21□□□□□ -0.29
KCNMA1-289ENST00000640807 KLHDC9Q8NEP7 349 aa13.21□□□□□ -0.29
KCNMA1-289ENST00000640807 SH2D3AQ9BRG2 576 aa13.21□□□□□ -0.29
KCNMA1-289ENST00000640807 BLOC1S4Q9NUP1 217 aa13.21□□□□□ -0.29
KCNMA1-289ENST00000640807 CTAGE5O15320 804 aa13.21□□□□□ -0.29
KCNMA1-289ENST00000640807 CABYRO75952 493 aa13.21□□□□□ -0.29
Retrieved 100 of 20,778 RNA–protein pairs in 23.5 ms