RNA–Protein interactions for RNA: ENST00000639004.1

FAM49B-230, Transcript of family with sequence similarity 49 member B, humanhuman

TSL 5 BASIC

Gene FAM49B, Length 837 nt, Biotype protein coding, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
FAM49B-230ENST00000639004 CNTD1Q8N815 330 aa8.43□□□□□ -1.06
FAM49B-230ENST00000639004 SMARCC2Q8TAQ2 1214 aa8.43□□□□□ -1.06
FAM49B-230ENST00000639004 FOXRED1Q96CU9 486 aaPredicted RBP8.43□□□□□ -1.06
FAM49B-230ENST00000639004 SYT3Q9BQG1 590 aa8.43□□□□□ -1.06
FAM49B-230ENST00000639004 ASB1Q9Y576 335 aa8.43□□□□□ -1.06
FAM49B-230ENST00000639004 ZNF839A8K0R7 811 aa8.42□□□□□ -1.06
FAM49B-230ENST00000639004 N4BP3O15049 544 aa8.42□□□□□ -1.06
FAM49B-230ENST00000639004 CYP2C8P10632 490 aa8.42□□□□□ -1.06
FAM49B-230ENST00000639004 CD40P25942 277 aa8.42□□□□□ -1.06
FAM49B-230ENST00000639004 MC4RP32245 332 aa8.42□□□□□ -1.06
FAM49B-230ENST00000639004 EXOSC10Q01780 885 aaKnown RBP8.42□□□□□ -1.06
FAM49B-230ENST00000639004 PLEKHG6Q3KR16 790 aa8.42□□□□□ -1.06
FAM49B-230ENST00000639004 VASNQ6EMK4 673 aa8.42□□□□□ -1.06
FAM49B-230ENST00000639004 TMC5Q6UXY8 1006 aa8.42□□□□□ -1.06
FAM49B-230ENST00000639004 HIPK4Q8NE63 616 aa8.42□□□□□ -1.06
FAM49B-230ENST00000639004 RTF1Q92541 710 aaKnown RBP8.42□□□□□ -1.06
FAM49B-230ENST00000639004 ERCC4Q92889 916 aaPredicted RBP8.42□□□□□ -1.06
FAM49B-230ENST00000639004 SLC39A2Q9NP94 309 aa8.42□□□□□ -1.06
FAM49B-230ENST00000639004 ARHGAP28Q9P2N2 729 aa8.42□□□□□ -1.06
FAM49B-230ENST00000639004 LCHNA4D1U4 455 aa8.41□□□□□ -1.06
FAM49B-230ENST00000639004 GOLGA6L22H0YM25 854 aa8.41□□□□□ -1.06
FAM49B-230ENST00000639004 MPIG6BO95866 241 aa8.41□□□□□ -1.06
FAM49B-230ENST00000639004 ENO2P09104 434 aaPredicted RBP8.41□□□□□ -1.06
FAM49B-230ENST00000639004 TMEM253P0C7T8 217 aa8.41□□□□□ -1.06
FAM49B-230ENST00000639004 PFKPQ01813 784 aa8.41□□□□□ -1.06
FAM49B-230ENST00000639004 RASSF3Q86WH2 238 aa8.41□□□□□ -1.06
FAM49B-230ENST00000639004 CILP2Q8IUL8 1156 aa8.41□□□□□ -1.06
FAM49B-230ENST00000639004 ASPSCR1Q9BZE9 553 aa8.41□□□□□ -1.06
FAM49B-230ENST00000639004 PRAMEF22A3QJZ6 481 aa8.4□□□□□ -1.06
FAM49B-230ENST00000639004 K7ESF4 209 aa8.4□□□□□ -1.06
FAM49B-230ENST00000639004 HMGB1P09429 215 aaKnown RBP8.4□□□□□ -1.06
FAM49B-230ENST00000639004 PTGS1P23219 599 aa8.4□□□□□ -1.06
FAM49B-230ENST00000639004 DLG4P78352 724 aa8.4□□□□□ -1.06
FAM49B-230ENST00000639004 ADCY1Q08828 1119 aa8.4□□□□□ -1.06
FAM49B-230ENST00000639004 ITKQ08881 620 aa8.4□□□□□ -1.06
FAM49B-230ENST00000639004 FAPQ12884 760 aa8.4□□□□□ -1.06
FAM49B-230ENST00000639004 PRAMEF18Q5VWM3 479 aa8.4□□□□□ -1.06
FAM49B-230ENST00000639004 NME9Q86XW9 330 aa8.4□□□□□ -1.06
FAM49B-230ENST00000639004 DTX3Q8N9I9 347 aa8.4□□□□□ -1.06
FAM49B-230ENST00000639004 MTMR8Q96EF0 704 aa8.4□□□□□ -1.06
FAM49B-230ENST00000639004 ZDHHC5Q9C0B5 715 aa8.4□□□□□ -1.06
FAM49B-230ENST00000639004 CCDC8Q9H0W5 538 aaPredicted RBP8.4□□□□□ -1.06
FAM49B-230ENST00000639004 UCKL1Q9NWZ5 548 aa8.4□□□□□ -1.06
FAM49B-230ENST00000639004 FAN1Q9Y2M0 1017 aa8.4□□□□□ -1.06
FAM49B-230ENST00000639004 ITGA1P56199 1179 aa8.39□□□□□ -1.07
FAM49B-230ENST00000639004 ERVK-21P61565 698 aa8.39□□□□□ -1.07
FAM49B-230ENST00000639004 FOXO4P98177 505 aa8.39□□□□□ -1.07
FAM49B-230ENST00000639004 MESP2Q0VG99 397 aa8.39□□□□□ -1.07
FAM49B-230ENST00000639004 IGDCC4Q8TDY8 1250 aa8.39□□□□□ -1.07
FAM49B-230ENST00000639004 KCNN1Q92952 543 aa8.39□□□□□ -1.07
FAM49B-230ENST00000639004 AHCYL2Q96HN2 611 aaKnown RBP8.39□□□□□ -1.07
FAM49B-230ENST00000639004 GORASP1Q9BQQ3 440 aa8.39□□□□□ -1.07
FAM49B-230ENST00000639004 AMNQ9BXJ7 453 aa8.39□□□□□ -1.07
FAM49B-230ENST00000639004 IRF2BPLQ9H1B7 796 aa8.39□□□□□ -1.07
FAM49B-230ENST00000639004 PCDH18Q9HCL0 1135 aa8.39□□□□□ -1.07
FAM49B-230ENST00000639004 DLL4Q9NR61 685 aa8.39□□□□□ -1.07
FAM49B-230ENST00000639004 TOPORSQ9NS56 1045 aaPredicted RBP8.39□□□□□ -1.07
FAM49B-230ENST00000639004 TRHDEQ9UKU6 1024 aa8.39□□□□□ -1.07
FAM49B-230ENST00000639004 NOC2LQ9Y3T9 749 aaKnown RBP8.39□□□□□ -1.07
FAM49B-230ENST00000639004 UBA6A0AVT1 1052 aaPredicted RBP8.38□□□□□ -1.07
FAM49B-230ENST00000639004 ETV2O00321 342 aaPredicted RBP8.38□□□□□ -1.07
FAM49B-230ENST00000639004 KDM1AO60341 852 aa8.38□□□□□ -1.07
FAM49B-230ENST00000639004 LIMS1P48059 325 aa8.38□□□□□ -1.07
FAM49B-230ENST00000639004 ADAM9Q13443 819 aa8.38□□□□□ -1.07
FAM49B-230ENST00000639004 SKIDA1Q1XH10 827 aa8.38□□□□□ -1.07
FAM49B-230ENST00000639004 FRMD7Q6ZUT3 714 aa8.38□□□□□ -1.07
FAM49B-230ENST00000639004 STK32CQ86UX6 486 aa8.38□□□□□ -1.07
FAM49B-230ENST00000639004 E2F7Q96AV8 911 aa8.38□□□□□ -1.07
FAM49B-230ENST00000639004 ZNF496Q96IT1 587 aaPredicted RBP8.38□□□□□ -1.07
FAM49B-230ENST00000639004 NOX5Q96PH1 765 aa8.38□□□□□ -1.07
FAM49B-230ENST00000639004 TMEM209Q96SK2 561 aa8.38□□□□□ -1.07
FAM49B-230ENST00000639004 MENTQ9BUN1 341 aa8.38□□□□□ -1.07
FAM49B-230ENST00000639004 SEMA4AQ9H3S1 761 aa8.38□□□□□ -1.07
FAM49B-230ENST00000639004 INCENPQ9NQS7 918 aa8.38□□□□□ -1.07
FAM49B-230ENST00000639004 USP36Q9P275 1121 aaKnown RBP8.38□□□□□ -1.07
FAM49B-230ENST00000639004 MSRAQ9UJ68 235 aa8.38□□□□□ -1.07
FAM49B-230ENST00000639004 NFIBO00712 420 aa8.37□□□□□ -1.07
FAM49B-230ENST00000639004 PRLP01236 227 aa8.37□□□□□ -1.07
FAM49B-230ENST00000639004 ALDH6A1Q02252 535 aaKnown RBP8.37□□□□□ -1.07
FAM49B-230ENST00000639004 SYDE2Q5VT97 1194 aa8.37□□□□□ -1.07
FAM49B-230ENST00000639004 PHYKPLQ8IUZ5 450 aa8.37□□□□□ -1.07
FAM49B-230ENST00000639004 TMEFF1Q8IYR6 380 aa8.37□□□□□ -1.07
FAM49B-230ENST00000639004 C7orf31Q8N865 590 aa8.37□□□□□ -1.07
FAM49B-230ENST00000639004 CEP89Q96ST8 783 aa8.37□□□□□ -1.07
FAM49B-230ENST00000639004 FOXB1Q99853 325 aa8.37□□□□□ -1.07
FAM49B-230ENST00000639004 C11orf84Q9BUA3 381 aaPredicted RBP8.37□□□□□ -1.07
FAM49B-230ENST00000639004 C14orf119Q9NWQ9 140 aa8.37□□□□□ -1.07
FAM49B-230ENST00000639004 GALNT8Q9NY28 637 aa8.37□□□□□ -1.07
FAM49B-230ENST00000639004 GABRDO14764 452 aa8.36□□□□□ -1.07
FAM49B-230ENST00000639004 GLDCP23378 1020 aa8.36□□□□□ -1.07
FAM49B-230ENST00000639004 PDCD1Q15116 288 aa8.36□□□□□ -1.07
FAM49B-230ENST00000639004 TTC38Q5R3I4 469 aa8.36□□□□□ -1.07
FAM49B-230ENST00000639004 LCE3BQ5TA77 95 aa8.36□□□□□ -1.07
FAM49B-230ENST00000639004 LRSAM1Q6UWE0 723 aa8.36□□□□□ -1.07
FAM49B-230ENST00000639004 SYDE1Q6ZW31 735 aaPredicted RBP8.36□□□□□ -1.07
FAM49B-230ENST00000639004 CMIPQ8IY22 773 aa8.36□□□□□ -1.07
FAM49B-230ENST00000639004 CBARPQ8N350 705 aaPredicted RBP8.36□□□□□ -1.07
FAM49B-230ENST00000639004 MAML3Q96JK9 1138 aa8.36□□□□□ -1.07
FAM49B-230ENST00000639004 ZSWIM3Q96MP5 696 aa8.36□□□□□ -1.07
FAM49B-230ENST00000639004 TUBGCP5Q96RT8 1024 aa8.36□□□□□ -1.07
Retrieved 100 of 20,778 RNA–protein pairs in 61 ms