RNA–Protein interactions for RNA: ENST00000620996.4

VTA1-205, Transcript of vesicle trafficking 1, humanhuman

TSL 3 BASIC

Gene VTA1, Length 3,272 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
VTA1-205ENST00000620996 PAXBP1Q9Y5B6 917 aa10.96□□□□□ -0.66
VTA1-205ENST00000620996 TNNT3P45378 269 aaPredicted RBP10.96□□□□□ -0.66
VTA1-205ENST00000620996 FAM178BQ8IXR5 827 aa10.96□□□□□ -0.66
VTA1-205ENST00000620996 CDCA5Q96FF9 252 aa10.96□□□□□ -0.66
VTA1-205ENST00000620996 IKZF4Q9H2S9 585 aa10.96□□□□□ -0.66
VTA1-205ENST00000620996 PARVGQ9HBI0 331 aa10.96□□□□□ -0.66
VTA1-205ENST00000620996 UBIAD1Q9Y5Z9 338 aa10.96□□□□□ -0.66
VTA1-205ENST00000620996 DOCK1Q14185 1865 aa10.95□□□□□ -0.66
VTA1-205ENST00000620996 RPTORQ8N122 1335 aa10.95□□□□□ -0.66
VTA1-205ENST00000620996 KIF2AO00139 706 aaPredicted RBP10.95□□□□□ -0.66
VTA1-205ENST00000620996 IRF6O14896 467 aa10.95□□□□□ -0.66
VTA1-205ENST00000620996 KCNA1Q09470 495 aa10.95□□□□□ -0.66
VTA1-205ENST00000620996 ENOX2Q16206 610 aaKnown RBP10.95□□□□□ -0.66
VTA1-205ENST00000620996 COBLL1Q53SF7 1204 aa10.95□□□□□ -0.66
VTA1-205ENST00000620996 MIIPQ5JXC2 388 aa10.95□□□□□ -0.66
VTA1-205ENST00000620996 TAF3Q5VWG9 929 aa10.95□□□□□ -0.66
VTA1-205ENST00000620996 PADI6Q6TGC4 694 aa10.95□□□□□ -0.66
VTA1-205ENST00000620996 CYP26C1Q6V0L0 522 aa10.95□□□□□ -0.66
VTA1-205ENST00000620996 LRRC55Q6ZSA7 311 aa10.95□□□□□ -0.66
VTA1-205ENST00000620996 CACNA2D4Q7Z3S7 1137 aa10.95□□□□□ -0.66
VTA1-205ENST00000620996 SYCP3Q8IZU3 236 aa10.95□□□□□ -0.66
VTA1-205ENST00000620996 ZNF397Q8NF99 534 aaPredicted RBP10.95□□□□□ -0.66
VTA1-205ENST00000620996 OR8K1Q8NGG5 319 aa10.95□□□□□ -0.66
VTA1-205ENST00000620996 ZNF507Q8TCN5 953 aa10.95□□□□□ -0.66
VTA1-205ENST00000620996 NSUN6Q8TEA1 469 aaKnown RBP10.95□□□□□ -0.66
VTA1-205ENST00000620996 CCDC51Q96ER9 411 aa10.95□□□□□ -0.66
VTA1-205ENST00000620996 NAA15Q9BXJ9 866 aaKnown RBP10.95□□□□□ -0.66
VTA1-205ENST00000620996 ZSWIM4Q9H7M6 989 aa10.95□□□□□ -0.66
VTA1-205ENST00000620996 A1CFQ9NQ94 594 aaKnown RBP10.95□□□□□ -0.66
VTA1-205ENST00000620996 PCDHA2Q9Y5H9 948 aa10.95□□□□□ -0.66
VTA1-205ENST00000620996 UTP18Q9Y5J1 556 aaKnown RBP eCLIP10.95□□□□□ -0.66
VTA1-205ENST00000620996 CALUO43852 315 aaPredicted RBP10.95□□□□□ -0.66
VTA1-205ENST00000620996 P4HBP07237 508 aaKnown RBP10.95□□□□□ -0.66
VTA1-205ENST00000620996 MKRN3Q13064 507 aaKnown RBP10.95□□□□□ -0.66
VTA1-205ENST00000620996 KNOP1Q1ED39 458 aaKnown RBP10.95□□□□□ -0.66
VTA1-205ENST00000620996 ARHGAP29Q52LW3 1261 aa10.95□□□□□ -0.66
VTA1-205ENST00000620996 PDCL2Q8N4E4 241 aa10.95□□□□□ -0.66
VTA1-205ENST00000620996 RBM46Q8TBY0 533 aaKnown RBP10.95□□□□□ -0.66
VTA1-205ENST00000620996 C12orf42Q96LP6 360 aa10.95□□□□□ -0.66
VTA1-205ENST00000620996 CHP1Q99653 195 aa10.95□□□□□ -0.66
VTA1-205ENST00000620996 NOL12Q9UGY1 213 aaKnown RBP eCLIP10.95□□□□□ -0.66
VTA1-205ENST00000620996 PCDHB13Q9Y5F0 798 aa10.95□□□□□ -0.66
VTA1-205ENST00000620996 V9GYY5 206 aaPredicted RBP10.95□□□□□ -0.66
VTA1-205ENST00000620996 POLR2AP24928 1970 aaKnown RBP10.95□□□□□ -0.66
VTA1-205ENST00000620996 A0A1W2PQC6 194 aa10.94□□□□□ -0.66
VTA1-205ENST00000620996 HIP1RO75146 1068 aa10.94□□□□□ -0.66
VTA1-205ENST00000620996 URI1O94763 535 aaPredicted RBP10.94□□□□□ -0.66
VTA1-205ENST00000620996 CHRM1P11229 460 aaPredicted RBP10.94□□□□□ -0.66
VTA1-205ENST00000620996 ERVK-24P63145 666 aa10.94□□□□□ -0.66
VTA1-205ENST00000620996 NOL9Q5SY16 702 aaKnown RBP10.94□□□□□ -0.66
VTA1-205ENST00000620996 PLA2G4FQ68DD2 849 aa10.94□□□□□ -0.66
VTA1-205ENST00000620996 TMTC1Q8IUR5 882 aa10.94□□□□□ -0.66
VTA1-205ENST00000620996 REXO1L1PQ8IX06 675 aa10.94□□□□□ -0.66
VTA1-205ENST00000620996 TBC1D22BQ9NU19 505 aa10.94□□□□□ -0.66
VTA1-205ENST00000620996 A0A0U1RQJ8 604 aa10.94□□□□□ -0.66
VTA1-205ENST00000620996 K7ENM7 598 aa10.94□□□□□ -0.66
VTA1-205ENST00000620996 BACH1O14867 736 aa10.94□□□□□ -0.66
VTA1-205ENST00000620996 GAP43P17677 238 aa10.94□□□□□ -0.66
VTA1-205ENST00000620996 QARSP47897 775 aaKnown RBP10.94□□□□□ -0.66
VTA1-205ENST00000620996 KCNJ6P48051 423 aa10.94□□□□□ -0.66
VTA1-205ENST00000620996 XKR9Q5GH70 373 aa10.94□□□□□ -0.66
VTA1-205ENST00000620996 SEPT14Q6ZU15 432 aa10.94□□□□□ -0.66
VTA1-205ENST00000620996 EEPD1Q7L9B9 569 aa10.94□□□□□ -0.66
VTA1-205ENST00000620996 NEK11Q8NG66 645 aa10.94□□□□□ -0.66
VTA1-205ENST00000620996 ATRIPQ8WXE1 791 aa10.94□□□□□ -0.66
VTA1-205ENST00000620996 NLRC4Q9NPP4 1024 aa10.94□□□□□ -0.66
VTA1-205ENST00000620996 CYP39A1Q9NYL5 469 aa10.94□□□□□ -0.66
VTA1-205ENST00000620996 CYP2J2P51589 502 aa10.94□□□□□ -0.66
VTA1-205ENST00000620996 CNTN2Q02246 1040 aa10.94□□□□□ -0.66
VTA1-205ENST00000620996 UGCGQ16739 394 aa10.94□□□□□ -0.66
VTA1-205ENST00000620996 C1orf186Q6ZWK4 172 aa10.94□□□□□ -0.66
VTA1-205ENST00000620996 REPS2Q8NFH8 660 aa10.94□□□□□ -0.66
VTA1-205ENST00000620996 NUP58Q9BVL2 599 aa10.94□□□□□ -0.66
VTA1-205ENST00000620996 FRMD3A2A2Y4 597 aa10.93□□□□□ -0.66
VTA1-205ENST00000620996 WDR64B1ANS9 1081 aa10.93□□□□□ -0.66
VTA1-205ENST00000620996 DHX15O43143 795 aaKnown RBP10.93□□□□□ -0.66
VTA1-205ENST00000620996 IPO7O95373 1038 aaKnown RBP10.93□□□□□ -0.66
VTA1-205ENST00000620996 BCRP11274 1271 aa10.93□□□□□ -0.66
VTA1-205ENST00000620996 YWHABP31946 246 aaKnown RBP10.93□□□□□ -0.66
VTA1-205ENST00000620996 FAM102BQ5T8I3 360 aa10.93□□□□□ -0.66
VTA1-205ENST00000620996 RRAGAQ7L523 313 aa10.93□□□□□ -0.66
VTA1-205ENST00000620996 LSM14BQ9BX40 385 aaKnown RBP10.93□□□□□ -0.66
VTA1-205ENST00000620996 IRX2Q9BZI1 471 aaPredicted RBP10.93□□□□□ -0.66
VTA1-205ENST00000620996 KCTD10Q9H3F6 313 aa10.93□□□□□ -0.66
VTA1-205ENST00000620996 DEF6Q9H4E7 631 aa10.93□□□□□ -0.66
VTA1-205ENST00000620996 MAP3K20Q9NYL2 800 aaKnown RBP10.93□□□□□ -0.66
VTA1-205ENST00000620996 CAPN11Q9UMQ6 739 aa10.93□□□□□ -0.66
VTA1-205ENST00000620996 LOC102724159A0A0B4J2E5 919 aa10.93□□□□□ -0.66
VTA1-205ENST00000620996 NR3C1P04150 777 aa10.93□□□□□ -0.66
VTA1-205ENST00000620996 CASQ1P31415 396 aa10.93□□□□□ -0.66
VTA1-205ENST00000620996 OAZ1P54368 228 aa10.93□□□□□ -0.66
VTA1-205ENST00000620996 NPEPPSP55786 919 aa10.93□□□□□ -0.66
VTA1-205ENST00000620996 ETF1P62495 437 aaKnown RBP10.93□□□□□ -0.66
VTA1-205ENST00000620996 ARID5AQ03989 594 aa10.93□□□□□ -0.66
VTA1-205ENST00000620996 PWP2Q15269 919 aaKnown RBP10.93□□□□□ -0.66
VTA1-205ENST00000620996 ZCWPW2Q504Y3 356 aa10.93□□□□□ -0.66
VTA1-205ENST00000620996 ANKRD13AQ8IZ07 590 aa10.93□□□□□ -0.66
VTA1-205ENST00000620996 RDH13Q8NBN7 331 aa10.93□□□□□ -0.66
VTA1-205ENST00000620996 GABBR1Q9UBS5 961 aa10.93□□□□□ -0.66
VTA1-205ENST00000620996 ARMCX3Q9UH62 379 aaPredicted RBP10.93□□□□□ -0.66
Retrieved 100 of 20,778 RNA–protein pairs in 58.8 ms