RNA–Protein interactions for RNA: ENST00000619644.4

SMTN-223, Transcript of smoothelin, human

TSL 2 BASIC

Gene SMTN, Length 3,227 nt, Biotype protein coding, Subcellular localisation Cytosol .

RNA		Protein				Prediction (catRAPID)		Interaction (ENCODE eCLIP)
Transcript Symbol	Ensembl Transcript ID	Gene	UniProt Accession	Length	Protein Status	Prediction Score	Prediction z-Score	p-Value	Fold Change
SMTN-223	ENST00000619644	PPAN	Q9NQ55	473 aa	Known RBP	15.81	■□□□□ 0.12
SMTN-223	ENST00000619644	RPL17-C18orf32	A0A0A6YYL6	228 aa	Known RBP	15.81	■□□□□ 0.12
SMTN-223	ENST00000619644	GRID2IP	A4D2P6	1211 aa		15.81	■□□□□ 0.12
SMTN-223	ENST00000619644		E7EVH7	732 aa		15.81	■□□□□ 0.12
SMTN-223	ENST00000619644	GCNT3	O95395	438 aa		15.81	■□□□□ 0.12
SMTN-223	ENST00000619644	CYP11B2	P19099	503 aa		15.81	■□□□□ 0.12
SMTN-223	ENST00000619644	NF2	P35240	595 aa		15.81	■□□□□ 0.12
SMTN-223	ENST00000619644	ZNF76	P36508	570 aa		15.81	■□□□□ 0.12
SMTN-223	ENST00000619644	PLCB4	Q15147	1175 aa		15.81	■□□□□ 0.12
SMTN-223	ENST00000619644	EXOC3L4	Q17RC7	722 aa		15.81	■□□□□ 0.12
SMTN-223	ENST00000619644	COBLL1	Q53SF7	1204 aa		15.81	■□□□□ 0.12
SMTN-223	ENST00000619644	BARGIN	Q6ZT62	677 aa		15.81	■□□□□ 0.12
SMTN-223	ENST00000619644	SFR1	Q86XK3	245 aa		15.81	■□□□□ 0.12
SMTN-223	ENST00000619644	UBLCP1	Q8WVY7	318 aa	Predicted RBP	15.81	■□□□□ 0.12
SMTN-223	ENST00000619644	PIK3R5	Q8WYR1	880 aa		15.81	■□□□□ 0.12
SMTN-223	ENST00000619644	KDM3A	Q9Y4C1	1321 aa		15.8	■□□□□ 0.12
SMTN-223	ENST00000619644	CHMP2A	O43633	222 aa		15.8	■□□□□ 0.12
SMTN-223	ENST00000619644	XRCC5	P13010	732 aa	Known RBP	15.8	■□□□□ 0.12
SMTN-223	ENST00000619644	TRIM59	Q8IWR1	403 aa		15.8	■□□□□ 0.12
SMTN-223	ENST00000619644	TBC1D16	Q8TBP0	767 aa		15.8	■□□□□ 0.12
SMTN-223	ENST00000619644	PLAA	Q9Y263	795 aa		15.8	■□□□□ 0.12
SMTN-223	ENST00000619644	COL22A1	Q8NFW1	1626 aa	Predicted RBP	15.8	■□□□□ 0.12
SMTN-223	ENST00000619644	FAM107A	O95990	144 aa		15.8	■□□□□ 0.12
SMTN-223	ENST00000619644	ABCB4	P21439	1286 aa		15.8	■□□□□ 0.12
SMTN-223	ENST00000619644	CDR1	P51861	262 aa		15.8	■□□□□ 0.12
SMTN-223	ENST00000619644	QRICH1	Q2TAL8	776 aa		15.8	■□□□□ 0.12
SMTN-223	ENST00000619644	ZCWPW2	Q504Y3	356 aa		15.8	■□□□□ 0.12
SMTN-223	ENST00000619644	PPP4R3A	Q6IN85	833 aa		15.8	■□□□□ 0.12
SMTN-223	ENST00000619644	TRMT1L	Q7Z2T5	733 aa	Known RBP	15.8	■□□□□ 0.12
SMTN-223	ENST00000619644	ATP6V1G3	Q96LB4	118 aa		15.8	■□□□□ 0.12
SMTN-223	ENST00000619644	IKZF4	Q9H2S9	585 aa		15.8	■□□□□ 0.12
SMTN-223	ENST00000619644	LAMB2	P55268	1798 aa		15.8	■□□□□ 0.12
SMTN-223	ENST00000619644	RSPH10B2	B2RC85	870 aa		15.79	■□□□□ 0.12
SMTN-223	ENST00000619644	GNA14	O95837	355 aa		15.79	■□□□□ 0.12
SMTN-223	ENST00000619644	RSPH10B	P0C881	870 aa		15.79	■□□□□ 0.12
SMTN-223	ENST00000619644	MYB	P10242	640 aa		15.79	■□□□□ 0.12
SMTN-223	ENST00000619644	ORC2	Q13416	577 aa	Predicted RBP	15.79	■□□□□ 0.12
SMTN-223	ENST00000619644	EMC10	Q5UCC4	262 aa		15.79	■□□□□ 0.12
SMTN-223	ENST00000619644	ALKBH5	Q6P6C2	394 aa	Known RBP	15.79	■□□□□ 0.12
SMTN-223	ENST00000619644	ZNF571	Q7Z3V5	609 aa	Predicted RBP	15.79	■□□□□ 0.12
SMTN-223	ENST00000619644	U2AF1L4	Q8WU68	220 aa	Known RBP	15.79	■□□□□ 0.12
SMTN-223	ENST00000619644	ANO3	Q9BYT9	981 aa		15.79	■□□□□ 0.12
SMTN-223	ENST00000619644	GDF3	Q9NR23	364 aa		15.79	■□□□□ 0.12
SMTN-223	ENST00000619644	ODF2L	Q9ULJ1	636 aa		15.79	■□□□□ 0.12
SMTN-223	ENST00000619644	DNM3	Q9UQ16	869 aa		15.79	■□□□□ 0.12
SMTN-223	ENST00000619644	hCG_1984214	I3L0E3	225 aa		15.79	■□□□□ 0.12
SMTN-223	ENST00000619644	HLA-DOA	P06340	250 aa		15.79	■□□□□ 0.12
SMTN-223	ENST00000619644	HOXA13	P31271	388 aa	Predicted RBP	15.79	■□□□□ 0.12
SMTN-223	ENST00000619644	NT5C2	P49902	561 aa		15.79	■□□□□ 0.12
SMTN-223	ENST00000619644	GLE1	Q53GS7	698 aa	Known RBP	15.79	■□□□□ 0.12
SMTN-223	ENST00000619644	RC3H1	Q5TC82	1133 aa	Known RBP	15.79	■□□□□ 0.12
SMTN-223	ENST00000619644	MEI1	Q5TIA1	1274 aa		15.79	■□□□□ 0.12
SMTN-223	ENST00000619644	PEX26	Q7Z412	305 aa		15.79	■□□□□ 0.12
SMTN-223	ENST00000619644	DAAM2	Q86T65	1068 aa		15.79	■□□□□ 0.12
SMTN-223	ENST00000619644	ZNF713	Q8N859	430 aa	Predicted RBP	15.79	■□□□□ 0.12
SMTN-223	ENST00000619644	RBM17	Q96I25	401 aa	Known RBP	15.79	■□□□□ 0.12
SMTN-223	ENST00000619644	CEP63	Q96MT8	703 aa		15.79	■□□□□ 0.12
SMTN-223	ENST00000619644	DPH5	Q9H2P9	285 aa		15.79	■□□□□ 0.12
SMTN-223	ENST00000619644	BCS1L	Q9Y276	419 aa		15.79	■□□□□ 0.12
SMTN-223	ENST00000619644	ABCB11	O95342	1321 aa		15.79	■□□□□ 0.12
SMTN-223	ENST00000619644	BACH1	O14867	736 aa		15.79	■□□□□ 0.12
SMTN-223	ENST00000619644	SERPINB2	P05120	415 aa		15.79	■□□□□ 0.12
SMTN-223	ENST00000619644	SMARCA1	P28370	1054 aa		15.79	■□□□□ 0.12
SMTN-223	ENST00000619644	C6orf89	Q6UWU4	347 aa		15.79	■□□□□ 0.12
SMTN-223	ENST00000619644	TBC1D22A	Q8WUA7	517 aa		15.79	■□□□□ 0.12
SMTN-223	ENST00000619644	CCDC114	Q96M63	670 aa		15.79	■□□□□ 0.12
SMTN-223	ENST00000619644	KRIT1	O00522	736 aa		15.78	■□□□□ 0.12
SMTN-223	ENST00000619644	GFPT2	O94808	682 aa		15.78	■□□□□ 0.12
SMTN-223	ENST00000619644	UCHL3	P15374	230 aa		15.78	■□□□□ 0.12
SMTN-223	ENST00000619644	CASP4	P49662	377 aa		15.78	■□□□□ 0.12
SMTN-223	ENST00000619644	KCNA1	Q09470	495 aa		15.78	■□□□□ 0.12
SMTN-223	ENST00000619644	ITGB3BP	Q13352	177 aa	Predicted RBP	15.78	■□□□□ 0.12
SMTN-223	ENST00000619644	PLS1	Q14651	629 aa		15.78	■□□□□ 0.12
SMTN-223	ENST00000619644	WLS	Q5T9L3	541 aa		15.78	■□□□□ 0.12
SMTN-223	ENST00000619644	CCDC121	Q6ZUS5	278 aa		15.78	■□□□□ 0.12
SMTN-223	ENST00000619644	CD302	Q8IX05	232 aa		15.78	■□□□□ 0.12
SMTN-223	ENST00000619644	CYFIP2	Q96F07	1278 aa		15.78	■□□□□ 0.12
SMTN-223	ENST00000619644	EDEM3	Q9BZQ6	932 aa		15.78	■□□□□ 0.12
SMTN-223	ENST00000619644	ZC3H12C	Q9C0D7	883 aa	Known RBP	15.78	■□□□□ 0.12
SMTN-223	ENST00000619644	BHMT2	Q9H2M3	363 aa		15.78	■□□□□ 0.12
SMTN-223	ENST00000619644	VEZT	Q9HBM0	779 aa		15.78	■□□□□ 0.12
SMTN-223	ENST00000619644	UTP3	Q9NQZ2	479 aa	Known RBP eCLIP	15.78	■□□□□ 0.12	2e-6	■■■■■ 142.8
SMTN-223	ENST00000619644	TBCA	O75347	108 aa	Known RBP	15.78	■□□□□ 0.12
SMTN-223	ENST00000619644	AFP	P02771	609 aa	Known RBP	15.78	■□□□□ 0.12
SMTN-223	ENST00000619644	NFIA	Q12857	509 aa		15.78	■□□□□ 0.12
SMTN-223	ENST00000619644	CATSPER3	Q86XQ3	398 aa		15.78	■□□□□ 0.12
SMTN-223	ENST00000619644	CEP57	Q86XR8	500 aa		15.78	■□□□□ 0.12
SMTN-223	ENST00000619644	USP38	Q8NB14	1042 aa		15.78	■□□□□ 0.12
SMTN-223	ENST00000619644	RDH13	Q8NBN7	331 aa		15.78	■□□□□ 0.12
SMTN-223	ENST00000619644	PIGO	Q8TEQ8	1089 aa		15.78	■□□□□ 0.12
SMTN-223	ENST00000619644	REEP2	Q9BRK0	252 aa		15.78	■□□□□ 0.12
SMTN-223	ENST00000619644	DHX36	Q9H2U1	1008 aa	Known RBP	15.78	■□□□□ 0.12
SMTN-223	ENST00000619644	ZNF219	Q9P2Y4	722 aa	Predicted RBP	15.78	■□□□□ 0.12
SMTN-223	ENST00000619644	GGA2	Q9UJY4	613 aa		15.78	■□□□□ 0.12
SMTN-223	ENST00000619644	COL16A1	Q07092	1604 aa	Predicted RBP	15.78	■□□□□ 0.12
SMTN-223	ENST00000619644	CTNNA1	P35221	906 aa	Known RBP	15.77	■□□□□ 0.12
SMTN-223	ENST00000619644	CDC37	Q16543	378 aa	Predicted RBP	15.77	■□□□□ 0.12
SMTN-223	ENST00000619644	KSR1	Q8IVT5	923 aa		15.77	■□□□□ 0.12
SMTN-223	ENST00000619644	MIEF2	Q96C03	454 aa		15.77	■□□□□ 0.12
SMTN-223	ENST00000619644	GCNT4	Q9P109	453 aa		15.77	■□□□□ 0.12

Retrieved 100 of 20,778 RNA–protein pairs in 77.4 ms