RNA–Protein interactions for RNA: ENST00000619541.4

SYNRG-225, Transcript of synergin gamma, humanhuman

APPRIS ALT2 TSL 1 (best) BASIC

Gene SYNRG, Length 3,787 nt, Biotype protein coding, Subcellular localisation Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SYNRG-225ENST00000619541 ANKS1AQ92625 1134 aa15.85■□□□□ 0.13
SYNRG-225ENST00000619541 ARHGEF1Q92888 912 aaKnown RBP15.85■□□□□ 0.13
SYNRG-225ENST00000619541 DDX60Q8IY21 1712 aaKnown RBP15.85■□□□□ 0.13
SYNRG-225ENST00000619541 GOLGA6L10A0A0M3HER8 536 aa15.85■□□□□ 0.13
SYNRG-225ENST00000619541 LGR5O75473 907 aa15.85■□□□□ 0.13
SYNRG-225ENST00000619541 KRT13P13646 458 aa15.85■□□□□ 0.13
SYNRG-225ENST00000619541 AMPD3Q01432 767 aa15.85■□□□□ 0.13
SYNRG-225ENST00000619541 SEC23AQ15436 765 aa15.85■□□□□ 0.13
SYNRG-225ENST00000619541 ARL6IP4Q66PJ3 421 aaKnown RBP15.85■□□□□ 0.13
SYNRG-225ENST00000619541 SLC51AQ86UW1 340 aa15.85■□□□□ 0.13
SYNRG-225ENST00000619541 NELFCDQ8IXH7 590 aa15.85■□□□□ 0.13
SYNRG-225ENST00000619541 LRRC15Q8TF66 581 aa15.85■□□□□ 0.13
SYNRG-225ENST00000619541 BAP1Q92560 729 aa15.85■□□□□ 0.13
SYNRG-225ENST00000619541 PPP1R12CQ9BZL4 782 aa15.85■□□□□ 0.13
SYNRG-225ENST00000619541 NARFQ9UHQ1 456 aa15.85■□□□□ 0.13
SYNRG-225ENST00000619541 TAF1P21675 1872 aa15.84■□□□□ 0.13
SYNRG-225ENST00000619541 AFF2P51816 1311 aa15.84■□□□□ 0.13
SYNRG-225ENST00000619541 HIP1RO75146 1068 aa15.84■□□□□ 0.13
SYNRG-225ENST00000619541 SERPING1P05155 500 aa15.84■□□□□ 0.13
SYNRG-225ENST00000619541 ECHS1P30084 290 aa15.84■□□□□ 0.13
SYNRG-225ENST00000619541 TRAPPC10P48553 1259 aa15.84■□□□□ 0.13
SYNRG-225ENST00000619541 SEMA3FQ13275 785 aa15.84■□□□□ 0.13
SYNRG-225ENST00000619541 ASIC2Q16515 512 aa15.84■□□□□ 0.13
SYNRG-225ENST00000619541 CDCA2Q69YH5 1023 aaPredicted RBP15.84■□□□□ 0.13
SYNRG-225ENST00000619541 CRELD2Q6UXH1 353 aaPredicted RBP15.84■□□□□ 0.13
SYNRG-225ENST00000619541 KBTBD4Q9NVX7 518 aa15.84■□□□□ 0.13
SYNRG-225ENST00000619541 SNX24Q9Y343 169 aa15.84■□□□□ 0.13
SYNRG-225ENST00000619541 LRP5O75197 1615 aa15.84■□□□□ 0.13
SYNRG-225ENST00000619541 SPATA31A6Q5VVP1 1343 aa15.84■□□□□ 0.13
SYNRG-225ENST00000619541 CCNT1O60563 726 aaKnown RBP15.84■□□□□ 0.13
SYNRG-225ENST00000619541 FGFR1OPO95684 399 aaKnown RBP15.84■□□□□ 0.13
SYNRG-225ENST00000619541 NBPF20Q3BBV1 942 aa15.84■□□□□ 0.13
SYNRG-225ENST00000619541 KIAA0895Q8NCT3 520 aa15.84■□□□□ 0.13
SYNRG-225ENST00000619541 SETDB2Q96T68 719 aa15.84■□□□□ 0.13
SYNRG-225ENST00000619541 TSG101Q99816 390 aa15.84■□□□□ 0.13
SYNRG-225ENST00000619541 FGFR1OP2Q9NVK5 253 aa15.84■□□□□ 0.13
SYNRG-225ENST00000619541 ZFATQ9P243 1243 aa15.84■□□□□ 0.13
SYNRG-225ENST00000619541 DBR1Q9UK59 544 aaKnown RBP15.84■□□□□ 0.13
SYNRG-225ENST00000619541 PNMA3Q9UL41 463 aa15.84■□□□□ 0.13
SYNRG-225ENST00000619541 CCND1P24385 295 aa15.84■□□□□ 0.13
SYNRG-225ENST00000619541 TXKP42681 527 aa15.84■□□□□ 0.13
SYNRG-225ENST00000619541 POLE2P56282 527 aa15.84■□□□□ 0.13
SYNRG-225ENST00000619541 FUT2Q10981 343 aa15.84■□□□□ 0.13
SYNRG-225ENST00000619541 NUGGCQ68CJ6 796 aa15.84■□□□□ 0.13
SYNRG-225ENST00000619541 METTL13Q8N6R0 699 aa15.84■□□□□ 0.13
SYNRG-225ENST00000619541 GDAP1Q8TB36 358 aa15.84■□□□□ 0.13
SYNRG-225ENST00000619541 G3BP2Q9UN86 482 aaKnown RBP15.84■□□□□ 0.13
SYNRG-225ENST00000619541 COL5A3P25940 1745 aaPredicted RBP15.83■□□□□ 0.13
SYNRG-225ENST00000619541 PECAM1P16284 738 aaPredicted RBP15.83■□□□□ 0.13
SYNRG-225ENST00000619541 GNAT2P19087 354 aa15.83■□□□□ 0.13
SYNRG-225ENST00000619541 HNRNPH3P31942 346 aaKnown RBP15.83■□□□□ 0.13
SYNRG-225ENST00000619541 TROAPQ12815 778 aa15.83■□□□□ 0.13
SYNRG-225ENST00000619541 SF3B3Q15393 1217 aaKnown RBP15.83■□□□□ 0.13
SYNRG-225ENST00000619541 NBPF5PQ86XG9 351 aaPredicted RBP15.83■□□□□ 0.13
SYNRG-225ENST00000619541 LRRD1A4D1F6 860 aa15.83■□□□□ 0.12
SYNRG-225ENST00000619541 SESN3P58005 492 aa15.83■□□□□ 0.12
SYNRG-225ENST00000619541 ZSCAN29Q8IWY8 852 aaPredicted RBP15.83■□□□□ 0.12
SYNRG-225ENST00000619541 C1orf131Q8NDD1 294 aaKnown RBP15.83■□□□□ 0.12
SYNRG-225ENST00000619541 CALML4Q96GE6 196 aa15.83■□□□□ 0.12
SYNRG-225ENST00000619541 L3MBTL3Q96JM7 780 aaPredicted RBP15.83■□□□□ 0.12
SYNRG-225ENST00000619541 ZMYND12Q9H0C1 365 aa15.83■□□□□ 0.12
SYNRG-225ENST00000619541 PAPOLBQ9NRJ5 636 aaKnown RBP15.83■□□□□ 0.12
SYNRG-225ENST00000619541 MINPP1Q9UNW1 487 aa15.83■□□□□ 0.12
SYNRG-225ENST00000619541 RTCBQ9Y3I0 505 aaKnown RBP15.83■□□□□ 0.12
SYNRG-225ENST00000619541 MYH6P13533 1939 aa15.83■□□□□ 0.12
SYNRG-225ENST00000619541 MAGEB6P1A0A0J9YX57 407 aa15.83■□□□□ 0.12
SYNRG-225ENST00000619541 CALML3P27482 149 aa15.83■□□□□ 0.12
SYNRG-225ENST00000619541 NCALDP61601 193 aa15.83■□□□□ 0.12
SYNRG-225ENST00000619541 PPP2R5BQ15173 497 aa15.83■□□□□ 0.12
SYNRG-225ENST00000619541 HGSNATQ68CP4 663 aa15.83■□□□□ 0.12
SYNRG-225ENST00000619541 GLIS3Q8NEA6 775 aa15.83■□□□□ 0.12
SYNRG-225ENST00000619541 IFT74Q96LB3 600 aa15.83■□□□□ 0.12
SYNRG-225ENST00000619541 ATP6V0A2Q9Y487 856 aa15.83■□□□□ 0.12
SYNRG-225ENST00000619541 TSPY2A6NKD2 308 aa15.82■□□□□ 0.12
SYNRG-225ENST00000619541 TLR2O60603 784 aa15.82■□□□□ 0.12
SYNRG-225ENST00000619541 FGGP02679 453 aa15.82■□□□□ 0.12
SYNRG-225ENST00000619541 KLRK1P26718 216 aa15.82■□□□□ 0.12
SYNRG-225ENST00000619541 DYNLL1P63167 89 aaKnown RBP15.82■□□□□ 0.12
SYNRG-225ENST00000619541 RC3H1Q5TC82 1133 aaKnown RBP15.82■□□□□ 0.12
SYNRG-225ENST00000619541 SV2BQ7L1I2 683 aa15.82■□□□□ 0.12
SYNRG-225ENST00000619541 SLC5A4Q9NY91 659 aa15.82■□□□□ 0.12
SYNRG-225ENST00000619541 CORO1CQ9ULV4 474 aaPredicted RBP15.82■□□□□ 0.12
SYNRG-225ENST00000619541 SLC12A4Q9UP95 1085 aa15.82■□□□□ 0.12
SYNRG-225ENST00000619541 SSU72P8A0A1W2PR75 194 aa15.82■□□□□ 0.12
SYNRG-225ENST00000619541 TCP11X1B4DZS4 312 aa15.82■□□□□ 0.12
SYNRG-225ENST00000619541 CALM1P0DP23 149 aa15.82■□□□□ 0.12
SYNRG-225ENST00000619541 CALM2P0DP24 149 aa15.82■□□□□ 0.12
SYNRG-225ENST00000619541 CALM3P0DP25 149 aa15.82■□□□□ 0.12
SYNRG-225ENST00000619541 ATP4AP20648 1035 aa15.82■□□□□ 0.12
SYNRG-225ENST00000619541 MSH2P43246 934 aa15.82■□□□□ 0.12
SYNRG-225ENST00000619541 MKRN4PQ13434 485 aaPredicted RBP15.82■□□□□ 0.12
SYNRG-225ENST00000619541 SLC18A3Q16572 532 aa15.82■□□□□ 0.12
SYNRG-225ENST00000619541 LONP2Q86WA8 852 aa15.82■□□□□ 0.12
SYNRG-225ENST00000619541 SEPT12Q8IYM1 358 aa15.82■□□□□ 0.12
SYNRG-225ENST00000619541 FBF1Q8TES7 1133 aa15.82■□□□□ 0.12
SYNRG-225ENST00000619541 GLG1Q92896 1179 aa15.82■□□□□ 0.12
SYNRG-225ENST00000619541 NAF1Q96HR8 494 aaKnown RBP15.82■□□□□ 0.12
SYNRG-225ENST00000619541 PAIP2Q9BPZ3 127 aaKnown RBP15.82■□□□□ 0.12
SYNRG-225ENST00000619541 BUD13Q9BRD0 619 aaKnown RBP eCLIP15.82■□□□□ 0.121e-7■■■■■ 27.9
SYNRG-225ENST00000619541 CNTNAP5Q8WYK1 1306 aa15.82■□□□□ 0.12
Retrieved 100 of 20,778 RNA–protein pairs in 77.3 ms