RNA–Protein interactions for RNA: ENST00000616247.4

LMO3-235, Transcript of LIM domain only 3, humanhuman

TSL 5 BASIC

Gene LMO3, Length 3,227 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
LMO3-235ENST00000616247 SAP30BPQ9UHR5 308 aaKnown RBP7.25□□□□□ -1.25
LMO3-235ENST00000616247 GGA2Q9UJY4 613 aa7.25□□□□□ -1.25
LMO3-235ENST00000616247 NR2E1Q9Y466 385 aa7.25□□□□□ -1.25
LMO3-235ENST00000616247 RGPD8O14715 1765 aaPredicted RBP7.25□□□□□ -1.25
LMO3-235ENST00000616247 GSTTP1A0A1W2PQM5 241 aa7.25□□□□□ -1.25
LMO3-235ENST00000616247 LRRD1A4D1F6 860 aa7.25□□□□□ -1.25
LMO3-235ENST00000616247 RASGRF2O14827 1237 aa7.25□□□□□ -1.25
LMO3-235ENST00000616247 PJA2O43164 708 aa7.25□□□□□ -1.25
LMO3-235ENST00000616247 GFPT2O94808 682 aa7.25□□□□□ -1.25
LMO3-235ENST00000616247 ATP2A2P16615 1042 aaKnown RBP7.25□□□□□ -1.25
LMO3-235ENST00000616247 PPP1R2P41236 205 aa7.25□□□□□ -1.25
LMO3-235ENST00000616247 CTCFP49711 727 aaPredicted RBP7.25□□□□□ -1.25
LMO3-235ENST00000616247 USP11P51784 963 aa7.25□□□□□ -1.25
LMO3-235ENST00000616247 RNASELQ05823 741 aaKnown RBP7.25□□□□□ -1.25
LMO3-235ENST00000616247 PSMD2Q13200 908 aa7.25□□□□□ -1.25
LMO3-235ENST00000616247 CAVIN4Q5BKX8 364 aa7.25□□□□□ -1.25
LMO3-235ENST00000616247 ERMARDQ5T6L9 678 aa7.25□□□□□ -1.25
LMO3-235ENST00000616247 HGSNATQ68CP4 663 aa7.25□□□□□ -1.25
LMO3-235ENST00000616247 CENPPQ6IPU0 288 aa7.25□□□□□ -1.25
LMO3-235ENST00000616247 TLDC1Q6P9B6 456 aa7.25□□□□□ -1.25
LMO3-235ENST00000616247 TMED8Q6PL24 325 aaPredicted RBP7.25□□□□□ -1.25
LMO3-235ENST00000616247 INTS8Q75QN2 995 aaKnown RBP7.25□□□□□ -1.25
LMO3-235ENST00000616247 C4orf32Q8N8J7 132 aa7.25□□□□□ -1.25
LMO3-235ENST00000616247 FBXO25Q8TCJ0 367 aa7.25□□□□□ -1.25
LMO3-235ENST00000616247 IQCDQ96DY2 449 aa7.25□□□□□ -1.25
LMO3-235ENST00000616247 ZNF570Q96NI8 536 aa7.25□□□□□ -1.25
LMO3-235ENST00000616247 PAGR1Q9BTK6 254 aa7.25□□□□□ -1.25
LMO3-235ENST00000616247 CRNKL1Q9BZJ0 848 aaKnown RBP7.25□□□□□ -1.25
LMO3-235ENST00000616247 MROH5Q6ZUA9 1318 aa7.24□□□□□ -1.25
LMO3-235ENST00000616247 NPHP3-ACAD11A0A0J9YXS1 232 aa7.24□□□□□ -1.25
LMO3-235ENST00000616247 KLRF2D3W0D1 207 aa7.24□□□□□ -1.25
LMO3-235ENST00000616247 RTN2O75298 545 aa7.24□□□□□ -1.25
LMO3-235ENST00000616247 FLOT1O75955 427 aa7.24□□□□□ -1.25
LMO3-235ENST00000616247 MYL1P05976 194 aa7.24□□□□□ -1.25
LMO3-235ENST00000616247 NEFHP12036 1026 aa7.24□□□□□ -1.25
LMO3-235ENST00000616247 STX2P32856 288 aa7.24□□□□□ -1.25
LMO3-235ENST00000616247 RAD23BP54727 409 aa7.24□□□□□ -1.25
LMO3-235ENST00000616247 LONRF1Q17RB8 773 aa7.24□□□□□ -1.25
LMO3-235ENST00000616247 ANKRD20A2Q5SQ80 823 aa7.24□□□□□ -1.25
LMO3-235ENST00000616247 ANKRD20A1Q5TYW2 823 aa7.24□□□□□ -1.25
LMO3-235ENST00000616247 ANKRD20A3Q5VUR7 823 aa7.24□□□□□ -1.25
LMO3-235ENST00000616247 GJB7Q6PEY0 223 aa7.24□□□□□ -1.25
LMO3-235ENST00000616247 ZNF572Q7Z3I7 529 aaPredicted RBP7.24□□□□□ -1.25
LMO3-235ENST00000616247 NEK8Q86SG6 692 aa7.24□□□□□ -1.25
LMO3-235ENST00000616247 ZSCAN29Q8IWY8 852 aaPredicted RBP7.24□□□□□ -1.25
LMO3-235ENST00000616247 LMNTD2Q8IXW0 634 aa7.24□□□□□ -1.25
LMO3-235ENST00000616247 CCDC105Q8IYK2 499 aa7.24□□□□□ -1.25
LMO3-235ENST00000616247 SLC44A5Q8NCS7 719 aa7.24□□□□□ -1.25
LMO3-235ENST00000616247 CTNNBL1Q8WYA6 563 aaPredicted RBP7.24□□□□□ -1.25
LMO3-235ENST00000616247 P3H4Q92791 437 aa7.24□□□□□ -1.25
LMO3-235ENST00000616247 ADAM33Q9BZ11 813 aa7.24□□□□□ -1.25
LMO3-235ENST00000616247 SEMA4AQ9H3S1 761 aa7.24□□□□□ -1.25
LMO3-235ENST00000616247 C6orf50Q9HD87 102 aa7.24□□□□□ -1.25
LMO3-235ENST00000616247 MTRF1LQ9UGC7 380 aaKnown RBP7.24□□□□□ -1.25
LMO3-235ENST00000616247 G3BP2Q9UN86 482 aaKnown RBP7.24□□□□□ -1.25
LMO3-235ENST00000616247 PCDHB13Q9Y5F0 798 aa7.24□□□□□ -1.25
LMO3-235ENST00000616247 CFAP73A6NFT4 308 aa7.24□□□□□ -1.25
LMO3-235ENST00000616247 H0YGN5 161 aa7.24□□□□□ -1.25
LMO3-235ENST00000616247 KIF3CO14782 793 aa7.24□□□□□ -1.25
LMO3-235ENST00000616247 CETN3O15182 167 aa7.24□□□□□ -1.25
LMO3-235ENST00000616247 CLSTN1O94985 981 aa7.24□□□□□ -1.25
LMO3-235ENST00000616247 GNAT1P11488 350 aa7.24□□□□□ -1.25
LMO3-235ENST00000616247 HNRNPH3P31942 346 aaKnown RBP7.24□□□□□ -1.25
LMO3-235ENST00000616247 PDE6CP51160 858 aa7.24□□□□□ -1.25
LMO3-235ENST00000616247 CHRNDQ07001 517 aa7.24□□□□□ -1.25
LMO3-235ENST00000616247 KCNH2Q12809 1159 aa7.24□□□□□ -1.25
LMO3-235ENST00000616247 ARHGAP44Q17R89 818 aa7.24□□□□□ -1.25
LMO3-235ENST00000616247 LACTB2Q53H82 288 aaPredicted RBP7.24□□□□□ -1.25
LMO3-235ENST00000616247 SLC30A9Q6PML9 568 aa7.24□□□□□ -1.25
LMO3-235ENST00000616247 USP17L2Q6R6M4 530 aa7.24□□□□□ -1.25
LMO3-235ENST00000616247 UNC13DQ70J99 1090 aa7.24□□□□□ -1.25
LMO3-235ENST00000616247 C7orf25Q9BPX7 421 aa7.24□□□□□ -1.25
LMO3-235ENST00000616247 RAB34Q9BZG1 259 aa7.24□□□□□ -1.25
LMO3-235ENST00000616247 TRIM7Q9C029 511 aa7.24□□□□□ -1.25
LMO3-235ENST00000616247 NUCKS1Q9H1E3 243 aaKnown RBP7.24□□□□□ -1.25
LMO3-235ENST00000616247 ARHGEF10LQ9HCE6 1279 aa7.24□□□□□ -1.25
LMO3-235ENST00000616247 OSGEPQ9NPF4 335 aa7.24□□□□□ -1.25
LMO3-235ENST00000616247 BCS1LQ9Y276 419 aa7.24□□□□□ -1.25
LMO3-235ENST00000616247 ZBTB1Q9Y2K1 713 aa7.24□□□□□ -1.25
LMO3-235ENST00000616247 NFS1Q9Y697 457 aa7.24□□□□□ -1.25
LMO3-235ENST00000616247 A0A1W2PRG0 241 aa7.23□□□□□ -1.25
LMO3-235ENST00000616247 CCDC188H7C350 402 aa7.23□□□□□ -1.25
LMO3-235ENST00000616247 GHRP10912 638 aa7.23□□□□□ -1.25
LMO3-235ENST00000616247 PLCG2P16885 1265 aa7.23□□□□□ -1.25
LMO3-235ENST00000616247 NR2F2P24468 414 aa7.23□□□□□ -1.25
LMO3-235ENST00000616247 MSH2P43246 934 aa7.23□□□□□ -1.25
LMO3-235ENST00000616247 RCAN1P53805 252 aa7.23□□□□□ -1.25
LMO3-235ENST00000616247 EIF6P56537 245 aaKnown RBP7.23□□□□□ -1.25
LMO3-235ENST00000616247 TNIP1Q15025 636 aa7.23□□□□□ -1.25
LMO3-235ENST00000616247 AADACL2Q6P093 401 aa7.23□□□□□ -1.25
LMO3-235ENST00000616247 SEPT14Q6ZU15 432 aa7.23□□□□□ -1.25
LMO3-235ENST00000616247 ZNF571Q7Z3V5 609 aaPredicted RBP7.23□□□□□ -1.25
LMO3-235ENST00000616247 DZIP1Q86YF9 867 aaKnown RBP7.23□□□□□ -1.25
LMO3-235ENST00000616247 GUF1Q8N442 669 aaKnown RBP7.23□□□□□ -1.25
LMO3-235ENST00000616247 VGLL2Q8N8G2 317 aa7.23□□□□□ -1.25
LMO3-235ENST00000616247 CCHCR1Q8TD31 782 aa7.23□□□□□ -1.25
LMO3-235ENST00000616247 NUDT12Q9BQG2 462 aa7.23□□□□□ -1.25
LMO3-235ENST00000616247 HOMER3Q9NSC5 361 aa7.23□□□□□ -1.25
LMO3-235ENST00000616247 KLHL14Q9P2G3 628 aa7.23□□□□□ -1.25
LMO3-235ENST00000616247 RASAL2Q9UJF2 1139 aa7.23□□□□□ -1.25
Retrieved 100 of 20,778 RNA–protein pairs in 34 ms