RNA–Protein interactions for RNA: ENST00000613524.4

SYCP1-209, Transcript of synaptonemal complex protein 1, humanhuman

TSL 1 (best) BASIC

Gene SYCP1, Length 3,034 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SYCP1-209ENST00000613524 AFG1LQ8WV93 481 aa5.63□□□□□ -1.51
SYCP1-209ENST00000613524 CLEC4DQ8WXI8 215 aa5.63□□□□□ -1.51
SYCP1-209ENST00000613524 SHISA4Q96DD7 197 aa5.63□□□□□ -1.51
SYCP1-209ENST00000613524 AP5M1Q9H0R1 490 aa5.63□□□□□ -1.51
SYCP1-209ENST00000613524 RANBP17Q9H2T7 1088 aaKnown RBP5.63□□□□□ -1.51
SYCP1-209ENST00000613524 MLXIPQ9HAP2 919 aa5.63□□□□□ -1.51
SYCP1-209ENST00000613524 ETNK1Q9HBU6 452 aa5.63□□□□□ -1.51
SYCP1-209ENST00000613524 FOXD3Q9UJU5 478 aaPredicted RBP5.63□□□□□ -1.51
SYCP1-209ENST00000613524 SLC45A1Q9Y2W3 748 aa5.63□□□□□ -1.51
SYCP1-209ENST00000613524 MRPL11Q9Y3B7 192 aaKnown RBP5.63□□□□□ -1.51
SYCP1-209ENST00000613524 ZNFX1Q9P2E3 1918 aaKnown RBP5.63□□□□□ -1.51
SYCP1-209ENST00000613524 TTC28Q96AY4 2481 aa5.63□□□□□ -1.51
SYCP1-209ENST00000613524 LAMB1P07942 1786 aa5.63□□□□□ -1.51
SYCP1-209ENST00000613524 NOP56O00567 594 aaKnown RBP5.63□□□□□ -1.51
SYCP1-209ENST00000613524 STRNO43815 780 aa5.63□□□□□ -1.51
SYCP1-209ENST00000613524 GJB1P08034 283 aa5.63□□□□□ -1.51
SYCP1-209ENST00000613524 NR3C2P08235 984 aa5.63□□□□□ -1.51
SYCP1-209ENST00000613524 CYP2C9P11712 490 aa5.63□□□□□ -1.51
SYCP1-209ENST00000613524 SMPD1P17405 629 aa5.63□□□□□ -1.51
SYCP1-209ENST00000613524 ATF4P18848 351 aaPredicted RBP5.63□□□□□ -1.51
SYCP1-209ENST00000613524 SSRP1Q08945 709 aaKnown RBP5.63□□□□□ -1.51
SYCP1-209ENST00000613524 TMEM62Q0P6H9 643 aa5.63□□□□□ -1.51
SYCP1-209ENST00000613524 SEPT6Q14141 434 aa5.63□□□□□ -1.51
SYCP1-209ENST00000613524 PPP2R5BQ15173 497 aa5.63□□□□□ -1.51
SYCP1-209ENST00000613524 SH3RF1Q7Z6J0 888 aa5.63□□□□□ -1.51
SYCP1-209ENST00000613524 DEFB128Q7Z7B8 93 aa5.63□□□□□ -1.51
SYCP1-209ENST00000613524 CELF2-AS1Q8N7Q2 184 aa5.63□□□□□ -1.51
SYCP1-209ENST00000613524 SLC39A7Q92504 469 aa5.63□□□□□ -1.51
SYCP1-209ENST00000613524 EDEM1Q92611 657 aa5.63□□□□□ -1.51
SYCP1-209ENST00000613524 POLD4Q9HCU8 107 aa5.63□□□□□ -1.51
SYCP1-209ENST00000613524 PCDH12Q9NPG4 1184 aa5.63□□□□□ -1.51
SYCP1-209ENST00000613524 KBTBD4Q9NVX7 518 aa5.63□□□□□ -1.51
SYCP1-209ENST00000613524 DDX20Q9UHI6 824 aaKnown RBP5.63□□□□□ -1.51
SYCP1-209ENST00000613524 HCN4Q9Y3Q4 1203 aa5.63□□□□□ -1.51
SYCP1-209ENST00000613524 A0A0U1RQG5 324 aaPredicted RBP5.62□□□□□ -1.51
SYCP1-209ENST00000613524 VPS37CA5D8V6 355 aaPredicted RBP5.62□□□□□ -1.51
SYCP1-209ENST00000613524 ERVH48-1M5A8F1 160 aa5.62□□□□□ -1.51
SYCP1-209ENST00000613524 ASGR1P07306 291 aa5.62□□□□□ -1.51
SYCP1-209ENST00000613524 ACRP10323 421 aa5.62□□□□□ -1.51
SYCP1-209ENST00000613524 AMPD3Q01432 767 aa5.62□□□□□ -1.51
SYCP1-209ENST00000613524 NR5A1Q13285 461 aa5.62□□□□□ -1.51
SYCP1-209ENST00000613524 LETM2Q2VYF4 491 aa5.62□□□□□ -1.51
SYCP1-209ENST00000613524 TRIM60Q495X7 471 aa5.62□□□□□ -1.51
SYCP1-209ENST00000613524 VARS2Q5ST30 1063 aaKnown RBP5.62□□□□□ -1.51
SYCP1-209ENST00000613524 NECAB2Q7Z6G3 386 aa5.62□□□□□ -1.51
SYCP1-209ENST00000613524 CKAP2LQ8IYA6 745 aa5.62□□□□□ -1.51
SYCP1-209ENST00000613524 RNPC3Q96LT9 517 aaKnown RBP5.62□□□□□ -1.51
SYCP1-209ENST00000613524 SPC25Q9HBM1 224 aa5.62□□□□□ -1.51
SYCP1-209ENST00000613524 ZCCHC17Q9NP64 241 aaKnown RBP5.62□□□□□ -1.51
SYCP1-209ENST00000613524 STARD7Q9NQZ5 370 aa5.62□□□□□ -1.51
SYCP1-209ENST00000613524 TCP11L1Q9NUJ3 509 aa5.62□□□□□ -1.51
SYCP1-209ENST00000613524 FBXO40Q9UH90 709 aa5.62□□□□□ -1.51
SYCP1-209ENST00000613524 EIF1AYO14602 144 aaKnown RBP5.62□□□□□ -1.51
SYCP1-209ENST00000613524 BACH1O14867 736 aa5.62□□□□□ -1.51
SYCP1-209ENST00000613524 ACTN4O43707 911 aaKnown RBP5.62□□□□□ -1.51
SYCP1-209ENST00000613524 GGPS1O95749 300 aa5.62□□□□□ -1.51
SYCP1-209ENST00000613524 PCP11498 1178 aaKnown RBP5.62□□□□□ -1.51
SYCP1-209ENST00000613524 ADCY7P51828 1080 aa5.62□□□□□ -1.51
SYCP1-209ENST00000613524 EPHA4P54764 986 aa5.62□□□□□ -1.51
SYCP1-209ENST00000613524 ZNF200P98182 395 aaPredicted RBP5.62□□□□□ -1.51
SYCP1-209ENST00000613524 EXOSC10Q01780 885 aaKnown RBP5.62□□□□□ -1.51
SYCP1-209ENST00000613524 ARID5BQ14865 1188 aa5.62□□□□□ -1.51
SYCP1-209ENST00000613524 LRRC26Q2I0M4 334 aa5.62□□□□□ -1.51
SYCP1-209ENST00000613524 ZNF792Q3KQV3 632 aa5.62□□□□□ -1.51
SYCP1-209ENST00000613524 PRR16Q569H4 304 aa5.62□□□□□ -1.51
SYCP1-209ENST00000613524 CCDC178Q5BJE1 867 aa5.62□□□□□ -1.51
SYCP1-209ENST00000613524 CPLX2Q6PUV4 134 aaKnown RBP5.62□□□□□ -1.51
SYCP1-209ENST00000613524 SPNS2Q8IVW8 549 aa5.62□□□□□ -1.51
SYCP1-209ENST00000613524 UBR7Q8N806 425 aa5.62□□□□□ -1.51
SYCP1-209ENST00000613524 CHST13Q8NET6 341 aa5.62□□□□□ -1.51
SYCP1-209ENST00000613524 GBP4Q96PP9 640 aa5.62□□□□□ -1.51
SYCP1-209ENST00000613524 TRPV6Q9H1D0 765 aa5.62□□□□□ -1.51
SYCP1-209ENST00000613524 ADD3Q9UEY8 706 aaKnown RBP5.62□□□□□ -1.51
SYCP1-209ENST00000613524 SEPT4O43236 478 aa5.61□□□□□ -1.51
SYCP1-209ENST00000613524 FAM13AO94988 1023 aa5.61□□□□□ -1.51
SYCP1-209ENST00000613524 AKR1A1P14550 325 aa5.61□□□□□ -1.51
SYCP1-209ENST00000613524 GNA15P30679 374 aa5.61□□□□□ -1.51
SYCP1-209ENST00000613524 GJA8P48165 433 aa5.61□□□□□ -1.51
SYCP1-209ENST00000613524 LRRC41Q15345 812 aa5.61□□□□□ -1.51
SYCP1-209ENST00000613524 INF2Q27J81 1249 aa5.61□□□□□ -1.51
SYCP1-209ENST00000613524 SKOR2Q2VWA4 1001 aaPredicted RBP5.61□□□□□ -1.51
SYCP1-209ENST00000613524 PIK3AP1Q6ZUJ8 805 aa5.61□□□□□ -1.51
SYCP1-209ENST00000613524 TMCO2Q7Z6W1 182 aaPredicted RBP5.61□□□□□ -1.51
SYCP1-209ENST00000613524 TMTC2Q8N394 836 aa5.61□□□□□ -1.51
SYCP1-209ENST00000613524 NSUN6Q8TEA1 469 aaKnown RBP5.61□□□□□ -1.51
SYCP1-209ENST00000613524 GLG1Q92896 1179 aa5.61□□□□□ -1.51
SYCP1-209ENST00000613524 SCLYQ96I15 445 aa5.61□□□□□ -1.51
SYCP1-209ENST00000613524 FGD4Q96M96 766 aa5.61□□□□□ -1.51
SYCP1-209ENST00000613524 SPATA33Q96N06 139 aa5.61□□□□□ -1.51
SYCP1-209ENST00000613524 TRMT13Q9NUP7 481 aaKnown RBP5.61□□□□□ -1.51
SYCP1-209ENST00000613524 STIM2Q9P246 746 aa5.61□□□□□ -1.51
SYCP1-209ENST00000613524 FAM184BQ9ULE4 1060 aa5.61□□□□□ -1.51
SYCP1-209ENST00000613524 PCDHB3Q9Y5E6 796 aa5.61□□□□□ -1.51
SYCP1-209ENST00000613524 ZMYM6O95789 1325 aa5.61□□□□□ -1.51
SYCP1-209ENST00000613524 CNTNAP5Q8WYK1 1306 aa5.61□□□□□ -1.51
SYCP1-209ENST00000613524 SYNRGQ9UMZ2 1314 aa5.61□□□□□ -1.51
SYCP1-209ENST00000613524 PLIN4Q96Q06 1357 aa5.61□□□□□ -1.51
SYCP1-209ENST00000613524 ZBTB24O43167 697 aaPredicted RBP5.61□□□□□ -1.51
SYCP1-209ENST00000613524 TPD52L2O43399 206 aaKnown RBP5.61□□□□□ -1.51
SYCP1-209ENST00000613524 ATP9AO75110 1047 aa5.61□□□□□ -1.51
Retrieved 100 of 20,778 RNA–protein pairs in 26.4 ms