RNA–Protein interactions for RNA: ENST00000610462.1

CSPG5-205, Transcript of chondroitin sulfate proteoglycan 5, humanhuman

TSL 5 BASIC

Gene CSPG5, Length 2,073 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CSPG5-205ENST00000610462 MUM1L1Q5H9M0 696 aa30.88■■■□□ 2.53
CSPG5-205ENST00000610462 DCAF15Q66K64 600 aa30.88■■■□□ 2.53
CSPG5-205ENST00000610462 MYCT1Q8N699 235 aa30.88■■■□□ 2.53
CSPG5-205ENST00000610462 SYN2Q92777 582 aaPredicted RBP30.88■■■□□ 2.53
CSPG5-205ENST00000610462 PURBQ96QR8 312 aaKnown RBP30.88■■■□□ 2.53
CSPG5-205ENST00000610462 KCNH7Q9NS40 1196 aa30.88■■■□□ 2.53
CSPG5-205ENST00000610462 OGFRQ9NZT2 677 aa30.88■■■□□ 2.53
CSPG5-205ENST00000610462 ARMCX3Q9UH62 379 aaPredicted RBP30.88■■■□□ 2.53
CSPG5-205ENST00000610462 PNMA2Q9UL42 364 aa30.88■■■□□ 2.53
CSPG5-205ENST00000610462 MYH11P35749 1972 aa30.87■■■□□ 2.53
CSPG5-205ENST00000610462 RPL13P26373 211 aaKnown RBP30.87■■■□□ 2.53
CSPG5-205ENST00000610462 EPS15P42566 896 aa30.87■■■□□ 2.53
CSPG5-205ENST00000610462 PCNX4Q63HM2 1172 aa30.87■■■□□ 2.53
CSPG5-205ENST00000610462 SYTL5Q8TDW5 730 aaPredicted RBP30.87■■■□□ 2.53
CSPG5-205ENST00000610462 LXNQ9BS40 222 aa30.87■■■□□ 2.53
CSPG5-205ENST00000610462 DEF6Q9H4E7 631 aa30.87■■■□□ 2.53
CSPG5-205ENST00000610462 PARVGQ9HBI0 331 aa30.87■■■□□ 2.53
CSPG5-205ENST00000610462 SEL1LQ9UBV2 794 aa30.87■■■□□ 2.53
CSPG5-205ENST00000610462 MYO6Q9UM54 1294 aa30.87■■■□□ 2.53
CSPG5-205ENST00000610462 UBIAD1Q9Y5Z9 338 aa30.87■■■□□ 2.53
CSPG5-205ENST00000610462 NR3C1P04150 777 aa30.86■■■□□ 2.53
CSPG5-205ENST00000610462 KIF5AQ12840 1032 aa30.86■■■□□ 2.53
CSPG5-205ENST00000610462 RPAP3Q9H6T3 665 aaPredicted RBP30.86■■■□□ 2.53
CSPG5-205ENST00000610462 SPDYE4A6NLX3 237 aa30.86■■■□□ 2.53
CSPG5-205ENST00000610462 MAPK8IP2Q13387 824 aaPredicted RBP30.86■■■□□ 2.53
CSPG5-205ENST00000610462 NLRC4Q9NPP4 1024 aa30.86■■■□□ 2.53
CSPG5-205ENST00000610462 ZNF446Q9NWS9 450 aa30.86■■■□□ 2.53
CSPG5-205ENST00000610462 PUF60Q9UHX1 559 aaKnown RBP30.86■■■□□ 2.53
CSPG5-205ENST00000610462 ODF2LQ9ULJ1 636 aa30.86■■■□□ 2.53
CSPG5-205ENST00000610462 PCDHA13Q9Y5I0 950 aa30.86■■■□□ 2.53
CSPG5-205ENST00000610462 SLC16A3O15427 465 aaKnown RBP30.85■■■□□ 2.53
CSPG5-205ENST00000610462 ZBED4O75132 1171 aa30.85■■■□□ 2.53
CSPG5-205ENST00000610462 ZNF131P52739 623 aa30.85■■■□□ 2.53
CSPG5-205ENST00000610462 TKFCQ3LXA3 575 aa30.85■■■□□ 2.53
CSPG5-205ENST00000610462 CRACR2AQ9BSW2 395 aa30.85■■■□□ 2.53
CSPG5-205ENST00000610462 HOMER2Q9NSB8 354 aa30.85■■■□□ 2.53
CSPG5-205ENST00000610462 CTDP1Q9Y5B0 961 aaPredicted RBP30.85■■■□□ 2.53
CSPG5-205ENST00000610462 SSU72P8A0A1W2PR75 194 aa30.85■■■□□ 2.53
CSPG5-205ENST00000610462 USO1O60763 962 aaKnown RBP30.85■■■□□ 2.53
CSPG5-205ENST00000610462 FDX1P10109 184 aa30.85■■■□□ 2.53
CSPG5-205ENST00000610462 MIER3Q7Z3K6 550 aa30.85■■■□□ 2.53
CSPG5-205ENST00000610462 SMAP1Q8IYB5 467 aaPredicted RBP30.85■■■□□ 2.53
CSPG5-205ENST00000610462 SCYL3Q8IZE3 742 aa30.85■■■□□ 2.53
CSPG5-205ENST00000610462 BANK1Q8NDB2 785 aa30.85■■■□□ 2.53
CSPG5-205ENST00000610462 IFIH1Q9BYX4 1025 aaKnown RBP30.85■■■□□ 2.53
CSPG5-205ENST00000610462 METTL14Q9HCE5 456 aaKnown RBP30.85■■■□□ 2.53
CSPG5-205ENST00000610462 JADE2Q9NQC1 790 aa30.85■■■□□ 2.53
CSPG5-205ENST00000610462 ZNF112Q9UJU3 913 aa30.85■■■□□ 2.53
CSPG5-205ENST00000610462 DDX39AO00148 427 aaKnown RBP30.84■■■□□ 2.53
CSPG5-205ENST00000610462 DHX15O43143 795 aaKnown RBP30.84■■■□□ 2.53
CSPG5-205ENST00000610462 AKR1B10O60218 316 aa30.84■■■□□ 2.53
CSPG5-205ENST00000610462 NMT1P30419 496 aaKnown RBP30.84■■■□□ 2.53
CSPG5-205ENST00000610462 POLR2FP61218 127 aaKnown RBP30.84■■■□□ 2.53
CSPG5-205ENST00000610462 TUBB4BP68371 445 aa30.84■■■□□ 2.53
CSPG5-205ENST00000610462 SFMBT2Q5VUG0 894 aa30.84■■■□□ 2.53
CSPG5-205ENST00000610462 HGSNATQ68CP4 663 aa30.84■■■□□ 2.53
CSPG5-205ENST00000610462 AGO4Q9HCK5 861 aaKnown RBP30.84■■■□□ 2.53
CSPG5-205ENST00000610462 UBE4BO95155 1302 aa30.83■■■□□ 2.53
CSPG5-205ENST00000610462 AKAP3O75969 853 aa30.83■■■□□ 2.53
CSPG5-205ENST00000610462 AFPP02771 609 aaKnown RBP30.83■■■□□ 2.53
CSPG5-205ENST00000610462 MRPS9P82933 396 aaKnown RBP30.83■■■□□ 2.53
CSPG5-205ENST00000610462 KCNA1Q09470 495 aa30.83■■■□□ 2.53
CSPG5-205ENST00000610462 SPP2Q13103 211 aa30.83■■■□□ 2.53
CSPG5-205ENST00000610462 NFIL3Q16649 462 aa30.83■■■□□ 2.53
CSPG5-205ENST00000610462 ASTE1Q2TB18 679 aaPredicted RBP30.83■■■□□ 2.53
CSPG5-205ENST00000610462 TRAPPC11Q7Z392 1133 aa30.83■■■□□ 2.53
CSPG5-205ENST00000610462 EPC1Q9H2F5 836 aa30.83■■■□□ 2.53
CSPG5-205ENST00000610462 ZSWIM4Q9H7M6 989 aa30.83■■■□□ 2.53
CSPG5-205ENST00000610462 ZMYM2Q9UBW7 1377 aa30.83■■■□□ 2.53
CSPG5-205ENST00000610462 TGFB1I1O43294 461 aa30.83■■■□□ 2.53
CSPG5-205ENST00000610462 GUCY2CP25092 1073 aa30.83■■■□□ 2.53
CSPG5-205ENST00000610462 CBX1P83916 185 aa30.83■■■□□ 2.53
CSPG5-205ENST00000610462 TAAR1Q96RJ0 339 aa30.83■■■□□ 2.53
CSPG5-205ENST00000610462 FIZ1Q96SL8 496 aa30.83■■■□□ 2.53
CSPG5-205ENST00000610462 GANQ9H2C0 597 aa30.83■■■□□ 2.53
CSPG5-205ENST00000610462 PKD2L1Q9P0L9 805 aa30.83■■■□□ 2.53
CSPG5-205ENST00000610462 ARHGEF35A5YM69 484 aa30.82■■■□□ 2.52
CSPG5-205ENST00000610462 EPB41P11171 864 aaKnown RBP30.82■■■□□ 2.52
CSPG5-205ENST00000610462 RPS6P62753 249 aaKnown RBP30.82■■■□□ 2.52
CSPG5-205ENST00000610462 PAPD7Q5XG87 772 aaKnown RBP30.82■■■□□ 2.52
CSPG5-205ENST00000610462 SGIP1Q9BQI5 828 aa30.82■■■□□ 2.52
CSPG5-205ENST00000610462 AS3MTQ9HBK9 375 aa30.82■■■□□ 2.52
CSPG5-205ENST00000610462 DUSP10Q9Y6W6 482 aa30.82■■■□□ 2.52
CSPG5-205ENST00000610462 SERPING1P05155 500 aa30.82■■■□□ 2.52
CSPG5-205ENST00000610462 P4HBP07237 508 aaKnown RBP30.82■■■□□ 2.52
CSPG5-205ENST00000610462 XRCC5P13010 732 aaKnown RBP30.82■■■□□ 2.52
CSPG5-205ENST00000610462 ZSCAN20P17040 1043 aaPredicted RBP30.82■■■□□ 2.52
CSPG5-205ENST00000610462 BACE1P56817 501 aa30.82■■■□□ 2.52
CSPG5-205ENST00000610462 SLC9C1Q4G0N8 1177 aa30.82■■■□□ 2.52
CSPG5-205ENST00000610462 SECISBP2LQ93073 1101 aaKnown RBP30.82■■■□□ 2.52
CSPG5-205ENST00000610462 CLIC2O15247 247 aa30.81■■■□□ 2.52
CSPG5-205ENST00000610462 ITGB3BPQ13352 177 aaPredicted RBP30.81■■■□□ 2.52
CSPG5-205ENST00000610462 STXBP4Q6ZWJ1 553 aa30.81■■■□□ 2.52
CSPG5-205ENST00000610462 ZNF720Q7Z2F6 126 aa30.81■■■□□ 2.52
CSPG5-205ENST00000610462 TRERF1Q96PN7 1200 aa30.81■■■□□ 2.52
CSPG5-205ENST00000610462 ZNF541Q9H0D2 1346 aa30.81■■■□□ 2.52
CSPG5-205ENST00000610462 VWA5AO00534 786 aa30.8■■■□□ 2.52
CSPG5-205ENST00000610462 TLR2O60603 784 aa30.8■■■□□ 2.52
CSPG5-205ENST00000610462 ATP1A1P05023 1023 aaKnown RBP30.8■■■□□ 2.52
CSPG5-205ENST00000610462 PGM5Q15124 567 aa30.8■■■□□ 2.52
Retrieved 100 of 20,778 RNA–protein pairs in 69.9 ms