RNA–Protein interactions for RNA: ENST00000606715.3

SHANK2-219, Transcript of SH3 and multiple ankyrin repeat domains 2, humanhuman

Gene SHANK2, Length 5,738 nt, Biotype retained intron.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SHANK2-219ENST00000606715 CHRNA5P30532 468 aa11.91□□□□□ -0.5
SHANK2-219ENST00000606715 PPP4R3CPQ6ZMV5 832 aa11.91□□□□□ -0.5
SHANK2-219ENST00000606715 CCDC170Q8IYT3 715 aa11.91□□□□□ -0.5
SHANK2-219ENST00000606715 MSTO1Q9BUK6 570 aa11.91□□□□□ -0.5
SHANK2-219ENST00000606715 GINM1Q9NU53 330 aa11.91□□□□□ -0.5
SHANK2-219ENST00000606715 ITSN1Q15811 1721 aa11.91□□□□□ -0.5
SHANK2-219ENST00000606715 FKBP3Q00688 224 aaKnown RBP11.91□□□□□ -0.5
SHANK2-219ENST00000606715 KRT76Q01546 638 aa11.91□□□□□ -0.5
SHANK2-219ENST00000606715 SLC12A1Q13621 1099 aa11.91□□□□□ -0.5
SHANK2-219ENST00000606715 EXOC3L4Q17RC7 722 aa11.91□□□□□ -0.5
SHANK2-219ENST00000606715 FAM71BQ8TC56 605 aa11.91□□□□□ -0.5
SHANK2-219ENST00000606715 DONSONQ9NYP3 566 aa11.91□□□□□ -0.5
SHANK2-219ENST00000606715 EIF3CLB5ME19 914 aaKnown RBP11.91□□□□□ -0.5
SHANK2-219ENST00000606715 K7ERI5 159 aa11.91□□□□□ -0.5
SHANK2-219ENST00000606715 PMLP29590 882 aa11.91□□□□□ -0.5
SHANK2-219ENST00000606715 PHKA2P46019 1235 aa11.91□□□□□ -0.5
SHANK2-219ENST00000606715 EIF3CQ99613 913 aaKnown RBP11.91□□□□□ -0.5
SHANK2-219ENST00000606715 PARVGQ9HBI0 331 aa11.91□□□□□ -0.5
SHANK2-219ENST00000606715 USP42Q9H9J4 1324 aaKnown RBP11.9□□□□□ -0.5
SHANK2-219ENST00000606715 CYP2D7A0A087X1C5 515 aa11.9□□□□□ -0.5
SHANK2-219ENST00000606715 TROVE2P10155 538 aaKnown RBP eCLIP11.9□□□□□ -0.5
SHANK2-219ENST00000606715 CD58P19256 250 aa11.9□□□□□ -0.5
SHANK2-219ENST00000606715 GRM4Q14833 912 aa11.9□□□□□ -0.5
SHANK2-219ENST00000606715 PFKFB3Q16875 520 aaPredicted RBP11.9□□□□□ -0.5
SHANK2-219ENST00000606715 ACCSLQ4AC99 568 aa11.9□□□□□ -0.5
SHANK2-219ENST00000606715 KCNV1Q6PIU1 500 aa11.9□□□□□ -0.5
SHANK2-219ENST00000606715 C10orf67Q8IYJ2 551 aa11.9□□□□□ -0.5
SHANK2-219ENST00000606715 MCPH1Q8NEM0 835 aa11.9□□□□□ -0.5
SHANK2-219ENST00000606715 TRIM58Q8NG06 486 aa11.9□□□□□ -0.5
SHANK2-219ENST00000606715 CDC26Q8NHZ8 85 aa11.9□□□□□ -0.5
SHANK2-219ENST00000606715 DACT3Q96B18 629 aaPredicted RBP11.9□□□□□ -0.5
SHANK2-219ENST00000606715 USP17L15C9J2P7 530 aa11.9□□□□□ -0.5
SHANK2-219ENST00000606715 USP17L13C9JLJ4 530 aa11.9□□□□□ -0.5
SHANK2-219ENST00000606715 USP17L11C9JVI0 530 aa11.9□□□□□ -0.5
SHANK2-219ENST00000606715 USP17L18D6R9N7 530 aa11.9□□□□□ -0.5
SHANK2-219ENST00000606715 USP17L22D6RA61 530 aa11.9□□□□□ -0.5
SHANK2-219ENST00000606715 USP17L17D6RBQ6 530 aa11.9□□□□□ -0.5
SHANK2-219ENST00000606715 USP17L19D6RCP7 530 aa11.9□□□□□ -0.5
SHANK2-219ENST00000606715 USP17L20D6RJB6 530 aa11.9□□□□□ -0.5
SHANK2-219ENST00000606715 ATF2P15336 505 aa11.9□□□□□ -0.5
SHANK2-219ENST00000606715 SFNP31947 248 aa11.9□□□□□ -0.5
SHANK2-219ENST00000606715 USP17L24Q0WX57 530 aa11.9□□□□□ -0.5
SHANK2-219ENST00000606715 SCARA5Q6ZMJ2 495 aa11.9□□□□□ -0.5
SHANK2-219ENST00000606715 SPATA17Q96L03 361 aa11.9□□□□□ -0.5
SHANK2-219ENST00000606715 C19orf81C9J6K1 198 aa11.9□□□□□ -0.5
SHANK2-219ENST00000606715 CACNB3P54284 484 aa11.9□□□□□ -0.5
SHANK2-219ENST00000606715 TNFAIP2Q03169 654 aa11.9□□□□□ -0.5
SHANK2-219ENST00000606715 ARHGEF18Q6ZSZ5 1173 aa11.9□□□□□ -0.5
SHANK2-219ENST00000606715 MICALL2Q8IY33 904 aa11.9□□□□□ -0.5
SHANK2-219ENST00000606715 LINC00301Q8NCQ3 95 aa11.9□□□□□ -0.5
SHANK2-219ENST00000606715 AFG1LQ8WV93 481 aa11.9□□□□□ -0.5
SHANK2-219ENST00000606715 SGK1O00141 431 aa11.9□□□□□ -0.5
SHANK2-219ENST00000606715 KCNK3O14649 394 aa11.9□□□□□ -0.5
SHANK2-219ENST00000606715 NDUFA8P51970 172 aa11.9□□□□□ -0.5
SHANK2-219ENST00000606715 EVCP57679 992 aa11.9□□□□□ -0.5
SHANK2-219ENST00000606715 ANKRD42Q8N9B4 389 aa11.9□□□□□ -0.5
SHANK2-219ENST00000606715 LPAR1Q92633 364 aa11.9□□□□□ -0.5
SHANK2-219ENST00000606715 SDCCAG3Q96C92 435 aa11.9□□□□□ -0.5
SHANK2-219ENST00000606715 RAVER2Q9HCJ3 691 aaKnown RBP11.9□□□□□ -0.5
SHANK2-219ENST00000606715 LDHAP00338 332 aaKnown RBP11.89□□□□□ -0.51
SHANK2-219ENST00000606715 HOXA13P31271 388 aaPredicted RBP11.89□□□□□ -0.51
SHANK2-219ENST00000606715 SNAP25P60880 206 aa11.89□□□□□ -0.51
SHANK2-219ENST00000606715 MMEL1Q495T6 779 aa11.89□□□□□ -0.51
SHANK2-219ENST00000606715 LARP7Q4G0J3 582 aaKnown RBP eCLIP11.89□□□□□ -0.51
SHANK2-219ENST00000606715 CCDC13Q8IYE1 715 aa11.89□□□□□ -0.51
SHANK2-219ENST00000606715 BBOF1Q8ND07 529 aa11.89□□□□□ -0.51
SHANK2-219ENST00000606715 TYW1Q9NV66 732 aaKnown RBP11.89□□□□□ -0.51
SHANK2-219ENST00000606715 IGF2BP2Q9Y6M1 599 aaKnown RBP eCLIP11.89□□□□□ -0.51
SHANK2-219ENST00000606715 MEIS1O00470 390 aa11.89□□□□□ -0.51
SHANK2-219ENST00000606715 KRIT1O00522 736 aa11.89□□□□□ -0.51
SHANK2-219ENST00000606715 HUS1O60921 280 aa11.89□□□□□ -0.51
SHANK2-219ENST00000606715 CPB1P15086 417 aa11.89□□□□□ -0.51
SHANK2-219ENST00000606715 TKFCQ3LXA3 575 aa11.89□□□□□ -0.51
SHANK2-219ENST00000606715 FAM83BQ5T0W9 1011 aa11.89□□□□□ -0.51
SHANK2-219ENST00000606715 ZNF658Q5TYW1 1059 aaPredicted RBP11.89□□□□□ -0.51
SHANK2-219ENST00000606715 CLIC6Q96NY7 704 aa11.89□□□□□ -0.51
SHANK2-219ENST00000606715 EFCC1Q9HA90 598 aa11.89□□□□□ -0.51
SHANK2-219ENST00000606715 FRMD4AQ9P2Q2 1039 aaPredicted RBP11.89□□□□□ -0.51
SHANK2-219ENST00000606715 CEMIPQ8WUJ3 1361 aa11.89□□□□□ -0.51
SHANK2-219ENST00000606715 PRPSAP2O60256 369 aa11.89□□□□□ -0.51
SHANK2-219ENST00000606715 SREBF2Q12772 1141 aa11.89□□□□□ -0.51
SHANK2-219ENST00000606715 SEMA3FQ13275 785 aa11.89□□□□□ -0.51
SHANK2-219ENST00000606715 GBP7Q8N8V2 638 aaPredicted RBP11.89□□□□□ -0.51
SHANK2-219ENST00000606715 P2RX5Q93086 422 aa11.89□□□□□ -0.51
SHANK2-219ENST00000606715 MRFAP1L1Q96HT8 127 aa11.89□□□□□ -0.51
SHANK2-219ENST00000606715 KDM6AO15550 1401 aaPredicted RBP11.89□□□□□ -0.51
SHANK2-219ENST00000606715 IKBKBO14920 756 aa11.89□□□□□ -0.51
SHANK2-219ENST00000606715 TFRCP02786 760 aaKnown RBP11.89□□□□□ -0.51
SHANK2-219ENST00000606715 NR2F2P24468 414 aa11.89□□□□□ -0.51
SHANK2-219ENST00000606715 DNAJC24Q6P3W2 148 aa11.89□□□□□ -0.51
SHANK2-219ENST00000606715 FAM186BQ8IYM0 893 aa11.89□□□□□ -0.51
SHANK2-219ENST00000606715 THNSL1Q8IYQ7 743 aa11.89□□□□□ -0.51
SHANK2-219ENST00000606715 MGARPQ8TDB4 240 aa11.89□□□□□ -0.51
SHANK2-219ENST00000606715 RMDN3Q96TC7 470 aa11.89□□□□□ -0.51
SHANK2-219ENST00000606715 ACAD9Q9H845 621 aa11.89□□□□□ -0.51
SHANK2-219ENST00000606715 CNOT7Q9UIV1 285 aaKnown RBP11.89□□□□□ -0.51
SHANK2-219ENST00000606715 ASB14A6NK59 587 aa11.89□□□□□ -0.51
SHANK2-219ENST00000606715 NTSR2O95665 410 aa11.89□□□□□ -0.51
SHANK2-219ENST00000606715 H2AFZP0C0S5 128 aa11.89□□□□□ -0.51
SHANK2-219ENST00000606715 STX2P32856 288 aa11.89□□□□□ -0.51
Retrieved 100 of 20,778 RNA–protein pairs in 37.9 ms