RNA–Protein interactions for RNA: ENST00000593764.5

SHKBP1-202, Transcript of SH3KBP1 binding protein 1, humanhuman

TSL 3

Gene SHKBP1, Length 870 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SHKBP1-202ENST00000593764 CCDC194A0A1B0GVG4 234 aa20.91■□□□□ 0.94
SHKBP1-202ENST00000593764 ZBTB42B2RXF5 422 aa20.91■□□□□ 0.94
SHKBP1-202ENST00000593764 HBP1O60381 514 aa20.91■□□□□ 0.94
SHKBP1-202ENST00000593764 GAS7O60861 476 aa20.91■□□□□ 0.94
SHKBP1-202ENST00000593764 PSAPP07602 524 aa20.91■□□□□ 0.94
SHKBP1-202ENST00000593764 DEFB103AP81534 67 aa20.91■□□□□ 0.94
SHKBP1-202ENST00000593764 NR5A1Q13285 461 aa20.91■□□□□ 0.94
SHKBP1-202ENST00000593764 IKBKEQ14164 716 aa20.91■□□□□ 0.94
SHKBP1-202ENST00000593764 LRCH2Q5VUJ6 765 aa20.91■□□□□ 0.94
SHKBP1-202ENST00000593764 B3GNT9Q6UX72 402 aa20.91■□□□□ 0.94
SHKBP1-202ENST00000593764 PIK3AP1Q6ZUJ8 805 aa20.91■□□□□ 0.94
SHKBP1-202ENST00000593764 HERC6Q8IVU3 1022 aa20.91■□□□□ 0.94
SHKBP1-202ENST00000593764 PRUNE2Q8WUY3 3088 aa20.91■□□□□ 0.94
SHKBP1-202ENST00000593764 UNC45AQ9H3U1 944 aa20.91■□□□□ 0.94
SHKBP1-202ENST00000593764 DISC1Q9NRI5 854 aa20.91■□□□□ 0.94
SHKBP1-202ENST00000593764 PCDHA2Q9Y5H9 948 aa20.91■□□□□ 0.94
SHKBP1-202ENST00000593764 WDR64B1ANS9 1081 aa20.9■□□□□ 0.94
SHKBP1-202ENST00000593764 SLC37A4O43826 429 aa20.9■□□□□ 0.94
SHKBP1-202ENST00000593764 LETM2Q2VYF4 491 aa20.9■□□□□ 0.94
SHKBP1-202ENST00000593764 PPP4R3AQ6IN85 833 aa20.9■□□□□ 0.94
SHKBP1-202ENST00000593764 MTHFD1LQ6UB35 978 aa20.9■□□□□ 0.94
SHKBP1-202ENST00000593764 NEK8Q86SG6 692 aa20.9■□□□□ 0.94
SHKBP1-202ENST00000593764 CCDC83Q8IWF9 413 aa20.9■□□□□ 0.94
SHKBP1-202ENST00000593764 MYLIPQ8WY64 445 aa20.9■□□□□ 0.94
SHKBP1-202ENST00000593764 TEKT3Q9BXF9 490 aa20.9■□□□□ 0.94
SHKBP1-202ENST00000593764 GABBR1Q9UBS5 961 aa20.9■□□□□ 0.94
SHKBP1-202ENST00000593764 DDX25Q9UHL0 483 aaKnown RBP20.9■□□□□ 0.94
SHKBP1-202ENST00000593764 PTPRSQ13332 1948 aa20.9■□□□□ 0.94
SHKBP1-202ENST00000593764 MYH9P35579 1960 aaKnown RBP20.89■□□□□ 0.93
SHKBP1-202ENST00000593764 FAM205CA6NFA0 338 aa20.89■□□□□ 0.93
SHKBP1-202ENST00000593764 ZNF862O60290 1169 aa20.89■□□□□ 0.93
SHKBP1-202ENST00000593764 EFCAB14O75071 495 aa20.89■□□□□ 0.93
SHKBP1-202ENST00000593764 KLRC1P26715 233 aa20.89■□□□□ 0.93
SHKBP1-202ENST00000593764 KRT2P35908 639 aa20.89■□□□□ 0.93
SHKBP1-202ENST00000593764 KCNJ6P48051 423 aa20.89■□□□□ 0.93
SHKBP1-202ENST00000593764 TMCO2Q7Z6W1 182 aaPredicted RBP20.89■□□□□ 0.93
SHKBP1-202ENST00000593764 RSPH3Q86UC2 560 aa20.89■□□□□ 0.93
SHKBP1-202ENST00000593764 ZSCAN31Q96LW9 406 aaPredicted RBP20.89■□□□□ 0.93
SHKBP1-202ENST00000593764 TCEAL9Q9UHQ7 104 aa20.89■□□□□ 0.93
SHKBP1-202ENST00000593764 SAMM50Q9Y512 469 aa20.89■□□□□ 0.93
SHKBP1-202ENST00000593764 IGSF9BQ9UPX0 1349 aa20.88■□□□□ 0.93
SHKBP1-202ENST00000593764 A0A0C4DFX4 3053 aa20.88■□□□□ 0.93
SHKBP1-202ENST00000593764 MMP1P03956 469 aa20.88■□□□□ 0.93
SHKBP1-202ENST00000593764 ZNF484Q5JVG2 852 aa20.88■□□□□ 0.93
SHKBP1-202ENST00000593764 KRT40Q6A162 431 aa20.88■□□□□ 0.93
SHKBP1-202ENST00000593764 LIN28BQ6ZN17 250 aaKnown RBP eCLIP20.88■□□□□ 0.93
SHKBP1-202ENST00000593764 BBXQ8WY36 941 aaPredicted RBP20.88■□□□□ 0.93
SHKBP1-202ENST00000593764 SEPT8Q92599 483 aa20.88■□□□□ 0.93
SHKBP1-202ENST00000593764 LLPHQ9BRT6 129 aaKnown RBP20.88■□□□□ 0.93
SHKBP1-202ENST00000593764 FAM49AQ9H0Q0 323 aaPredicted RBP20.88■□□□□ 0.93
SHKBP1-202ENST00000593764 SLC28A3Q9HAS3 691 aa20.88■□□□□ 0.93
SHKBP1-202ENST00000593764 KCNMB3Q9NPA1 279 aa20.88■□□□□ 0.93
SHKBP1-202ENST00000593764 CDY2AQ9Y6F7 541 aa20.88■□□□□ 0.93
SHKBP1-202ENST00000593764 WDR81Q562E7 1941 aa20.88■□□□□ 0.93
SHKBP1-202ENST00000593764 COL1A2P08123 1366 aa20.87■□□□□ 0.93
SHKBP1-202ENST00000593764 SMIM35A0A1B0GVV1 85 aa20.87■□□□□ 0.93
SHKBP1-202ENST00000593764 BTBD18B2RXH4 712 aa20.87■□□□□ 0.93
SHKBP1-202ENST00000593764 CHMP2AO43633 222 aa20.87■□□□□ 0.93
SHKBP1-202ENST00000593764 GCFC2P16383 781 aaKnown RBP20.87■□□□□ 0.93
SHKBP1-202ENST00000593764 SFNP31947 248 aa20.87■□□□□ 0.93
SHKBP1-202ENST00000593764 JAK3P52333 1124 aa20.87■□□□□ 0.93
SHKBP1-202ENST00000593764 FOSBP53539 338 aa20.87■□□□□ 0.93
SHKBP1-202ENST00000593764 MRPS6P82932 125 aaKnown RBP20.87■□□□□ 0.93
SHKBP1-202ENST00000593764 LPIN1Q14693 890 aa20.87■□□□□ 0.93
SHKBP1-202ENST00000593764 RABEP1Q15276 862 aa20.87■□□□□ 0.93
SHKBP1-202ENST00000593764 UGCGQ16739 394 aa20.87■□□□□ 0.93
SHKBP1-202ENST00000593764 CKAP2LQ8IYA6 745 aa20.87■□□□□ 0.93
SHKBP1-202ENST00000593764 SH2B1Q9NRF2 756 aaPredicted RBP20.87■□□□□ 0.93
SHKBP1-202ENST00000593764 CCNT1O60563 726 aaKnown RBP20.86■□□□□ 0.93
SHKBP1-202ENST00000593764 ARHGEF15O94989 841 aa20.86■□□□□ 0.93
SHKBP1-202ENST00000593764 RPLP2P05387 115 aaKnown RBP20.86■□□□□ 0.93
SHKBP1-202ENST00000593764 CA3P07451 260 aa20.86■□□□□ 0.93
SHKBP1-202ENST00000593764 GHRP10912 638 aa20.86■□□□□ 0.93
SHKBP1-202ENST00000593764 FBXO47Q5MNV8 452 aa20.86■□□□□ 0.93
SHKBP1-202ENST00000593764 TRMT1LQ7Z2T5 733 aaKnown RBP20.86■□□□□ 0.93
SHKBP1-202ENST00000593764 DIS3L2Q8IYB7 885 aaKnown RBP20.86■□□□□ 0.93
SHKBP1-202ENST00000593764 KIAA0319LQ8IZA0 1049 aa20.86■□□□□ 0.93
SHKBP1-202ENST00000593764 RDM1Q8NG50 284 aa20.86■□□□□ 0.93
SHKBP1-202ENST00000593764 HAS1Q92839 578 aa20.86■□□□□ 0.93
SHKBP1-202ENST00000593764 FAM20AQ96MK3 541 aa20.86■□□□□ 0.93
SHKBP1-202ENST00000593764 IFIH1Q9BYX4 1025 aaKnown RBP20.86■□□□□ 0.93
SHKBP1-202ENST00000593764 BRMS1Q9HCU9 246 aa20.86■□□□□ 0.93
SHKBP1-202ENST00000593764 SIP14410 1827 aa20.85■□□□□ 0.93
SHKBP1-202ENST00000593764 MICAL3Q7RTP6 2002 aa20.85■□□□□ 0.93
SHKBP1-202ENST00000593764 LOC101059915A0A1B0GWI6 518 aaPredicted RBP20.85■□□□□ 0.93
SHKBP1-202ENST00000593764 KIF28PB7ZC32 967 aa20.85■□□□□ 0.93
SHKBP1-202ENST00000593764 TLL1O43897 1013 aa20.85■□□□□ 0.93
SHKBP1-202ENST00000593764 GJB5O95377 273 aa20.85■□□□□ 0.93
SHKBP1-202ENST00000593764 C22orf31O95567 290 aa20.85■□□□□ 0.93
SHKBP1-202ENST00000593764 TMEM62Q0P6H9 643 aa20.85■□□□□ 0.93
SHKBP1-202ENST00000593764 IER5Q5VY09 327 aa20.85■□□□□ 0.93
SHKBP1-202ENST00000593764 PPP2R2DQ66LE6 453 aa20.85■□□□□ 0.93
SHKBP1-202ENST00000593764 MIER3Q7Z3K6 550 aa20.85■□□□□ 0.93
SHKBP1-202ENST00000593764 NME8Q8N427 588 aa20.85■□□□□ 0.93
SHKBP1-202ENST00000593764 PRDM12Q9H4Q4 367 aa20.85■□□□□ 0.93
SHKBP1-202ENST00000593764 EVPLQ92817 2033 aa20.84■□□□□ 0.93
SHKBP1-202ENST00000593764 EML1O00423 815 aa20.84■□□□□ 0.93
SHKBP1-202ENST00000593764 GUCY1B3Q02153 619 aa20.84■□□□□ 0.93
SHKBP1-202ENST00000593764 PPP2R5CQ13362 524 aa20.84■□□□□ 0.93
SHKBP1-202ENST00000593764 TRIM29Q14134 588 aa20.84■□□□□ 0.93
Retrieved 100 of 20,778 RNA–protein pairs in 61.3 ms