RNA–Protein interactions for RNA: ENST00000589838.5

PRKCSH-209, Transcript of protein kinase C substrate 80K-H, humanhuman

APPRIS P3 TSL 1 (best) BASIC

Gene PRKCSH, Length 1,898 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PRKCSH-209ENST00000589838 ZBED3Q96IU2 234 aaPredicted RBP21.06■□□□□ 0.96
PRKCSH-209ENST00000589838 MMS19Q96T76 1030 aa21.06■□□□□ 0.96
PRKCSH-209ENST00000589838 ZNF577Q9BSK1 485 aa21.06■□□□□ 0.96
PRKCSH-209ENST00000589838 CRACR2AQ9BSW2 395 aa21.06■□□□□ 0.96
PRKCSH-209ENST00000589838 UBXN6Q9BZV1 441 aa21.06■□□□□ 0.96
PRKCSH-209ENST00000589838 GANQ9H2C0 597 aa21.06■□□□□ 0.96
PRKCSH-209ENST00000589838 BZW2Q9Y6E2 419 aaKnown RBP21.06■□□□□ 0.96
PRKCSH-209ENST00000589838 MAP2K7O14733 419 aa21.05■□□□□ 0.96
PRKCSH-209ENST00000589838 TCP1P17987 556 aaKnown RBP21.05■□□□□ 0.96
PRKCSH-209ENST00000589838 KCNA3P22001 575 aa21.05■□□□□ 0.96
PRKCSH-209ENST00000589838 HOXD13P35453 343 aa21.05■□□□□ 0.96
PRKCSH-209ENST00000589838 ASIC2Q16515 512 aa21.05■□□□□ 0.96
PRKCSH-209ENST00000589838 C1orf186Q6ZWK4 172 aa21.05■□□□□ 0.96
PRKCSH-209ENST00000589838 NEK9Q8TD19 979 aa21.05■□□□□ 0.96
PRKCSH-209ENST00000589838 SLC16A10Q8TF71 515 aa21.05■□□□□ 0.96
PRKCSH-209ENST00000589838 NOX5Q96PH1 765 aa21.05■□□□□ 0.96
PRKCSH-209ENST00000589838 GINM1Q9NU53 330 aa21.05■□□□□ 0.96
PRKCSH-209ENST00000589838 TSKSQ9UJT2 592 aa21.05■□□□□ 0.96
PRKCSH-209ENST00000589838 RSPH10B2B2RC85 870 aa21.05■□□□□ 0.96
PRKCSH-209ENST00000589838 SRGAP2O75044 1071 aa21.05■□□□□ 0.96
PRKCSH-209ENST00000589838 MOCS3O95396 460 aa21.05■□□□□ 0.96
PRKCSH-209ENST00000589838 ICAM1P05362 532 aa21.05■□□□□ 0.96
PRKCSH-209ENST00000589838 RSPH10BP0C881 870 aa21.05■□□□□ 0.96
PRKCSH-209ENST00000589838 PTGER2P43116 358 aa21.05■□□□□ 0.96
PRKCSH-209ENST00000589838 GFPT1Q06210 699 aaPredicted RBP21.05■□□□□ 0.96
PRKCSH-209ENST00000589838 RAPGEF1Q13905 1077 aa21.05■□□□□ 0.96
PRKCSH-209ENST00000589838 SMC1AQ14683 1233 aaKnown RBP21.05■□□□□ 0.96
PRKCSH-209ENST00000589838 MYCT1Q8N699 235 aa21.05■□□□□ 0.96
PRKCSH-209ENST00000589838 PIGOQ8TEQ8 1089 aa21.05■□□□□ 0.96
PRKCSH-209ENST00000589838 CAPZA3Q96KX2 299 aa21.05■□□□□ 0.96
PRKCSH-209ENST00000589838 RIT2Q99578 217 aa21.05■□□□□ 0.96
PRKCSH-209ENST00000589838 PARVGQ9HBI0 331 aa21.05■□□□□ 0.96
PRKCSH-209ENST00000589838 ODF2LQ9ULJ1 636 aa21.05■□□□□ 0.96
PRKCSH-209ENST00000589838 CHMP2AO43633 222 aa21.04■□□□□ 0.96
PRKCSH-209ENST00000589838 PPP1R12BO60237 982 aaPredicted RBP21.04■□□□□ 0.96
PRKCSH-209ENST00000589838 EIF3JO75822 258 aaKnown RBP21.04■□□□□ 0.96
PRKCSH-209ENST00000589838 ITIH3Q06033 890 aa21.04■□□□□ 0.96
PRKCSH-209ENST00000589838 KLHL30Q0D2K2 578 aa21.04■□□□□ 0.96
PRKCSH-209ENST00000589838 TNIP1Q15025 636 aa21.04■□□□□ 0.96
PRKCSH-209ENST00000589838 MAP9Q49MG5 647 aa21.04■□□□□ 0.96
PRKCSH-209ENST00000589838 C10orf76Q5T2E6 689 aa21.04■□□□□ 0.96
PRKCSH-209ENST00000589838 MCF2L2Q86YR7 1114 aa21.04■□□□□ 0.96
PRKCSH-209ENST00000589838 MXRA8Q9BRK3 442 aa21.04■□□□□ 0.96
PRKCSH-209ENST00000589838 ZMYND15Q9H091 742 aa21.04■□□□□ 0.96
PRKCSH-209ENST00000589838 MLXIPQ9HAP2 919 aa21.04■□□□□ 0.96
PRKCSH-209ENST00000589838 ABCB6Q9NP58 842 aa21.04■□□□□ 0.96
PRKCSH-209ENST00000589838 PGAP2Q9UHJ9 254 aa21.04■□□□□ 0.96
PRKCSH-209ENST00000589838 L1RE1Q9UN81 338 aa21.04■□□□□ 0.96
PRKCSH-209ENST00000589838 HYOU1Q9Y4L1 999 aa21.04■□□□□ 0.96
PRKCSH-209ENST00000589838 COL4A5P29400 1685 aa21.04■□□□□ 0.96
PRKCSH-209ENST00000589838 SHTN1A0MZ66 631 aa21.03■□□□□ 0.96
PRKCSH-209ENST00000589838 TLR2O60603 784 aa21.03■□□□□ 0.96
PRKCSH-209ENST00000589838 HSD17B4P51659 736 aa21.03■□□□□ 0.96
PRKCSH-209ENST00000589838 VSNL1P62760 191 aa21.03■□□□□ 0.96
PRKCSH-209ENST00000589838 RASSF7Q02833 373 aa21.03■□□□□ 0.96
PRKCSH-209ENST00000589838 SLC18A3Q16572 532 aa21.03■□□□□ 0.96
PRKCSH-209ENST00000589838 EXOC3L4Q17RC7 722 aa21.03■□□□□ 0.96
PRKCSH-209ENST00000589838 NIPA1Q7RTP0 329 aa21.03■□□□□ 0.96
PRKCSH-209ENST00000589838 PRPF38AQ8NAV1 312 aaKnown RBP21.03■□□□□ 0.96
PRKCSH-209ENST00000589838 CCPG1Q9ULG6 757 aa21.03■□□□□ 0.96
PRKCSH-209ENST00000589838 CAPN6Q9Y6Q1 641 aa21.03■□□□□ 0.96
PRKCSH-209ENST00000589838 MYH10P35580 1976 aa21.03■□□□□ 0.96
PRKCSH-209ENST00000589838 ASTN1O14525 1302 aa21.03■□□□□ 0.96
PRKCSH-209ENST00000589838 FRMPD4Q14CM0 1322 aa21.03■□□□□ 0.96
PRKCSH-209ENST00000589838 BCRP11274 1271 aa21.03■□□□□ 0.96
PRKCSH-209ENST00000589838 CXCL9Q07325 125 aa21.03■□□□□ 0.96
PRKCSH-209ENST00000589838 CIAPIN1Q6FI81 312 aa21.03■□□□□ 0.96
PRKCSH-209ENST00000589838 GBP6Q6ZN66 633 aa21.03■□□□□ 0.96
PRKCSH-209ENST00000589838 ZNF572Q7Z3I7 529 aaPredicted RBP21.03■□□□□ 0.96
PRKCSH-209ENST00000589838 SAMD3Q8N6K7 520 aa21.03■□□□□ 0.96
PRKCSH-209ENST00000589838 LPAR1Q92633 364 aa21.03■□□□□ 0.96
PRKCSH-209ENST00000589838 FBXL5Q9UKA1 691 aa21.03■□□□□ 0.96
PRKCSH-209ENST00000589838 GTPBP10A4D1E9 387 aaKnown RBP21.02■□□□□ 0.96
PRKCSH-209ENST00000589838 IPO5O00410 1097 aaKnown RBP21.02■□□□□ 0.96
PRKCSH-209ENST00000589838 WDR46O15213 610 aaKnown RBP21.02■□□□□ 0.96
PRKCSH-209ENST00000589838 AKAP3O75969 853 aa21.02■□□□□ 0.96
PRKCSH-209ENST00000589838 ANXA13P27216 316 aa21.02■□□□□ 0.96
PRKCSH-209ENST00000589838 UBXN2AP68543 259 aa21.02■□□□□ 0.96
PRKCSH-209ENST00000589838 SAMD1Q6SPF0 538 aaPredicted RBP21.02■□□□□ 0.96
PRKCSH-209ENST00000589838 ZNF771Q7L3S4 317 aaPredicted RBP21.02■□□□□ 0.96
PRKCSH-209ENST00000589838 SPAG5Q96R06 1193 aa21.02■□□□□ 0.96
PRKCSH-209ENST00000589838 MKNK1Q9BUB5 465 aa21.02■□□□□ 0.96
PRKCSH-209ENST00000589838 ACBD3Q9H3P7 528 aa21.02■□□□□ 0.96
PRKCSH-209ENST00000589838 UNC45AQ9H3U1 944 aa21.02■□□□□ 0.96
PRKCSH-209ENST00000589838 FBXO28Q9NVF7 368 aa21.02■□□□□ 0.96
PRKCSH-209ENST00000589838 MAP3K20Q9NYL2 800 aaKnown RBP21.02■□□□□ 0.96
PRKCSH-209ENST00000589838 PNMA2Q9UL42 364 aa21.02■□□□□ 0.96
PRKCSH-209ENST00000589838 RBBP6Q7Z6E9 1792 aaKnown RBP21.02■□□□□ 0.96
PRKCSH-209ENST00000589838 WNT10BO00744 389 aa21.01■□□□□ 0.95
PRKCSH-209ENST00000589838 ARP10275 920 aa21.01■□□□□ 0.95
PRKCSH-209ENST00000589838 PSMC2P35998 433 aaKnown RBP21.01■□□□□ 0.95
PRKCSH-209ENST00000589838 ZNF131P52739 623 aa21.01■□□□□ 0.95
PRKCSH-209ENST00000589838 TNFAIP1Q13829 316 aa21.01■□□□□ 0.95
PRKCSH-209ENST00000589838 KLHDC7AQ5VTJ3 777 aa21.01■□□□□ 0.95
PRKCSH-209ENST00000589838 GOLGA5Q8TBA6 731 aa21.01■□□□□ 0.95
PRKCSH-209ENST00000589838 ZNF341Q9BYN7 854 aa21.01■□□□□ 0.95
PRKCSH-209ENST00000589838 MYOZ2Q9NPC6 264 aa21.01■□□□□ 0.95
PRKCSH-209ENST00000589838 PCDHB13Q9Y5F0 798 aa21.01■□□□□ 0.95
PRKCSH-209ENST00000589838 NAP1L1P55209 391 aaKnown RBP21.01■□□□□ 0.95
PRKCSH-209ENST00000589838 DCAF17Q5H9S7 520 aaPredicted RBP21.01■□□□□ 0.95
Retrieved 100 of 20,778 RNA–protein pairs in 73.2 ms