RNA–Protein interactions for RNA: ENST00000582933.5

PPP4R1-223, Transcript of protein phosphatase 4 regulatory subunit 1, humanhuman

TSL 4

Gene PPP4R1, Length 579 nt, Biotype processed transcript, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PPP4R1-223ENST00000582933 ADAMTS4O75173 837 aa6.8□□□□□ -1.32
PPP4R1-223ENST00000582933 DEXIO95424 95 aa6.8□□□□□ -1.32
PPP4R1-223ENST00000582933 PARNO95453 639 aaKnown RBP6.8□□□□□ -1.32
PPP4R1-223ENST00000582933 LARGE1O95461 756 aa6.8□□□□□ -1.32
PPP4R1-223ENST00000582933 PGK1P00558 417 aa6.8□□□□□ -1.32
PPP4R1-223ENST00000582933 NR3C2P08235 984 aa6.8□□□□□ -1.32
PPP4R1-223ENST00000582933 HARSP12081 509 aaKnown RBP6.8□□□□□ -1.32
PPP4R1-223ENST00000582933 CST5P28325 142 aaPredicted RBP6.8□□□□□ -1.32
PPP4R1-223ENST00000582933 CCND2P30279 289 aa6.8□□□□□ -1.32
PPP4R1-223ENST00000582933 ADCYAP1R1P41586 468 aa6.8□□□□□ -1.32
PPP4R1-223ENST00000582933 ZNF132P52740 706 aa6.8□□□□□ -1.32
PPP4R1-223ENST00000582933 NKX3-2P78367 333 aa6.8□□□□□ -1.32
PPP4R1-223ENST00000582933 AKAP17AQ02040 695 aaKnown RBP6.8□□□□□ -1.32
PPP4R1-223ENST00000582933 MLLT1Q03111 559 aaPredicted RBP6.8□□□□□ -1.32
PPP4R1-223ENST00000582933 TNFAIP2Q03169 654 aa6.8□□□□□ -1.32
PPP4R1-223ENST00000582933 GRIK3Q13003 919 aa6.8□□□□□ -1.32
PPP4R1-223ENST00000582933 AP3B2Q13367 1082 aa6.8□□□□□ -1.32
PPP4R1-223ENST00000582933 PRPF4BQ13523 1007 aaKnown RBP6.8□□□□□ -1.32
PPP4R1-223ENST00000582933 PGM5Q15124 567 aa6.8□□□□□ -1.32
PPP4R1-223ENST00000582933 LRRC41Q15345 812 aa6.8□□□□□ -1.32
PPP4R1-223ENST00000582933 STXBP2Q15833 593 aa6.8□□□□□ -1.32
PPP4R1-223ENST00000582933 UBE2SQ16763 222 aa6.8□□□□□ -1.32
PPP4R1-223ENST00000582933 ME3Q16798 604 aa6.8□□□□□ -1.32
PPP4R1-223ENST00000582933 DUSP28Q4G0W2 176 aa6.8□□□□□ -1.32
PPP4R1-223ENST00000582933 ANO1Q5XXA6 986 aa6.8□□□□□ -1.32
PPP4R1-223ENST00000582933 PCNX4Q63HM2 1172 aa6.8□□□□□ -1.32
PPP4R1-223ENST00000582933 XRRA1Q6P2D8 792 aa6.8□□□□□ -1.32
PPP4R1-223ENST00000582933 EEPD1Q7L9B9 569 aa6.8□□□□□ -1.32
PPP4R1-223ENST00000582933 RNF180Q86T96 592 aa6.8□□□□□ -1.32
PPP4R1-223ENST00000582933 TLK2Q86UE8 772 aa6.8□□□□□ -1.32
PPP4R1-223ENST00000582933 LCA5Q86VQ0 697 aa6.8□□□□□ -1.32
PPP4R1-223ENST00000582933 FCHSD1Q86WN1 690 aa6.8□□□□□ -1.32
PPP4R1-223ENST00000582933 TTC30AQ86WT1 665 aa6.8□□□□□ -1.32
PPP4R1-223ENST00000582933 ARRDC4Q8NCT1 418 aa6.8□□□□□ -1.32
PPP4R1-223ENST00000582933 CCDC148Q8NFR7 591 aa6.8□□□□□ -1.32
PPP4R1-223ENST00000582933 SMARCC2Q8TAQ2 1214 aa6.8□□□□□ -1.32
PPP4R1-223ENST00000582933 VTI1AQ96AJ9 217 aa6.8□□□□□ -1.32
PPP4R1-223ENST00000582933 BICD1Q96G01 975 aa6.8□□□□□ -1.32
PPP4R1-223ENST00000582933 MS4A3Q96HJ5 214 aa6.8□□□□□ -1.32
PPP4R1-223ENST00000582933 TAAR1Q96RJ0 339 aa6.8□□□□□ -1.32
PPP4R1-223ENST00000582933 SLC26A6Q9BXS9 759 aa6.8□□□□□ -1.32
PPP4R1-223ENST00000582933 ZMYND12Q9H0C1 365 aa6.8□□□□□ -1.32
PPP4R1-223ENST00000582933 GLT8D2Q9H1C3 349 aa6.8□□□□□ -1.32
PPP4R1-223ENST00000582933 SLC24A3Q9HC58 644 aa6.8□□□□□ -1.32
PPP4R1-223ENST00000582933 SH3GLB2Q9NR46 395 aa6.8□□□□□ -1.32
PPP4R1-223ENST00000582933 PDGFCQ9NRA1 345 aa6.8□□□□□ -1.32
PPP4R1-223ENST00000582933 SPATS2LQ9NUQ6 558 aaKnown RBP6.8□□□□□ -1.32
PPP4R1-223ENST00000582933 PLXNA1Q9UIW2 1896 aa6.8□□□□□ -1.32
PPP4R1-223ENST00000582933 DDX41Q9UJV9 622 aaKnown RBP6.8□□□□□ -1.32
PPP4R1-223ENST00000582933 BARX2Q9UMQ3 279 aaPredicted RBP6.8□□□□□ -1.32
PPP4R1-223ENST00000582933 GNEQ9Y223 722 aaKnown RBP6.8□□□□□ -1.32
PPP4R1-223ENST00000582933 FRMPD3Q5JV73 1810 aa6.8□□□□□ -1.32
PPP4R1-223ENST00000582933 MYADML2A6NDP7 307 aa6.79□□□□□ -1.32
PPP4R1-223ENST00000582933 SPDYE3A6NKU9 549 aa6.79□□□□□ -1.32
PPP4R1-223ENST00000582933 TRIM64CA6NLI5 447 aa6.79□□□□□ -1.32
PPP4R1-223ENST00000582933 KBTBD13C9JR72 458 aa6.79□□□□□ -1.32
PPP4R1-223ENST00000582933 NKRFO15226 690 aaKnown RBP eCLIP6.79□□□□□ -1.32
PPP4R1-223ENST00000582933 PPFIA3O75145 1194 aa6.79□□□□□ -1.32
PPP4R1-223ENST00000582933 STAM2O75886 525 aa6.79□□□□□ -1.32
PPP4R1-223ENST00000582933 KRT38O76015 456 aa6.79□□□□□ -1.32
PPP4R1-223ENST00000582933 RGS20O76081 388 aa6.79□□□□□ -1.32
PPP4R1-223ENST00000582933 SNUPNO95149 360 aaKnown RBP6.79□□□□□ -1.32
PPP4R1-223ENST00000582933 SMC2O95347 1197 aa6.79□□□□□ -1.32
PPP4R1-223ENST00000582933 CTDNEP1O95476 244 aa6.79□□□□□ -1.32
PPP4R1-223ENST00000582933 MSL3P1P0C860 447 aa6.79□□□□□ -1.32
PPP4R1-223ENST00000582933 SMPD1P17405 629 aa6.79□□□□□ -1.32
PPP4R1-223ENST00000582933 RPL17P18621 184 aaKnown RBP6.79□□□□□ -1.32
PPP4R1-223ENST00000582933 TIE1P35590 1138 aa6.79□□□□□ -1.32
PPP4R1-223ENST00000582933 SREBF1P36956 1147 aa6.79□□□□□ -1.32
PPP4R1-223ENST00000582933 USP8P40818 1118 aa6.79□□□□□ -1.32
PPP4R1-223ENST00000582933 ABL2P42684 1182 aa6.79□□□□□ -1.32
PPP4R1-223ENST00000582933 MAGEA9P43362 315 aa6.79□□□□□ -1.32
PPP4R1-223ENST00000582933 GJA9P57773 515 aa6.79□□□□□ -1.32
PPP4R1-223ENST00000582933 NUCB2P80303 420 aa6.79□□□□□ -1.32
PPP4R1-223ENST00000582933 DEUP1Q05D60 604 aa6.79□□□□□ -1.32
PPP4R1-223ENST00000582933 SSRP1Q08945 709 aaKnown RBP6.79□□□□□ -1.32
PPP4R1-223ENST00000582933 ST3GAL1Q11201 340 aa6.79□□□□□ -1.32
PPP4R1-223ENST00000582933 TTLL4Q14679 1199 aa6.79□□□□□ -1.32
PPP4R1-223ENST00000582933 KRT72Q14CN4 511 aa6.79□□□□□ -1.32
PPP4R1-223ENST00000582933 DBN1Q16643 649 aa6.79□□□□□ -1.32
PPP4R1-223ENST00000582933 IQSEC1Q6DN90 963 aa6.79□□□□□ -1.32
PPP4R1-223ENST00000582933 CCDC62Q6P9F0 684 aa6.79□□□□□ -1.32
PPP4R1-223ENST00000582933 MMS22LQ6ZRQ5 1243 aa6.79□□□□□ -1.32
PPP4R1-223ENST00000582933 CCDC80Q76M96 950 aa6.79□□□□□ -1.32
PPP4R1-223ENST00000582933 NECAB2Q7Z6G3 386 aa6.79□□□□□ -1.32
PPP4R1-223ENST00000582933 VSIG10LQ86VR7 867 aa6.79□□□□□ -1.32
PPP4R1-223ENST00000582933 TRIM42Q8IWZ5 723 aa6.79□□□□□ -1.32
PPP4R1-223ENST00000582933 KRT222Q8N1A0 295 aa6.79□□□□□ -1.32
PPP4R1-223ENST00000582933 REXO1Q8N1G1 1221 aaKnown RBP6.79□□□□□ -1.32
PPP4R1-223ENST00000582933 KLHDC9Q8NEP7 349 aa6.79□□□□□ -1.32
PPP4R1-223ENST00000582933 MIEF2Q96C03 454 aa6.79□□□□□ -1.32
PPP4R1-223ENST00000582933 FAXDC2Q96IV6 333 aa6.79□□□□□ -1.32
PPP4R1-223ENST00000582933 PAWRQ96IZ0 340 aaKnown RBP6.79□□□□□ -1.32
PPP4R1-223ENST00000582933 INPP4AQ96PE3 977 aaPredicted RBP6.79□□□□□ -1.32
PPP4R1-223ENST00000582933 HTATIP2Q9BUP3 242 aa6.79□□□□□ -1.32
PPP4R1-223ENST00000582933 WDR11Q9BZH6 1224 aa6.79□□□□□ -1.32
PPP4R1-223ENST00000582933 TMX1Q9H3N1 280 aa6.79□□□□□ -1.32
PPP4R1-223ENST00000582933 C11orf49Q9H6J7 331 aa6.79□□□□□ -1.32
PPP4R1-223ENST00000582933 EHMT1Q9H9B1 1298 aa6.79□□□□□ -1.32
PPP4R1-223ENST00000582933 SPC25Q9HBM1 224 aa6.79□□□□□ -1.32
Retrieved 100 of 20,778 RNA–protein pairs in 69.2 ms