RNA–Protein interactions for RNA: ENST00000580980.1

PSMD3-205, Transcript of proteasome 26S subunit, non-ATPase 3, human

TSL 2

Gene PSMD3, Length 580 nt, Biotype retained intron, Subcellular localisation Cytosol, Ribosome .

RNA		Protein				Prediction (catRAPID)		Interaction (ENCODE eCLIP)
Transcript Symbol	Ensembl Transcript ID	Gene	UniProt Accession	Length	Protein Status	Prediction Score	Prediction z-Score	p-Value	Fold Change
PSMD3-205	ENST00000580980	KRT25	Q7Z3Z0	450 aa		13.79	□□□□□ -0.2
PSMD3-205	ENST00000580980	CCDC60	Q8IWA6	550 aa	Predicted RBP	13.79	□□□□□ -0.2
PSMD3-205	ENST00000580980	NME8	Q8N427	588 aa		13.79	□□□□□ -0.2
PSMD3-205	ENST00000580980	DNAJB3	Q8WWF6	145 aa		13.79	□□□□□ -0.2
PSMD3-205	ENST00000580980	AIFM3	Q96NN9	605 aa		13.79	□□□□□ -0.2
PSMD3-205	ENST00000580980	PHF20	Q9BVI0	1012 aa		13.79	□□□□□ -0.2
PSMD3-205	ENST00000580980	COL1A2	P08123	1366 aa		13.79	□□□□□ -0.2
PSMD3-205	ENST00000580980	SMIM35	A0A1B0GVV1	85 aa		13.78	□□□□□ -0.2
PSMD3-205	ENST00000580980	WDR64	B1ANS9	1081 aa		13.78	□□□□□ -0.2
PSMD3-205	ENST00000580980		M0QZ92	97 aa		13.78	□□□□□ -0.2
PSMD3-205	ENST00000580980	SFN	P31947	248 aa		13.78	□□□□□ -0.2
PSMD3-205	ENST00000580980	MRPS6	P82932	125 aa	Known RBP	13.78	□□□□□ -0.2
PSMD3-205	ENST00000580980	TAP1	Q03518	808 aa		13.78	□□□□□ -0.2
PSMD3-205	ENST00000580980	ME3	Q16798	604 aa		13.78	□□□□□ -0.2
PSMD3-205	ENST00000580980	MTHFD1L	Q6UB35	978 aa		13.78	□□□□□ -0.2
PSMD3-205	ENST00000580980	LIN28B	Q6ZN17	250 aa	Known RBP eCLIP	13.78	□□□□□ -0.2
PSMD3-205	ENST00000580980	USP38	Q8NB14	1042 aa		13.78	□□□□□ -0.2
PSMD3-205	ENST00000580980	BBX	Q8WY36	941 aa	Predicted RBP	13.78	□□□□□ -0.2
PSMD3-205	ENST00000580980	SLC5A5	Q92911	643 aa		13.78	□□□□□ -0.2
PSMD3-205	ENST00000580980	GTF3C6	Q969F1	213 aa		13.78	□□□□□ -0.2
PSMD3-205	ENST00000580980	MBOAT7	Q96N66	472 aa		13.78	□□□□□ -0.2
PSMD3-205	ENST00000580980	IFIH1	Q9BYX4	1025 aa	Known RBP	13.78	□□□□□ -0.2
PSMD3-205	ENST00000580980	INSL6	Q9Y581	213 aa		13.78	□□□□□ -0.2
PSMD3-205	ENST00000580980	GAS7	O60861	476 aa		13.77	□□□□□ -0.21
PSMD3-205	ENST00000580980	CD2BP2	O95400	341 aa	Known RBP	13.77	□□□□□ -0.21
PSMD3-205	ENST00000580980	CTDNEP1	O95476	244 aa		13.77	□□□□□ -0.21
PSMD3-205	ENST00000580980	POU3F3	P20264	500 aa	Predicted RBP	13.77	□□□□□ -0.21
PSMD3-205	ENST00000580980	JAK3	P52333	1124 aa		13.77	□□□□□ -0.21
PSMD3-205	ENST00000580980	ADGRE1	Q14246	886 aa		13.77	□□□□□ -0.21
PSMD3-205	ENST00000580980	FBXO47	Q5MNV8	452 aa		13.77	□□□□□ -0.21
PSMD3-205	ENST00000580980	TSHZ1	Q6ZSZ6	1077 aa		13.77	□□□□□ -0.21
PSMD3-205	ENST00000580980	PHF6	Q8IWS0	365 aa	Known RBP eCLIP	13.77	□□□□□ -0.21
PSMD3-205	ENST00000580980	RDM1	Q8NG50	284 aa		13.77	□□□□□ -0.21
PSMD3-205	ENST00000580980	TOP1MT	Q969P6	601 aa		13.77	□□□□□ -0.21
PSMD3-205	ENST00000580980	FAM167A	Q96KS9	214 aa		13.77	□□□□□ -0.21
PSMD3-205	ENST00000580980	UIMC1	Q96RL1	719 aa		13.77	□□□□□ -0.21
PSMD3-205	ENST00000580980	TEKT3	Q9BXF9	490 aa		13.77	□□□□□ -0.21
PSMD3-205	ENST00000580980	OSBPL7	Q9BZF2	842 aa		13.77	□□□□□ -0.21
PSMD3-205	ENST00000580980	SH2B1	Q9NRF2	756 aa	Predicted RBP	13.77	□□□□□ -0.21
PSMD3-205	ENST00000580980	DISC1	Q9NRI5	854 aa		13.77	□□□□□ -0.21
PSMD3-205	ENST00000580980	ORC3	Q9UBD5	711 aa	Predicted RBP	13.77	□□□□□ -0.21
PSMD3-205	ENST00000580980	KCNJ14	Q9UNX9	436 aa		13.77	□□□□□ -0.21
PSMD3-205	ENST00000580980	CEP131	Q9UPN4	1083 aa		13.77	□□□□□ -0.21
PSMD3-205	ENST00000580980	LIMCH1	Q9UPQ0	1083 aa		13.77	□□□□□ -0.21
PSMD3-205	ENST00000580980	KDM3A	Q9Y4C1	1321 aa		13.77	□□□□□ -0.21
PSMD3-205	ENST00000580980	SAMM50	Q9Y512	469 aa		13.77	□□□□□ -0.21
PSMD3-205	ENST00000580980	CDY2A	Q9Y6F7	541 aa		13.77	□□□□□ -0.21
PSMD3-205	ENST00000580980	GBF1	Q92538	1859 aa		13.76	□□□□□ -0.21
PSMD3-205	ENST00000580980	IGSF9B	Q9UPX0	1349 aa		13.76	□□□□□ -0.21
PSMD3-205	ENST00000580980	CCDC194	A0A1B0GVG4	234 aa		13.76	□□□□□ -0.21
PSMD3-205	ENST00000580980	GHR	P10912	638 aa		13.76	□□□□□ -0.21
PSMD3-205	ENST00000580980	ATP4A	P20648	1035 aa		13.76	□□□□□ -0.21
PSMD3-205	ENST00000580980	IGFBP4	P22692	258 aa		13.76	□□□□□ -0.21
PSMD3-205	ENST00000580980	KLRC1	P26715	233 aa		13.76	□□□□□ -0.21
PSMD3-205	ENST00000580980	HTRA4	P83105	476 aa	Predicted RBP	13.76	□□□□□ -0.21
PSMD3-205	ENST00000580980	LPIN1	Q14693	890 aa		13.76	□□□□□ -0.21
PSMD3-205	ENST00000580980	LRCH2	Q5VUJ6	765 aa		13.76	□□□□□ -0.21
PSMD3-205	ENST00000580980	TMCO2	Q7Z6W1	182 aa	Predicted RBP	13.76	□□□□□ -0.21
PSMD3-205	ENST00000580980	CKAP2L	Q8IYA6	745 aa		13.76	□□□□□ -0.21
PSMD3-205	ENST00000580980	MYOCD	Q8IZQ8	938 aa		13.76	□□□□□ -0.21
PSMD3-205	ENST00000580980	TRAPPC12	Q8WVT3	735 aa		13.76	□□□□□ -0.21
PSMD3-205	ENST00000580980	ZSCAN31	Q96LW9	406 aa	Predicted RBP	13.76	□□□□□ -0.21
PSMD3-205	ENST00000580980	NAP1L4	Q99733	375 aa	Known RBP	13.76	□□□□□ -0.21
PSMD3-205	ENST00000580980	FAM49A	Q9H0Q0	323 aa	Predicted RBP	13.76	□□□□□ -0.21
PSMD3-205	ENST00000580980	GABBR1	Q9UBS5	961 aa		13.76	□□□□□ -0.21
PSMD3-205	ENST00000580980	TRPV2	Q9Y5S1	764 aa		13.76	□□□□□ -0.21
PSMD3-205	ENST00000580980	KAT6A	Q92794	2004 aa		13.76	□□□□□ -0.21
PSMD3-205	ENST00000580980	LOC101059915	A0A1B0GWI6	518 aa	Predicted RBP	13.75	□□□□□ -0.21
PSMD3-205	ENST00000580980	ZBTB42	B2RXF5	422 aa		13.75	□□□□□ -0.21
PSMD3-205	ENST00000580980	PSMD10	O75832	226 aa		13.75	□□□□□ -0.21
PSMD3-205	ENST00000580980	ARHGEF15	O94989	841 aa		13.75	□□□□□ -0.21
PSMD3-205	ENST00000580980	TDP2	O95551	362 aa		13.75	□□□□□ -0.21
PSMD3-205	ENST00000580980	FDPS	P14324	419 aa	Known RBP	13.75	□□□□□ -0.21
PSMD3-205	ENST00000580980	GCFC2	P16383	781 aa	Known RBP	13.75	□□□□□ -0.21
PSMD3-205	ENST00000580980	INF2	Q27J81	1249 aa		13.75	□□□□□ -0.21
PSMD3-205	ENST00000580980	PPP4R3A	Q6IN85	833 aa		13.75	□□□□□ -0.21
PSMD3-205	ENST00000580980	NEK8	Q86SG6	692 aa		13.75	□□□□□ -0.21
PSMD3-205	ENST00000580980	NECAB1	Q8N987	351 aa		13.75	□□□□□ -0.21
PSMD3-205	ENST00000580980	SP7	Q8TDD2	431 aa	Predicted RBP	13.75	□□□□□ -0.21
PSMD3-205	ENST00000580980	ZBTB10	Q96DT7	871 aa		13.75	□□□□□ -0.21
PSMD3-205	ENST00000580980	FTHL17	Q9BXU8	183 aa		13.75	□□□□□ -0.21
PSMD3-205	ENST00000580980	CELF4	Q9BZC1	486 aa	Known RBP	13.75	□□□□□ -0.21
PSMD3-205	ENST00000580980	BRMS1	Q9HCU9	246 aa		13.75	□□□□□ -0.21
PSMD3-205	ENST00000580980	NRBP2	Q9NSY0	501 aa		13.75	□□□□□ -0.21
PSMD3-205	ENST00000580980	DDX25	Q9UHL0	483 aa	Known RBP	13.75	□□□□□ -0.21
PSMD3-205	ENST00000580980	RBM19	Q9Y4C8	960 aa	Known RBP	13.75	□□□□□ -0.21
PSMD3-205	ENST00000580980	CDH23	Q9H251	3354 aa		13.74	□□□□□ -0.21
PSMD3-205	ENST00000580980	LCHN	A4D1U4	455 aa		13.74	□□□□□ -0.21
PSMD3-205	ENST00000580980	LINC01553	A4QN01	128 aa		13.74	□□□□□ -0.21
PSMD3-205	ENST00000580980		K7ELQ4	463 aa	Predicted RBP	13.74	□□□□□ -0.21
PSMD3-205	ENST00000580980	MAGEB2	O15479	319 aa		13.74	□□□□□ -0.21
PSMD3-205	ENST00000580980	GTPBP6	O43824	516 aa	Predicted RBP	13.74	□□□□□ -0.21
PSMD3-205	ENST00000580980	LARGE1	O95461	756 aa		13.74	□□□□□ -0.21
PSMD3-205	ENST00000580980	ANP32A	P39687	249 aa	Known RBP	13.74	□□□□□ -0.21
PSMD3-205	ENST00000580980	ERVK-21	P61565	698 aa		13.74	□□□□□ -0.21
PSMD3-205	ENST00000580980	LETM2	Q2VYF4	491 aa		13.74	□□□□□ -0.21
PSMD3-205	ENST00000580980	FAM117B	Q6P1L5	589 aa		13.74	□□□□□ -0.21
PSMD3-205	ENST00000580980	B3GNT9	Q6UX72	402 aa		13.74	□□□□□ -0.21
PSMD3-205	ENST00000580980	HSCB	Q8IWL3	235 aa		13.74	□□□□□ -0.21
PSMD3-205	ENST00000580980	KIAA0319L	Q8IZA0	1049 aa		13.74	□□□□□ -0.21

Retrieved 100 of 20,778 RNA–protein pairs in 36.3 ms