RNA–Protein interactions for RNA: ENST00000578205.5

RHOT1-206, Transcript of ras homolog family member T1, humanhuman

TSL 1 (best)

Gene RHOT1, Length 2,771 nt, Biotype nonsense mediated decay, Subcellular localisation Cytosol .

RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
RHOT1-206ENST00000578205 LARP7Q4G0J3 582 aaKnown RBP eCLIP4.85□□□□□ -1.63
RHOT1-206ENST00000578205 C12orf60Q5U649 245 aa4.85□□□□□ -1.63
RHOT1-206ENST00000578205 CASC1Q6TDU7 716 aa4.85□□□□□ -1.63
RHOT1-206ENST00000578205 APOBEC3FQ8IUX4 373 aaKnown RBP4.85□□□□□ -1.63
RHOT1-206ENST00000578205 TBC1D10CQ8IV04 446 aa4.85□□□□□ -1.63
RHOT1-206ENST00000578205 CCNJLQ8IV13 435 aa4.85□□□□□ -1.63
RHOT1-206ENST00000578205 CCDC144CPQ8IYA2 1237 aa4.85□□□□□ -1.63
RHOT1-206ENST00000578205 C2orf69Q8N8R5 385 aa4.85□□□□□ -1.63
RHOT1-206ENST00000578205 ACER1Q8TDN7 264 aa4.85□□□□□ -1.63
RHOT1-206ENST00000578205 RUFY2Q8WXA3 655 aa4.85□□□□□ -1.63
RHOT1-206ENST00000578205 MRIQ9BWK5 157 aa4.85□□□□□ -1.63
RHOT1-206ENST00000578205 IDI2Q9BXS1 227 aa4.85□□□□□ -1.63
RHOT1-206ENST00000578205 KRTAP4-2Q9BYR5 136 aa4.85□□□□□ -1.63
RHOT1-206ENST00000578205 LSG1Q9H089 658 aaKnown RBP4.85□□□□□ -1.63
RHOT1-206ENST00000578205 CPVLQ9H3G5 476 aa4.85□□□□□ -1.63
RHOT1-206ENST00000578205 ZFYVE28Q9HCC9 887 aa4.85□□□□□ -1.63
RHOT1-206ENST00000578205 TIAM2Q8IVF5 1701 aa4.85□□□□□ -1.63
RHOT1-206ENST00000578205 HLA-DOAP06340 250 aa4.85□□□□□ -1.63
RHOT1-206ENST00000578205 NF2P35240 595 aa4.85□□□□□ -1.63
RHOT1-206ENST00000578205 STOX1Q6ZVD7 989 aa4.85□□□□□ -1.63
RHOT1-206ENST00000578205 TTC6Q86TZ1 520 aa4.85□□□□□ -1.63
RHOT1-206ENST00000578205 SAPCD2Q86UD0 394 aa4.85□□□□□ -1.63
RHOT1-206ENST00000578205 KSR1Q8IVT5 923 aa4.85□□□□□ -1.63
RHOT1-206ENST00000578205 ZNF444Q8N0Y2 327 aaPredicted RBP4.85□□□□□ -1.63
RHOT1-206ENST00000578205 CCDC74AQ96AQ1 378 aa4.85□□□□□ -1.63
RHOT1-206ENST00000578205 PGAP2Q9UHJ9 254 aa4.85□□□□□ -1.63
RHOT1-206ENST00000578205 PDS5AQ29RF7 1337 aaKnown RBP4.85□□□□□ -1.63
RHOT1-206ENST00000578205 TSPY2A6NKD2 308 aa4.84□□□□□ -1.63
RHOT1-206ENST00000578205 ECEL1O95672 775 aa4.84□□□□□ -1.63
RHOT1-206ENST00000578205 FUT4P22083 530 aa4.84□□□□□ -1.63
RHOT1-206ENST00000578205 SHMT1P34896 483 aa4.84□□□□□ -1.63
RHOT1-206ENST00000578205 GRIA4P48058 902 aa4.84□□□□□ -1.63
RHOT1-206ENST00000578205 SPRED3Q2MJR0 410 aa4.84□□□□□ -1.63
RHOT1-206ENST00000578205 SPOCD1Q6ZMY3 1216 aa4.84□□□□□ -1.63
RHOT1-206ENST00000578205 MFSD6Q6ZSS7 791 aa4.84□□□□□ -1.63
RHOT1-206ENST00000578205 GLIS3Q8NEA6 775 aa4.84□□□□□ -1.63
RHOT1-206ENST00000578205 MAP4K1Q92918 833 aa4.84□□□□□ -1.63
RHOT1-206ENST00000578205 NUP88Q99567 741 aaPredicted RBP4.84□□□□□ -1.63
RHOT1-206ENST00000578205 MYL10Q9BUA6 226 aa4.84□□□□□ -1.63
RHOT1-206ENST00000578205 ATP8A2Q9NTI2 1148 aa4.84□□□□□ -1.63
RHOT1-206ENST00000578205 ZSWIM5Q9P217 1185 aa4.84□□□□□ -1.63
RHOT1-206ENST00000578205 CLIP2Q9UDT6 1046 aa4.84□□□□□ -1.63
RHOT1-206ENST00000578205 HIP1O00291 1037 aa4.84□□□□□ -1.63
RHOT1-206ENST00000578205 ENTPD3O75355 529 aa4.84□□□□□ -1.63
RHOT1-206ENST00000578205 GOLGA8HP0CJ92 632 aa4.84□□□□□ -1.63
RHOT1-206ENST00000578205 HMGCS2P54868 508 aa4.84□□□□□ -1.63
RHOT1-206ENST00000578205 SNAP25P60880 206 aa4.84□□□□□ -1.63
RHOT1-206ENST00000578205 DEFB115Q30KQ5 88 aa4.84□□□□□ -1.63
RHOT1-206ENST00000578205 CREB3L3Q68CJ9 461 aa4.84□□□□□ -1.63
RHOT1-206ENST00000578205 FAM83AQ86UY5 434 aa4.84□□□□□ -1.63
RHOT1-206ENST00000578205 AMOTL1Q8IY63 956 aa4.84□□□□□ -1.63
RHOT1-206ENST00000578205 LRRC47Q8N1G4 583 aaKnown RBP4.84□□□□□ -1.63
RHOT1-206ENST00000578205 PLD6Q8N2A8 252 aaKnown RBP4.84□□□□□ -1.63
RHOT1-206ENST00000578205 NETO1Q8TDF5 533 aa4.84□□□□□ -1.63
RHOT1-206ENST00000578205 TRIM56Q9BRZ2 755 aaKnown RBP4.84□□□□□ -1.63
RHOT1-206ENST00000578205 LIN7BQ9HAP6 207 aa4.84□□□□□ -1.63
RHOT1-206ENST00000578205 CSADQ9Y600 493 aa4.84□□□□□ -1.63
RHOT1-206ENST00000578205 NEDD4P46934 1319 aa4.84□□□□□ -1.64
RHOT1-206ENST00000578205 RANBP2P49792 3224 aaKnown RBP4.84□□□□□ -1.64
RHOT1-206ENST00000578205 hCG_1642624A0A1W2PR95 340 aa4.83□□□□□ -1.64
RHOT1-206ENST00000578205 A0A1W2PRG0 241 aa4.83□□□□□ -1.64
RHOT1-206ENST00000578205 E7EWF7 191 aa4.83□□□□□ -1.64
RHOT1-206ENST00000578205 SLC27A2O14975 620 aa4.83□□□□□ -1.64
RHOT1-206ENST00000578205 PRPF40AO75400 957 aaKnown RBP4.83□□□□□ -1.64
RHOT1-206ENST00000578205 TSPY3P0CV98 308 aa4.83□□□□□ -1.64
RHOT1-206ENST00000578205 TSPY8P0CW00 308 aa4.83□□□□□ -1.64
RHOT1-206ENST00000578205 CD8BP10966 210 aa4.83□□□□□ -1.64
RHOT1-206ENST00000578205 FGD1P98174 961 aa4.83□□□□□ -1.64
RHOT1-206ENST00000578205 IMMTQ16891 758 aaKnown RBP4.83□□□□□ -1.64
RHOT1-206ENST00000578205 ABCB5Q2M3G0 1257 aa4.83□□□□□ -1.64
RHOT1-206ENST00000578205 CYB5R4Q7L1T6 521 aa4.83□□□□□ -1.64
RHOT1-206ENST00000578205 FOXP4Q8IVH2 680 aaPredicted RBP4.83□□□□□ -1.64
RHOT1-206ENST00000578205 TMEM40Q8WWA1 233 aa4.83□□□□□ -1.64
RHOT1-206ENST00000578205 OPTNQ96CV9 577 aa4.83□□□□□ -1.64
RHOT1-206ENST00000578205 JAKMIP1Q96N16 626 aaKnown RBP4.83□□□□□ -1.64
RHOT1-206ENST00000578205 VAT1LQ9HCJ6 419 aa4.83□□□□□ -1.64
RHOT1-206ENST00000578205 KIAA0100Q14667 2235 aaKnown RBP4.83□□□□□ -1.64
RHOT1-206ENST00000578205 A0A1W2PP55 124 aa4.83□□□□□ -1.64
RHOT1-206ENST00000578205 RNASE1P07998 156 aaKnown RBP4.83□□□□□ -1.64
RHOT1-206ENST00000578205 EEF2P13639 858 aaKnown RBP4.83□□□□□ -1.64
RHOT1-206ENST00000578205 GNAT2P19087 354 aa4.83□□□□□ -1.64
RHOT1-206ENST00000578205 MCCP23508 829 aa4.83□□□□□ -1.64
RHOT1-206ENST00000578205 CAP2P40123 477 aa4.83□□□□□ -1.64
RHOT1-206ENST00000578205 STK3Q13188 491 aa4.83□□□□□ -1.64
RHOT1-206ENST00000578205 KIAA1755Q5JYT7 1200 aa4.83□□□□□ -1.64
RHOT1-206ENST00000578205 AKNAD1Q5T1N1 836 aa4.83□□□□□ -1.64
RHOT1-206ENST00000578205 GADL1Q6ZQY3 521 aa4.83□□□□□ -1.64
RHOT1-206ENST00000578205 ARMC9Q7Z3E5 817 aa4.83□□□□□ -1.64
RHOT1-206ENST00000578205 FAM181AQ8N9Y4 354 aa4.83□□□□□ -1.64
RHOT1-206ENST00000578205 NUP133Q8WUM0 1156 aa4.83□□□□□ -1.64
RHOT1-206ENST00000578205 CEP95Q96GE4 821 aa4.83□□□□□ -1.64
RHOT1-206ENST00000578205 TCF12Q99081 682 aa4.83□□□□□ -1.64
RHOT1-206ENST00000578205 SLC38A3Q99624 504 aa4.83□□□□□ -1.64
RHOT1-206ENST00000578205 FEZ1Q99689 392 aa4.83□□□□□ -1.64
RHOT1-206ENST00000578205 ZNF341Q9BYN7 854 aa4.83□□□□□ -1.64
RHOT1-206ENST00000578205 DHX36Q9H2U1 1008 aaKnown RBP4.83□□□□□ -1.64
RHOT1-206ENST00000578205 PICK1Q9NRD5 415 aa4.83□□□□□ -1.64
RHOT1-206ENST00000578205 IL17RBQ9NRM6 502 aa4.83□□□□□ -1.64
RHOT1-206ENST00000578205 MBNL3Q9NUK0 354 aaKnown RBP4.83□□□□□ -1.64
RHOT1-206ENST00000578205 B3GALT4O96024 378 aa4.82□□□□□ -1.64
Retrieved 100 of 20,778 RNA–protein pairs in 30.6 ms