RNA–Protein interactions for RNA: ENST00000578049.3

SEC22B-201, Transcript of SEC22 homolog B, vesicle trafficking protein (gene/pseudogene), humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene SEC22B, Length 6,922 nt, Biotype protein coding, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SEC22B-201ENST00000578049 EEF2KMTQ96G04 330 aa11.53□□□□□ -0.56
SEC22B-201ENST00000578049 NACA2Q9H009 215 aa11.53□□□□□ -0.56
SEC22B-201ENST00000578049 KMT5AQ9NQR1 393 aa11.53□□□□□ -0.56
SEC22B-201ENST00000578049 MRGBPQ9NV56 204 aa11.53□□□□□ -0.56
SEC22B-201ENST00000578049 APOBEC2Q9Y235 224 aaKnown RBP11.53□□□□□ -0.56
SEC22B-201ENST00000578049 USP42Q9H9J4 1324 aaKnown RBP11.53□□□□□ -0.56
SEC22B-201ENST00000578049 LRRIQ4A6NIV6 560 aa11.53□□□□□ -0.56
SEC22B-201ENST00000578049 PROSER3Q2NL68 480 aa11.53□□□□□ -0.56
SEC22B-201ENST00000578049 GRAMD1BQ3KR37 738 aa11.53□□□□□ -0.56
SEC22B-201ENST00000578049 BBS9Q3SYG4 887 aa11.53□□□□□ -0.56
SEC22B-201ENST00000578049 FAM83BQ5T0W9 1011 aa11.53□□□□□ -0.56
SEC22B-201ENST00000578049 KIRREL3Q8IZU9 778 aa11.53□□□□□ -0.56
SEC22B-201ENST00000578049 GIPC2Q8TF65 315 aa11.53□□□□□ -0.56
SEC22B-201ENST00000578049 DHX38Q92620 1227 aaKnown RBP11.53□□□□□ -0.56
SEC22B-201ENST00000578049 VPS39Q96JC1 886 aa11.53□□□□□ -0.56
SEC22B-201ENST00000578049 ZMAT2Q96NC0 199 aaKnown RBP11.53□□□□□ -0.56
SEC22B-201ENST00000578049 ZKSCAN7Q9P0L1 754 aaPredicted RBP11.53□□□□□ -0.56
SEC22B-201ENST00000578049 NOD1Q9Y239 953 aa11.53□□□□□ -0.56
SEC22B-201ENST00000578049 ARHGEF37A1IGU5 675 aa11.53□□□□□ -0.56
SEC22B-201ENST00000578049 ALAS1P13196 640 aa11.53□□□□□ -0.56
SEC22B-201ENST00000578049 TBC1D9BQ66K14 1250 aa11.53□□□□□ -0.56
SEC22B-201ENST00000578049 LARGE2Q8N3Y3 721 aa11.53□□□□□ -0.56
SEC22B-201ENST00000578049 SPATA4Q8NEY3 305 aa11.53□□□□□ -0.56
SEC22B-201ENST00000578049 AP1M1Q9BXS5 423 aa11.53□□□□□ -0.56
SEC22B-201ENST00000578049 KLC2Q9H0B6 622 aa11.53□□□□□ -0.56
SEC22B-201ENST00000578049 ANKARQ7Z5J8 1434 aa11.53□□□□□ -0.56
SEC22B-201ENST00000578049 A0A1B0GTH6 734 aa11.53□□□□□ -0.56
SEC22B-201ENST00000578049 KPNA7A9QM74 516 aa11.53□□□□□ -0.56
SEC22B-201ENST00000578049 CCDC22O60826 627 aa11.53□□□□□ -0.56
SEC22B-201ENST00000578049 LRRN2O75325 713 aa11.53□□□□□ -0.56
SEC22B-201ENST00000578049 AP2B1P63010 937 aa11.53□□□□□ -0.56
SEC22B-201ENST00000578049 ZYXQ15942 572 aaKnown RBP11.53□□□□□ -0.56
SEC22B-201ENST00000578049 EPN3Q9H201 632 aa11.53□□□□□ -0.56
SEC22B-201ENST00000578049 DONSONQ9NYP3 566 aa11.53□□□□□ -0.56
SEC22B-201ENST00000578049 ZFP69BQ9UJL9 534 aa11.53□□□□□ -0.56
SEC22B-201ENST00000578049 GDAQ9Y2T3 454 aa11.53□□□□□ -0.56
SEC22B-201ENST00000578049 WDR17Q8IZU2 1322 aa11.52□□□□□ -0.56
SEC22B-201ENST00000578049 A0A087WWV3 80 aa11.52□□□□□ -0.56
SEC22B-201ENST00000578049 DARS2Q6PI48 645 aaKnown RBP11.52□□□□□ -0.56
SEC22B-201ENST00000578049 RAPH1Q70E73 1250 aa11.52□□□□□ -0.56
SEC22B-201ENST00000578049 RASGRP2Q7LDG7 609 aa11.52□□□□□ -0.56
SEC22B-201ENST00000578049 NUDCD1Q96RS6 583 aa11.52□□□□□ -0.56
SEC22B-201ENST00000578049 HINFPQ9BQA5 517 aa11.52□□□□□ -0.56
SEC22B-201ENST00000578049 SNX12Q9UMY4 172 aa11.52□□□□□ -0.56
SEC22B-201ENST00000578049 SNX24Q9Y343 169 aa11.52□□□□□ -0.56
SEC22B-201ENST00000578049 IGBP1P78318 339 aa11.52□□□□□ -0.56
SEC22B-201ENST00000578049 CCZ1BP86790 482 aa11.52□□□□□ -0.56
SEC22B-201ENST00000578049 CCZ1P86791 482 aaPredicted RBP11.52□□□□□ -0.56
SEC22B-201ENST00000578049 EPM2AIP1Q7L775 607 aaPredicted RBP11.52□□□□□ -0.56
SEC22B-201ENST00000578049 FAM129AQ9BZQ8 928 aa11.52□□□□□ -0.56
SEC22B-201ENST00000578049 GOLPH3LQ9H4A5 285 aa11.52□□□□□ -0.56
SEC22B-201ENST00000578049 CFAP74Q9C0B2 1584 aa11.52□□□□□ -0.57
SEC22B-201ENST00000578049 LRRC53A6NM62 1247 aa11.52□□□□□ -0.57
SEC22B-201ENST00000578049 TLR3O15455 904 aaKnown RBP11.52□□□□□ -0.57
SEC22B-201ENST00000578049 CDR2Q01850 454 aa11.52□□□□□ -0.57
SEC22B-201ENST00000578049 ENOSF1Q7L5Y1 443 aa11.52□□□□□ -0.57
SEC22B-201ENST00000578049 ZC3H18Q86VM9 953 aaKnown RBP11.52□□□□□ -0.57
SEC22B-201ENST00000578049 LCORLQ8N3X6 602 aa11.52□□□□□ -0.57
SEC22B-201ENST00000578049 MMS19Q96T76 1030 aa11.52□□□□□ -0.57
SEC22B-201ENST00000578049 TRIM33Q9UPN9 1127 aa11.52□□□□□ -0.57
SEC22B-201ENST00000578049 TTC26A0AVF1 554 aa11.52□□□□□ -0.57
SEC22B-201ENST00000578049 EIF3HO15372 352 aaKnown RBP eCLIP11.52□□□□□ -0.57
SEC22B-201ENST00000578049 PLS3P13797 630 aa11.52□□□□□ -0.57
SEC22B-201ENST00000578049 INPP1P49441 399 aa11.52□□□□□ -0.57
SEC22B-201ENST00000578049 SNX1Q13596 522 aa11.52□□□□□ -0.57
SEC22B-201ENST00000578049 FAM20AQ96MK3 541 aa11.52□□□□□ -0.57
SEC22B-201ENST00000578049 WNT8AQ9H1J5 351 aa11.52□□□□□ -0.57
SEC22B-201ENST00000578049 CCPG1Q9ULG6 757 aa11.52□□□□□ -0.57
SEC22B-201ENST00000578049 STRIP2Q9ULQ0 834 aa11.52□□□□□ -0.57
SEC22B-201ENST00000578049 PPP1R12AO14974 1030 aaPredicted RBP11.52□□□□□ -0.57
SEC22B-201ENST00000578049 PRPSAP2O60256 369 aa11.52□□□□□ -0.57
SEC22B-201ENST00000578049 MYBL1P10243 752 aa11.52□□□□□ -0.57
SEC22B-201ENST00000578049 PPP2R5CQ13362 524 aa11.52□□□□□ -0.57
SEC22B-201ENST00000578049 STAT4Q14765 748 aa11.52□□□□□ -0.57
SEC22B-201ENST00000578049 DIXDC1Q155Q3 683 aa11.52□□□□□ -0.57
SEC22B-201ENST00000578049 RASGRP4Q8TDF6 673 aa11.52□□□□□ -0.57
SEC22B-201ENST00000578049 RFFLQ8WZ73 363 aa11.52□□□□□ -0.57
SEC22B-201ENST00000578049 ACSL3O95573 720 aa11.51□□□□□ -0.57
SEC22B-201ENST00000578049 PIGSQ96S52 555 aa11.51□□□□□ -0.57
SEC22B-201ENST00000578049 FAM8A1Q9UBU6 413 aa11.51□□□□□ -0.57
SEC22B-201ENST00000578049 TBK1Q9UHD2 729 aa11.51□□□□□ -0.57
SEC22B-201ENST00000578049 TUBE1Q9UJT0 475 aa11.51□□□□□ -0.57
SEC22B-201ENST00000578049 TOM1L1O75674 476 aa11.51□□□□□ -0.57
SEC22B-201ENST00000578049 ZBED1O96006 694 aa11.51□□□□□ -0.57
SEC22B-201ENST00000578049 CHEK2O96017 543 aa11.51□□□□□ -0.57
SEC22B-201ENST00000578049 CALB1P05937 261 aa11.51□□□□□ -0.57
SEC22B-201ENST00000578049 BRAFP15056 766 aa11.51□□□□□ -0.57
SEC22B-201ENST00000578049 MDH1P40925 334 aaKnown RBP11.51□□□□□ -0.57
SEC22B-201ENST00000578049 OCA2Q04671 838 aa11.51□□□□□ -0.57
SEC22B-201ENST00000578049 TCP10Q12799 353 aa11.51□□□□□ -0.57
SEC22B-201ENST00000578049 AGBL2Q5U5Z8 902 aa11.51□□□□□ -0.57
SEC22B-201ENST00000578049 ARL2BPQ9Y2Y0 163 aa11.51□□□□□ -0.57
SEC22B-201ENST00000578049 TMPRSS15P98073 1019 aa11.51□□□□□ -0.57
SEC22B-201ENST00000578049 TAF1BQ53T94 588 aaPredicted RBP11.51□□□□□ -0.57
SEC22B-201ENST00000578049 BEND6Q5SZJ8 279 aaPredicted RBP11.51□□□□□ -0.57
SEC22B-201ENST00000578049 E4F1Q66K89 784 aaPredicted RBP11.51□□□□□ -0.57
SEC22B-201ENST00000578049 TRIM72Q6ZMU5 477 aa11.51□□□□□ -0.57
SEC22B-201ENST00000578049 ARHGAP27Q6ZUM4 889 aa11.51□□□□□ -0.57
SEC22B-201ENST00000578049 FAM160B2Q86V87 743 aa11.51□□□□□ -0.57
SEC22B-201ENST00000578049 AGGF1Q8N302 714 aaeCLIP11.51□□□□□ -0.57
Retrieved 100 of 20,778 RNA–protein pairs in 29.2 ms