RNA–Protein interactions for RNA: ENST00000565634.5

UBFD1-204, Transcript of ubiquitin family domain containing 1, humanhuman

TSL 2

Gene UBFD1, Length 724 nt, Biotype retained intron, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
UBFD1-204ENST00000565634 TMEM221A6NGB7 291 aa7.22□□□□□ -1.25
UBFD1-204ENST00000565634 SOWAHDA6NJG2 315 aa7.22□□□□□ -1.25
UBFD1-204ENST00000565634 M0R296 226 aa7.22□□□□□ -1.25
UBFD1-204ENST00000565634 HIP1O00291 1037 aa7.22□□□□□ -1.25
UBFD1-204ENST00000565634 CDK2AP1O14519 115 aa7.22□□□□□ -1.25
UBFD1-204ENST00000565634 CTAGE5O15320 804 aa7.22□□□□□ -1.25
UBFD1-204ENST00000565634 NMT2O60551 498 aa7.22□□□□□ -1.25
UBFD1-204ENST00000565634 POLR3DP05423 398 aaPredicted RBP7.22□□□□□ -1.25
UBFD1-204ENST00000565634 MAPTP10636 758 aaKnown RBP7.22□□□□□ -1.25
UBFD1-204ENST00000565634 CD33P20138 364 aa7.22□□□□□ -1.25
UBFD1-204ENST00000565634 GUCY1A2P33402 732 aa7.22□□□□□ -1.25
UBFD1-204ENST00000565634 SHMT1P34896 483 aa7.22□□□□□ -1.25
UBFD1-204ENST00000565634 CDK8P49336 464 aa7.22□□□□□ -1.25
UBFD1-204ENST00000565634 ZP2Q05996 745 aa7.22□□□□□ -1.25
UBFD1-204ENST00000565634 ITGA7Q13683 1181 aa7.22□□□□□ -1.25
UBFD1-204ENST00000565634 TMEM132BQ14DG7 1078 aa7.22□□□□□ -1.25
UBFD1-204ENST00000565634 SEPT2Q15019 361 aa7.22□□□□□ -1.25
UBFD1-204ENST00000565634 SBK1Q52WX2 424 aa7.22□□□□□ -1.25
UBFD1-204ENST00000565634 CREB3L3Q68CJ9 461 aa7.22□□□□□ -1.25
UBFD1-204ENST00000565634 NOL8Q76FK4 1167 aaKnown RBP7.22□□□□□ -1.25
UBFD1-204ENST00000565634 CYB5R4Q7L1T6 521 aa7.22□□□□□ -1.25
UBFD1-204ENST00000565634 RPUSD2Q8IZ73 545 aaKnown RBP7.22□□□□□ -1.25
UBFD1-204ENST00000565634 KCNB2Q92953 911 aa7.22□□□□□ -1.25
UBFD1-204ENST00000565634 CHMP4CQ96CF2 233 aa7.22□□□□□ -1.25
UBFD1-204ENST00000565634 C12orf42Q96LP6 360 aa7.22□□□□□ -1.25
UBFD1-204ENST00000565634 TCEANC2Q96MN5 208 aa7.22□□□□□ -1.25
UBFD1-204ENST00000565634 KIF2CQ99661 725 aa7.22□□□□□ -1.25
UBFD1-204ENST00000565634 NOL10Q9BSC4 688 aaKnown RBP7.22□□□□□ -1.25
UBFD1-204ENST00000565634 DSCC1Q9BVC3 393 aa7.22□□□□□ -1.25
UBFD1-204ENST00000565634 FTOQ9C0B1 505 aaKnown RBP eCLIP7.22□□□□□ -1.25
UBFD1-204ENST00000565634 ATP8A2Q9NTI2 1148 aa7.22□□□□□ -1.25
UBFD1-204ENST00000565634 TRMT13Q9NUP7 481 aaKnown RBP7.22□□□□□ -1.25
UBFD1-204ENST00000565634 FAM184BQ9ULE4 1060 aa7.22□□□□□ -1.25
UBFD1-204ENST00000565634 PCDHGA11Q9Y5H2 935 aa7.22□□□□□ -1.25
UBFD1-204ENST00000565634 MYH8P13535 1937 aa7.22□□□□□ -1.25
UBFD1-204ENST00000565634 EP300Q09472 2414 aaPredicted RBP7.22□□□□□ -1.25
UBFD1-204ENST00000565634 MAP1BP46821 2468 aaKnown RBP7.22□□□□□ -1.25
UBFD1-204ENST00000565634 ELP1O95163 1332 aa7.22□□□□□ -1.25
UBFD1-204ENST00000565634 NLRC5Q86WI3 1866 aa7.21□□□□□ -1.25
UBFD1-204ENST00000565634 DCDC2BA2VCK2 349 aa7.21□□□□□ -1.26
UBFD1-204ENST00000565634 C1QTNF9BB2RNN3 333 aa7.21□□□□□ -1.26
UBFD1-204ENST00000565634 GNB5O14775 395 aa7.21□□□□□ -1.26
UBFD1-204ENST00000565634 AKR1B1P15121 316 aa7.21□□□□□ -1.26
UBFD1-204ENST00000565634 RASA1P20936 1047 aa7.21□□□□□ -1.26
UBFD1-204ENST00000565634 TDO2P48775 406 aa7.21□□□□□ -1.26
UBFD1-204ENST00000565634 PPARAQ07869 468 aa7.21□□□□□ -1.26
UBFD1-204ENST00000565634 CCDC144BQ3MJ40 725 aa7.21□□□□□ -1.26
UBFD1-204ENST00000565634 CD163Q86VB7 1156 aa7.21□□□□□ -1.26
UBFD1-204ENST00000565634 METTL16Q86W50 562 aaKnown RBP7.21□□□□□ -1.26
UBFD1-204ENST00000565634 FCHSD1Q86WN1 690 aa7.21□□□□□ -1.26
UBFD1-204ENST00000565634 TICAM2Q86XR7 235 aa7.21□□□□□ -1.26
UBFD1-204ENST00000565634 HERC6Q8IVU3 1022 aa7.21□□□□□ -1.26
UBFD1-204ENST00000565634 SHCBP1Q8NEM2 672 aa7.21□□□□□ -1.26
UBFD1-204ENST00000565634 RUFY2Q8WXA3 655 aa7.21□□□□□ -1.26
UBFD1-204ENST00000565634 ZKSCAN3Q9BRR0 538 aa7.21□□□□□ -1.26
UBFD1-204ENST00000565634 LRRC2Q9BYS8 371 aa7.21□□□□□ -1.26
UBFD1-204ENST00000565634 NAPBQ9H115 298 aa7.21□□□□□ -1.26
UBFD1-204ENST00000565634 FBXO28Q9NVF7 368 aa7.21□□□□□ -1.26
UBFD1-204ENST00000565634 HOXC10Q9NYD6 342 aa7.21□□□□□ -1.26
UBFD1-204ENST00000565634 CNPY2Q9Y2B0 182 aa7.21□□□□□ -1.26
UBFD1-204ENST00000565634 DDX52Q9Y2R4 599 aaKnown RBP eCLIP7.21□□□□□ -1.26
UBFD1-204ENST00000565634 SNX14Q9Y5W7 946 aa7.21□□□□□ -1.26
UBFD1-204ENST00000565634 VPS13AQ96RL7 3174 aa7.21□□□□□ -1.26
UBFD1-204ENST00000565634 MROH7Q68CQ1 1323 aa7.21□□□□□ -1.26
UBFD1-204ENST00000565634 EPG5Q9HCE0 2579 aa7.2□□□□□ -1.26
UBFD1-204ENST00000565634 A6NJY4 79 aa7.2□□□□□ -1.26
UBFD1-204ENST00000565634 KIF28PB7ZC32 967 aa7.2□□□□□ -1.26
UBFD1-204ENST00000565634 E7EWF7 191 aa7.2□□□□□ -1.26
UBFD1-204ENST00000565634 MPHOSPH10O00566 681 aaKnown RBP7.2□□□□□ -1.26
UBFD1-204ENST00000565634 DUSP11O75319 330 aaKnown RBP7.2□□□□□ -1.26
UBFD1-204ENST00000565634 FLOT1O75955 427 aa7.2□□□□□ -1.26
UBFD1-204ENST00000565634 PDGFBP01127 241 aaPredicted RBP7.2□□□□□ -1.26
UBFD1-204ENST00000565634 FGRP09769 529 aa7.2□□□□□ -1.26
UBFD1-204ENST00000565634 ARP10275 920 aa7.2□□□□□ -1.26
UBFD1-204ENST00000565634 GNAT2P19087 354 aa7.2□□□□□ -1.26
UBFD1-204ENST00000565634 HSPA4P34932 840 aa7.2□□□□□ -1.26
UBFD1-204ENST00000565634 ANTXR2P58335 489 aa7.2□□□□□ -1.26
UBFD1-204ENST00000565634 DEFB103AP81534 67 aa7.2□□□□□ -1.26
UBFD1-204ENST00000565634 DLX2Q07687 328 aaPredicted RBP7.2□□□□□ -1.26
UBFD1-204ENST00000565634 ABCB5Q2M3G0 1257 aa7.2□□□□□ -1.26
UBFD1-204ENST00000565634 TCTN1Q2MV58 587 aa7.2□□□□□ -1.26
UBFD1-204ENST00000565634 LRRFIP1Q32MZ4 808 aaKnown RBP7.2□□□□□ -1.26
UBFD1-204ENST00000565634 CERKLQ49MI3 558 aaPredicted RBP7.2□□□□□ -1.26
UBFD1-204ENST00000565634 ARSJQ5FYB0 599 aaPredicted RBP7.2□□□□□ -1.26
UBFD1-204ENST00000565634 GIMAP6Q6P9H5 292 aa7.2□□□□□ -1.26
UBFD1-204ENST00000565634 KIAA1211Q6ZU35 1233 aa7.2□□□□□ -1.26
UBFD1-204ENST00000565634 C16orf86Q6ZW13 317 aa7.2□□□□□ -1.26
UBFD1-204ENST00000565634 CHSY3Q70JA7 882 aa7.2□□□□□ -1.26
UBFD1-204ENST00000565634 PCSK9Q8NBP7 692 aaKnown RBP7.2□□□□□ -1.26
UBFD1-204ENST00000565634 CLP1Q92989 425 aaKnown RBP7.2□□□□□ -1.26
UBFD1-204ENST00000565634 MRRFQ96E11 262 aaKnown RBP7.2□□□□□ -1.26
UBFD1-204ENST00000565634 C17orf80Q9BSJ5 609 aa7.2□□□□□ -1.26
UBFD1-204ENST00000565634 KIAA1683Q9H0B3 1180 aa7.2□□□□□ -1.26
UBFD1-204ENST00000565634 MROH8Q9H579 483 aa7.2□□□□□ -1.26
UBFD1-204ENST00000565634 IL17RBQ9NRM6 502 aa7.2□□□□□ -1.26
UBFD1-204ENST00000565634 ZSWIM5Q9P217 1185 aa7.2□□□□□ -1.26
UBFD1-204ENST00000565634 ANAPC4Q9UJX5 808 aa7.2□□□□□ -1.26
UBFD1-204ENST00000565634 ASTN1O14525 1302 aa7.2□□□□□ -1.26
UBFD1-204ENST00000565634 NEDD4P46934 1319 aa7.2□□□□□ -1.26
UBFD1-204ENST00000565634 B4E1Z4 1266 aa7.19□□□□□ -1.26
Retrieved 100 of 20,778 RNA–protein pairs in 28.2 ms