RNA–Protein interactions for RNA: ENST00000561359.1

HERC1-213, Transcript of HECT and RLD domain containing E3 ubiquitin protein ligase family member 1, humanhuman

TSL 3

Gene HERC1, Length 551 nt, Biotype nonsense mediated decay, Subcellular localisation Cytoplasm, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
HERC1-213ENST00000561359 PDE4BQ07343 736 aa6.33□□□□□ -1.4
HERC1-213ENST00000561359 KLRC3Q07444 240 aa6.33□□□□□ -1.4
HERC1-213ENST00000561359 RBL2Q08999 1139 aa6.33□□□□□ -1.4
HERC1-213ENST00000561359 DMWDQ09019 674 aa6.33□□□□□ -1.4
HERC1-213ENST00000561359 MBTPS1Q14703 1052 aa6.33□□□□□ -1.4
HERC1-213ENST00000561359 DBN1Q16643 649 aa6.33□□□□□ -1.4
HERC1-213ENST00000561359 NSMFQ6X4W1 530 aa6.33□□□□□ -1.4
HERC1-213ENST00000561359 RBM23Q86U06 439 aaKnown RBP6.33□□□□□ -1.4
HERC1-213ENST00000561359 AMOTL1Q8IY63 956 aa6.33□□□□□ -1.4
HERC1-213ENST00000561359 SVOPQ8N4V2 548 aa6.33□□□□□ -1.4
HERC1-213ENST00000561359 DCLK2Q8N568 766 aa6.33□□□□□ -1.4
HERC1-213ENST00000561359 COPS5Q92905 334 aa6.33□□□□□ -1.4
HERC1-213ENST00000561359 GTPBP3Q969Y2 492 aaKnown RBP6.33□□□□□ -1.4
HERC1-213ENST00000561359 TRERF1Q96PN7 1200 aa6.33□□□□□ -1.4
HERC1-213ENST00000561359 ALG2Q9H553 416 aa6.33□□□□□ -1.4
HERC1-213ENST00000561359 SERTAD1Q9UHV2 236 aa6.33□□□□□ -1.4
HERC1-213ENST00000561359 FEM1BQ9UK73 627 aa6.33□□□□□ -1.4
HERC1-213ENST00000561359 SORCS3Q9UPU3 1222 aa6.33□□□□□ -1.4
HERC1-213ENST00000561359 RWDD3Q9Y3V2 267 aa6.33□□□□□ -1.4
HERC1-213ENST00000561359 R4GN57 208 aa6.33□□□□□ -1.4
HERC1-213ENST00000561359 SCN10AQ9Y5Y9 1956 aa6.33□□□□□ -1.4
HERC1-213ENST00000561359 CYP2D7A0A087X1C5 515 aa6.32□□□□□ -1.4
HERC1-213ENST00000561359 POM121CA8CG34 1229 aa6.32□□□□□ -1.4
HERC1-213ENST00000561359 RSPH10B2B2RC85 870 aa6.32□□□□□ -1.4
HERC1-213ENST00000561359 NKRFO15226 690 aaKnown RBP eCLIP6.32□□□□□ -1.4
HERC1-213ENST00000561359 MMP1P03956 469 aa6.32□□□□□ -1.4
HERC1-213ENST00000561359 RSPH10BP0C881 870 aa6.32□□□□□ -1.4
HERC1-213ENST00000561359 ATXN1P54253 815 aaKnown RBP6.32□□□□□ -1.4
HERC1-213ENST00000561359 IKQ13123 557 aaPredicted RBP6.32□□□□□ -1.4
HERC1-213ENST00000561359 PTK7Q13308 1070 aa6.32□□□□□ -1.4
HERC1-213ENST00000561359 OS9Q13438 667 aaPredicted RBP6.32□□□□□ -1.4
HERC1-213ENST00000561359 COL9A3Q14050 684 aaPredicted RBP6.32□□□□□ -1.4
HERC1-213ENST00000561359 TKFCQ3LXA3 575 aa6.32□□□□□ -1.4
HERC1-213ENST00000561359 TNNI3KQ59H18 835 aa6.32□□□□□ -1.4
HERC1-213ENST00000561359 TMED8Q6PL24 325 aaPredicted RBP6.32□□□□□ -1.4
HERC1-213ENST00000561359 ADGRD2Q7Z7M1 963 aa6.32□□□□□ -1.4
HERC1-213ENST00000561359 SESTD1Q86VW0 696 aa6.32□□□□□ -1.4
HERC1-213ENST00000561359 CCDC105Q8IYK2 499 aa6.32□□□□□ -1.4
HERC1-213ENST00000561359 LRRC47Q8N1G4 583 aaKnown RBP6.32□□□□□ -1.4
HERC1-213ENST00000561359 PGBD3Q8N328 593 aa6.32□□□□□ -1.4
HERC1-213ENST00000561359 C7orf31Q8N865 590 aa6.32□□□□□ -1.4
HERC1-213ENST00000561359 DTWD2Q8NBA8 298 aa6.32□□□□□ -1.4
HERC1-213ENST00000561359 SSH1Q8WYL5 1049 aa6.32□□□□□ -1.4
HERC1-213ENST00000561359 SUSD6Q92537 303 aa6.32□□□□□ -1.4
HERC1-213ENST00000561359 SEPT8Q92599 483 aa6.32□□□□□ -1.4
HERC1-213ENST00000561359 MEIS3Q99687 375 aa6.32□□□□□ -1.4
HERC1-213ENST00000561359 NUCKS1Q9H1E3 243 aaKnown RBP6.32□□□□□ -1.4
HERC1-213ENST00000561359 TLE6Q9H808 572 aa6.32□□□□□ -1.4
HERC1-213ENST00000561359 PRKRIP1Q9H875 184 aaPredicted RBP6.32□□□□□ -1.4
HERC1-213ENST00000561359 CYP39A1Q9NYL5 469 aa6.32□□□□□ -1.4
HERC1-213ENST00000561359 HDAC6Q9UBN7 1215 aa6.32□□□□□ -1.4
HERC1-213ENST00000561359 FPGT-TNNI3KV9GXZ4 949 aa6.32□□□□□ -1.4
HERC1-213ENST00000561359 PARP14Q460N5 1801 aa6.32□□□□□ -1.4
HERC1-213ENST00000561359 A0A1B0GTH6 734 aa6.31□□□□□ -1.4
HERC1-213ENST00000561359 RBM47A0AV96 593 aaKnown RBP6.31□□□□□ -1.4
HERC1-213ENST00000561359 DCDC2BA2VCK2 349 aa6.31□□□□□ -1.4
HERC1-213ENST00000561359 PI15O43692 258 aa6.31□□□□□ -1.4
HERC1-213ENST00000561359 GLP2RO95838 553 aa6.31□□□□□ -1.4
HERC1-213ENST00000561359 TXNP10599 105 aaKnown RBP6.31□□□□□ -1.4
HERC1-213ENST00000561359 THPOP40225 353 aa6.31□□□□□ -1.4
HERC1-213ENST00000561359 ALDH5A1P51649 535 aaPredicted RBP6.31□□□□□ -1.4
HERC1-213ENST00000561359 CAMK1Q14012 370 aa6.31□□□□□ -1.4
HERC1-213ENST00000561359 C4orf17Q53FE4 359 aa6.31□□□□□ -1.4
HERC1-213ENST00000561359 PLEKHG4Q58EX7 1191 aa6.31□□□□□ -1.4
HERC1-213ENST00000561359 MUM1L1Q5H9M0 696 aa6.31□□□□□ -1.4
HERC1-213ENST00000561359 SLC9C2Q5TAH2 1124 aa6.31□□□□□ -1.4
HERC1-213ENST00000561359 ZC3H14Q6PJT7 736 aaKnown RBP6.31□□□□□ -1.4
HERC1-213ENST00000561359 C16orf86Q6ZW13 317 aa6.31□□□□□ -1.4
HERC1-213ENST00000561359 DEPDC4Q8N2C3 294 aa6.31□□□□□ -1.4
HERC1-213ENST00000561359 MORC4Q8TE76 937 aa6.31□□□□□ -1.4
HERC1-213ENST00000561359 RHBDD1Q8TEB9 315 aa6.31□□□□□ -1.4
HERC1-213ENST00000561359 SCFD2Q8WU76 684 aa6.31□□□□□ -1.4
HERC1-213ENST00000561359 AFG1LQ8WV93 481 aa6.31□□□□□ -1.4
HERC1-213ENST00000561359 WNT8BQ93098 351 aa6.31□□□□□ -1.4
HERC1-213ENST00000561359 CLUAP1Q96AJ1 413 aa6.31□□□□□ -1.4
HERC1-213ENST00000561359 ZNF512BQ96KM6 892 aaPredicted RBP6.31□□□□□ -1.4
HERC1-213ENST00000561359 NEK1Q96PY6 1258 aa6.31□□□□□ -1.4
HERC1-213ENST00000561359 ALG1Q9BT22 464 aa6.31□□□□□ -1.4
HERC1-213ENST00000561359 APOL5Q9BWW9 433 aa6.31□□□□□ -1.4
HERC1-213ENST00000561359 PLVAPQ9BX97 442 aa6.31□□□□□ -1.4
HERC1-213ENST00000561359 SMOC2Q9H3U7 446 aa6.31□□□□□ -1.4
HERC1-213ENST00000561359 ANTXR1Q9H6X2 564 aa6.31□□□□□ -1.4
HERC1-213ENST00000561359 NYAP2Q9P242 653 aa6.31□□□□□ -1.4
HERC1-213ENST00000561359 CLIP2Q9UDT6 1046 aa6.31□□□□□ -1.4
HERC1-213ENST00000561359 ADD3Q9UEY8 706 aaKnown RBP6.31□□□□□ -1.4
HERC1-213ENST00000561359 GTF2IRD1Q9UHL9 959 aa6.31□□□□□ -1.4
HERC1-213ENST00000561359 PLAGL2Q9UPG8 496 aa6.31□□□□□ -1.4
HERC1-213ENST00000561359 NR2E1Q9Y466 385 aa6.31□□□□□ -1.4
HERC1-213ENST00000561359 HRH3Q9Y5N1 445 aa6.31□□□□□ -1.4
HERC1-213ENST00000561359 MICAL3Q7RTP6 2002 aa6.31□□□□□ -1.4
HERC1-213ENST00000561359 LOC101059915A0A1B0GWI6 518 aaPredicted RBP6.3□□□□□ -1.4
HERC1-213ENST00000561359 TMEM232C9JQI7 657 aa6.3□□□□□ -1.4
HERC1-213ENST00000561359 PER2O15055 1255 aa6.3□□□□□ -1.4
HERC1-213ENST00000561359 LZTS3O60299 673 aaPredicted RBP6.3□□□□□ -1.4
HERC1-213ENST00000561359 ASGR2P07307 311 aa6.3□□□□□ -1.4
HERC1-213ENST00000561359 ADRB1P08588 477 aa6.3□□□□□ -1.4
HERC1-213ENST00000561359 GNAI3P08754 354 aa6.3□□□□□ -1.4
HERC1-213ENST00000561359 LINC00271P0C7V0 271 aa6.3□□□□□ -1.4
HERC1-213ENST00000561359 PDE6AP16499 860 aa6.3□□□□□ -1.4
HERC1-213ENST00000561359 AOC1P19801 751 aa6.3□□□□□ -1.4
Retrieved 100 of 20,778 RNA–protein pairs in 63.4 ms