RNA–Protein interactions for RNA: ENST00000558264.5

TPM1-210, Transcript of tropomyosin 1, humanhuman

TSL 2

Gene TPM1, Length 2,687 nt, Biotype nonsense mediated decay, Subcellular localisation Cytosol, Nucleus, Ribosome .

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TPM1-210ENST00000558264 PCDHA13Q9Y5I0 950 aa11.63□□□□□ -0.55
TPM1-210ENST00000558264 CAPN6Q9Y6Q1 641 aa11.63□□□□□ -0.55
TPM1-210ENST00000558264 SORBS3O60504 671 aa11.63□□□□□ -0.55
TPM1-210ENST00000558264 KIF20AO95235 890 aa11.63□□□□□ -0.55
TPM1-210ENST00000558264 MOCS3O95396 460 aa11.63□□□□□ -0.55
TPM1-210ENST00000558264 NR3C1P04150 777 aa11.63□□□□□ -0.55
TPM1-210ENST00000558264 AMPD2Q01433 879 aa11.63□□□□□ -0.55
TPM1-210ENST00000558264 KIF5AQ12840 1032 aa11.63□□□□□ -0.55
TPM1-210ENST00000558264 C1orf186Q6ZWK4 172 aa11.63□□□□□ -0.55
TPM1-210ENST00000558264 FAM133AQ8N9E0 248 aa11.63□□□□□ -0.55
TPM1-210ENST00000558264 TAAR1Q96RJ0 339 aa11.63□□□□□ -0.55
TPM1-210ENST00000558264 MXRA8Q9BRK3 442 aa11.63□□□□□ -0.55
TPM1-210ENST00000558264 TEKT3Q9BXF9 490 aa11.63□□□□□ -0.55
TPM1-210ENST00000558264 ZNF541Q9H0D2 1346 aa11.62□□□□□ -0.55
TPM1-210ENST00000558264 HSD17B4P51659 736 aa11.62□□□□□ -0.55
TPM1-210ENST00000558264 VAV2P52735 878 aa11.62□□□□□ -0.55
TPM1-210ENST00000558264 TRAF1Q13077 416 aa11.62□□□□□ -0.55
TPM1-210ENST00000558264 TMCO3Q6UWJ1 677 aa11.62□□□□□ -0.55
TPM1-210ENST00000558264 PIAS4Q8N2W9 510 aaPredicted RBP11.62□□□□□ -0.55
TPM1-210ENST00000558264 ATG4CQ96DT6 458 aa11.62□□□□□ -0.55
TPM1-210ENST00000558264 PNKPQ96T60 521 aa11.62□□□□□ -0.55
TPM1-210ENST00000558264 EHMT1Q9H9B1 1298 aa11.62□□□□□ -0.55
TPM1-210ENST00000558264 OGFRQ9NZT2 677 aa11.62□□□□□ -0.55
TPM1-210ENST00000558264 ARMCX3Q9UH62 379 aaPredicted RBP11.62□□□□□ -0.55
TPM1-210ENST00000558264 CTDP1Q9Y5B0 961 aaPredicted RBP11.62□□□□□ -0.55
TPM1-210ENST00000558264 KIF13BQ9NQT8 1826 aa11.62□□□□□ -0.55
TPM1-210ENST00000558264 WDR46O15213 610 aaKnown RBP11.62□□□□□ -0.55
TPM1-210ENST00000558264 TGFB1I1O43294 461 aa11.62□□□□□ -0.55
TPM1-210ENST00000558264 BUB1O43683 1085 aa11.62□□□□□ -0.55
TPM1-210ENST00000558264 PNMA6AP0CW24 399 aaPredicted RBP11.62□□□□□ -0.55
TPM1-210ENST00000558264 ZNF280AP59817 542 aaPredicted RBP11.62□□□□□ -0.55
TPM1-210ENST00000558264 RPS6P62753 249 aaKnown RBP11.62□□□□□ -0.55
TPM1-210ENST00000558264 MRPS9P82933 396 aaKnown RBP11.62□□□□□ -0.55
TPM1-210ENST00000558264 MAP3K10Q02779 954 aa11.62□□□□□ -0.55
TPM1-210ENST00000558264 ITGB3BPQ13352 177 aaPredicted RBP11.62□□□□□ -0.55
TPM1-210ENST00000558264 TNFAIP1Q13829 316 aa11.62□□□□□ -0.55
TPM1-210ENST00000558264 EDRF1Q3B7T1 1238 aa11.62□□□□□ -0.55
TPM1-210ENST00000558264 ANGEL2Q5VTE6 544 aaKnown RBP11.62□□□□□ -0.55
TPM1-210ENST00000558264 HGSNATQ68CP4 663 aa11.62□□□□□ -0.55
TPM1-210ENST00000558264 GJB7Q6PEY0 223 aa11.62□□□□□ -0.55
TPM1-210ENST00000558264 GPR161Q8N6U8 529 aaKnown RBP11.62□□□□□ -0.55
TPM1-210ENST00000558264 HINFPQ9BQA5 517 aa11.62□□□□□ -0.55
TPM1-210ENST00000558264 HNRNPUL1Q9BUJ2 856 aaKnown RBP eCLIP11.62□□□□□ -0.55
TPM1-210ENST00000558264 VPS33BQ9H267 617 aa11.62□□□□□ -0.55
TPM1-210ENST00000558264 TUFT1Q9NNX1 390 aa11.62□□□□□ -0.55
TPM1-210ENST00000558264 JADE2Q9NQC1 790 aa11.62□□□□□ -0.55
TPM1-210ENST00000558264 ARGLU1Q9NWB6 273 aaPredicted RBP11.62□□□□□ -0.55
TPM1-210ENST00000558264 SALL4Q9UJQ4 1053 aa11.62□□□□□ -0.55
TPM1-210ENST00000558264 RIPK3Q9Y572 518 aa11.62□□□□□ -0.55
TPM1-210ENST00000558264 TISP43B9A030 160 aa11.61□□□□□ -0.55
TPM1-210ENST00000558264 DNA2P51530 1060 aa11.61□□□□□ -0.55
TPM1-210ENST00000558264 CYP2J2P51589 502 aa11.61□□□□□ -0.55
TPM1-210ENST00000558264 ODR4Q5SWX8 454 aa11.61□□□□□ -0.55
TPM1-210ENST00000558264 SFMBT2Q5VUG0 894 aa11.61□□□□□ -0.55
TPM1-210ENST00000558264 MIER3Q7Z3K6 550 aa11.61□□□□□ -0.55
TPM1-210ENST00000558264 CEP112Q8N8E3 955 aa11.61□□□□□ -0.55
TPM1-210ENST00000558264 RDH13Q8NBN7 331 aa11.61□□□□□ -0.55
TPM1-210ENST00000558264 NLGN2Q8NFZ4 835 aa11.61□□□□□ -0.55
TPM1-210ENST00000558264 SYTL5Q8TDW5 730 aaPredicted RBP11.61□□□□□ -0.55
TPM1-210ENST00000558264 RABGGTAQ92696 567 aa11.61□□□□□ -0.55
TPM1-210ENST00000558264 SECISBP2LQ93073 1101 aaKnown RBP11.61□□□□□ -0.55
TPM1-210ENST00000558264 WRNIP1Q96S55 665 aa11.61□□□□□ -0.55
TPM1-210ENST00000558264 MMS19Q96T76 1030 aa11.61□□□□□ -0.55
TPM1-210ENST00000558264 ANKZF1Q9H8Y5 726 aa11.61□□□□□ -0.55
TPM1-210ENST00000558264 CEP72Q9P209 647 aa11.61□□□□□ -0.55
TPM1-210ENST00000558264 MYO1AQ9UBC5 1043 aa11.61□□□□□ -0.55
TPM1-210ENST00000558264 TRAF3IP3Q9Y228 551 aa11.61□□□□□ -0.55
TPM1-210ENST00000558264 FHOD1Q9Y613 1164 aa11.61□□□□□ -0.55
TPM1-210ENST00000558264 ZMYM2Q9UBW7 1377 aa11.61□□□□□ -0.55
TPM1-210ENST00000558264 ATAD5Q96QE3 1844 aa11.61□□□□□ -0.55
TPM1-210ENST00000558264 CTAGE15A4D2H0 777 aa11.61□□□□□ -0.55
TPM1-210ENST00000558264 ARHGEF35A5YM69 484 aa11.61□□□□□ -0.55
TPM1-210ENST00000558264 CALUO43852 315 aaPredicted RBP11.61□□□□□ -0.55
TPM1-210ENST00000558264 PLA2G6O60733 806 aa11.61□□□□□ -0.55
TPM1-210ENST00000558264 GNA14O95837 355 aa11.61□□□□□ -0.55
TPM1-210ENST00000558264 CTAGE8P0CG41 777 aa11.61□□□□□ -0.55
TPM1-210ENST00000558264 HNRNPH3P31942 346 aaKnown RBP11.61□□□□□ -0.55
TPM1-210ENST00000558264 CXCR5P32302 372 aa11.61□□□□□ -0.55
TPM1-210ENST00000558264 UTP14CQ5TAP6 766 aaKnown RBP11.61□□□□□ -0.55
TPM1-210ENST00000558264 CTAGE6Q86UF2 777 aa11.61□□□□□ -0.55
TPM1-210ENST00000558264 CTAGE4Q8IX94 777 aa11.61□□□□□ -0.55
TPM1-210ENST00000558264 TRPM4Q8TD43 1214 aa11.61□□□□□ -0.55
TPM1-210ENST00000558264 KIAA1683Q9H0B3 1180 aa11.61□□□□□ -0.55
TPM1-210ENST00000558264 PARVGQ9HBI0 331 aa11.61□□□□□ -0.55
TPM1-210ENST00000558264 SLC38A10Q9HBR0 1119 aa11.61□□□□□ -0.55
TPM1-210ENST00000558264 TYW1Q9NV66 732 aaKnown RBP11.61□□□□□ -0.55
TPM1-210ENST00000558264 AJAP1Q9UKB5 411 aaPredicted RBP11.61□□□□□ -0.55
TPM1-210ENST00000558264 FER1L6Q2WGJ9 1857 aa11.6□□□□□ -0.55
TPM1-210ENST00000558264 TESPA1A2RU30 521 aaPredicted RBP11.6□□□□□ -0.55
TPM1-210ENST00000558264 SLC26A4O43511 780 aa11.6□□□□□ -0.55
TPM1-210ENST00000558264 NCK2O43639 380 aa11.6□□□□□ -0.55
TPM1-210ENST00000558264 PEX10O60683 326 aa11.6□□□□□ -0.55
TPM1-210ENST00000558264 ATP9AO75110 1047 aa11.6□□□□□ -0.55
TPM1-210ENST00000558264 HIP1RO75146 1068 aa11.6□□□□□ -0.55
TPM1-210ENST00000558264 SASH3O75995 380 aa11.6□□□□□ -0.55
TPM1-210ENST00000558264 XRCC5P13010 732 aaKnown RBP11.6□□□□□ -0.55
TPM1-210ENST00000558264 MAGEA1P43355 309 aa11.6□□□□□ -0.55
TPM1-210ENST00000558264 HMGCS2P54868 508 aa11.6□□□□□ -0.55
TPM1-210ENST00000558264 NAP1L1P55209 391 aaKnown RBP11.6□□□□□ -0.55
TPM1-210ENST00000558264 CDK17Q00537 523 aa11.6□□□□□ -0.55
Retrieved 100 of 20,778 RNA–protein pairs in 37.1 ms