RNA–Protein interactions for RNA: ENST00000554636.1

VTI1B-203, Transcript of vesicle transport through interaction with t-SNAREs 1B, humanhuman

TSL 3

Gene VTI1B, Length 565 nt, Biotype protein coding, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
VTI1B-203ENST00000554636 ZNF445P59923 1031 aa5.31□□□□□ -1.56
VTI1B-203ENST00000554636 GRAPQ13588 217 aa5.31□□□□□ -1.56
VTI1B-203ENST00000554636 TWISTNBQ3B726 338 aaPredicted RBP5.31□□□□□ -1.56
VTI1B-203ENST00000554636 CCDC30Q5VVM6 783 aa5.31□□□□□ -1.56
VTI1B-203ENST00000554636 ATG14Q6ZNE5 492 aa5.31□□□□□ -1.56
VTI1B-203ENST00000554636 WDR63Q8IWG1 891 aa5.31□□□□□ -1.56
VTI1B-203ENST00000554636 RTKN2Q8IZC4 609 aa5.31□□□□□ -1.56
VTI1B-203ENST00000554636 FIBCD1Q8N539 461 aa5.31□□□□□ -1.56
VTI1B-203ENST00000554636 NAT16Q8N8M0 369 aa5.31□□□□□ -1.56
VTI1B-203ENST00000554636 RBBP8NLQ8NC74 664 aaPredicted RBP5.31□□□□□ -1.56
VTI1B-203ENST00000554636 ADCY4Q8NFM4 1077 aa5.31□□□□□ -1.56
VTI1B-203ENST00000554636 GRAPLQ8TC17 118 aaPredicted RBP5.31□□□□□ -1.56
VTI1B-203ENST00000554636 SHISA4Q96DD7 197 aa5.31□□□□□ -1.56
VTI1B-203ENST00000554636 RBM17Q96I25 401 aaKnown RBP5.31□□□□□ -1.56
VTI1B-203ENST00000554636 FCRL2Q96LA5 508 aaPredicted RBP5.31□□□□□ -1.56
VTI1B-203ENST00000554636 ZDHHC15Q96MV8 337 aa5.31□□□□□ -1.56
VTI1B-203ENST00000554636 KRTAP9-9Q9BYP9 154 aa5.31□□□□□ -1.56
VTI1B-203ENST00000554636 KRTAP9-4Q9BYQ2 154 aa5.31□□□□□ -1.56
VTI1B-203ENST00000554636 NOL6Q9H6R4 1146 aaKnown RBP5.31□□□□□ -1.56
VTI1B-203ENST00000554636 CCSER2Q9H7U1 834 aa5.31□□□□□ -1.56
VTI1B-203ENST00000554636 GP6Q9HCN6 339 aa5.31□□□□□ -1.56
VTI1B-203ENST00000554636 TRMT112Q9UI30 125 aaKnown RBP5.31□□□□□ -1.56
VTI1B-203ENST00000554636 INPP5FQ9Y2H2 1132 aa5.31□□□□□ -1.56
VTI1B-203ENST00000554636 ZNF451Q9Y4E5 1061 aa5.31□□□□□ -1.56
VTI1B-203ENST00000554636 TAF6LQ9Y6J9 622 aa5.31□□□□□ -1.56
VTI1B-203ENST00000554636 SCN4AP35499 1836 aa5.31□□□□□ -1.56
VTI1B-203ENST00000554636 ADAMTSL1Q8N6G6 1762 aa5.31□□□□□ -1.56
VTI1B-203ENST00000554636 NPIPB6E9PJ23 425 aa5.3□□□□□ -1.56
VTI1B-203ENST00000554636 IRS4O14654 1257 aaPredicted RBP5.3□□□□□ -1.56
VTI1B-203ENST00000554636 TCERG1O14776 1098 aaKnown RBP5.3□□□□□ -1.56
VTI1B-203ENST00000554636 NRDCO43847 1150 aa5.3□□□□□ -1.56
VTI1B-203ENST00000554636 DDNO94850 711 aaPredicted RBP5.3□□□□□ -1.56
VTI1B-203ENST00000554636 IGKV5-2P06315 115 aa5.3□□□□□ -1.56
VTI1B-203ENST00000554636 GSNP06396 782 aa5.3□□□□□ -1.56
VTI1B-203ENST00000554636 FSTL1Q12841 308 aa5.3□□□□□ -1.56
VTI1B-203ENST00000554636 COL9A2Q14055 689 aaPredicted RBP5.3□□□□□ -1.56
VTI1B-203ENST00000554636 PPP2R5DQ14738 602 aa5.3□□□□□ -1.56
VTI1B-203ENST00000554636 SF3B3Q15393 1217 aaKnown RBP5.3□□□□□ -1.56
VTI1B-203ENST00000554636 GNPTABQ3T906 1256 aa5.3□□□□□ -1.56
VTI1B-203ENST00000554636 G2E3Q7L622 706 aa5.3□□□□□ -1.56
VTI1B-203ENST00000554636 NLRX1Q86UT6 975 aa5.3□□□□□ -1.56
VTI1B-203ENST00000554636 IRF2BP1Q8IU81 584 aa5.3□□□□□ -1.56
VTI1B-203ENST00000554636 C16orf71Q8IYS4 520 aaPredicted RBP5.3□□□□□ -1.56
VTI1B-203ENST00000554636 FAM9BQ8IZU0 186 aa5.3□□□□□ -1.56
VTI1B-203ENST00000554636 ZBTB38Q8NAP3 1195 aaPredicted RBP5.3□□□□□ -1.56
VTI1B-203ENST00000554636 RASGRP4Q8TDF6 673 aa5.3□□□□□ -1.56
VTI1B-203ENST00000554636 KCNN1Q92952 543 aa5.3□□□□□ -1.56
VTI1B-203ENST00000554636 FAM89AQ96GI7 184 aa5.3□□□□□ -1.56
VTI1B-203ENST00000554636 MYD88Q99836 296 aa5.3□□□□□ -1.56
VTI1B-203ENST00000554636 RTFDC1Q9BY42 306 aaPredicted RBP5.3□□□□□ -1.56
VTI1B-203ENST00000554636 MCOLN1Q9GZU1 580 aa5.3□□□□□ -1.56
VTI1B-203ENST00000554636 ZNF214Q9UL59 606 aaPredicted RBP5.3□□□□□ -1.56
VTI1B-203ENST00000554636 ATP6V0A2Q9Y487 856 aa5.3□□□□□ -1.56
VTI1B-203ENST00000554636 MYH3P11055 1940 aa5.3□□□□□ -1.56
VTI1B-203ENST00000554636 ARID1BQ8NFD5 2236 aaPredicted RBP5.29□□□□□ -1.56
VTI1B-203ENST00000554636 CDHR2Q9BYE9 1310 aa5.29□□□□□ -1.56
VTI1B-203ENST00000554636 PI4KAP2A4QPH2 592 aa5.29□□□□□ -1.56
VTI1B-203ENST00000554636 OR14I1A6ND48 311 aa5.29□□□□□ -1.56
VTI1B-203ENST00000554636 TCAF2A6NFQ2 919 aa5.29□□□□□ -1.56
VTI1B-203ENST00000554636 FADS2P1A8MWK0 482 aa5.29□□□□□ -1.56
VTI1B-203ENST00000554636 FZD9O00144 591 aa5.29□□□□□ -1.56
VTI1B-203ENST00000554636 CBFA2T2O43439 604 aa5.29□□□□□ -1.56
VTI1B-203ENST00000554636 VAMP4O75379 141 aa5.29□□□□□ -1.56
VTI1B-203ENST00000554636 KRT1P04264 644 aa5.29□□□□□ -1.56
VTI1B-203ENST00000554636 PCCAP05165 728 aaPredicted RBP5.29□□□□□ -1.56
VTI1B-203ENST00000554636 CD3EP07766 207 aa5.29□□□□□ -1.56
VTI1B-203ENST00000554636 ITGA4P13612 1032 aa5.29□□□□□ -1.56
VTI1B-203ENST00000554636 VEGFAP15692 232 aaPredicted RBP5.29□□□□□ -1.56
VTI1B-203ENST00000554636 CD247P20963 164 aa5.29□□□□□ -1.56
VTI1B-203ENST00000554636 EXOSC9Q06265 439 aaKnown RBP5.29□□□□□ -1.56
VTI1B-203ENST00000554636 SNX17Q15036 470 aa5.29□□□□□ -1.56
VTI1B-203ENST00000554636 HSF5Q4G112 596 aaPredicted RBP5.29□□□□□ -1.56
VTI1B-203ENST00000554636 RTP2Q5QGT7 225 aa5.29□□□□□ -1.56
VTI1B-203ENST00000554636 KSR2Q6VAB6 950 aa5.29□□□□□ -1.56
VTI1B-203ENST00000554636 DDX46Q7L014 1031 aaKnown RBP5.29□□□□□ -1.56
VTI1B-203ENST00000554636 ADAT2Q7Z6V5 191 aaKnown RBP5.29□□□□□ -1.56
VTI1B-203ENST00000554636 SP8Q8IXZ3 490 aa5.29□□□□□ -1.56
VTI1B-203ENST00000554636 LRRC56Q8IYG6 542 aaPredicted RBP5.29□□□□□ -1.56
VTI1B-203ENST00000554636 PI4KAP1Q8N8J0 262 aa5.29□□□□□ -1.56
VTI1B-203ENST00000554636 CCDC191Q8NCU4 936 aa5.29□□□□□ -1.56
VTI1B-203ENST00000554636 SMC1BQ8NDV3 1235 aa5.29□□□□□ -1.56
VTI1B-203ENST00000554636 CELF1Q92879 486 aaKnown RBP5.29□□□□□ -1.56
VTI1B-203ENST00000554636 ANAPC16Q96DE5 110 aa5.29□□□□□ -1.56
VTI1B-203ENST00000554636 SPATA32Q96LK8 384 aa5.29□□□□□ -1.56
VTI1B-203ENST00000554636 SGPP1Q9BX95 441 aa5.29□□□□□ -1.56
VTI1B-203ENST00000554636 SLC12A9Q9BXP2 914 aa5.29□□□□□ -1.56
VTI1B-203ENST00000554636 TGIF2Q9GZN2 237 aa5.29□□□□□ -1.56
VTI1B-203ENST00000554636 CWC25Q9NXE8 425 aaPredicted RBP5.29□□□□□ -1.56
VTI1B-203ENST00000554636 MAP3K2Q9Y2U5 619 aa5.29□□□□□ -1.56
VTI1B-203ENST00000554636 SPEF2Q9C093 1822 aa5.28□□□□□ -1.56
VTI1B-203ENST00000554636 MYOCOSA0A1B0GUC4 107 aa5.28□□□□□ -1.56
VTI1B-203ENST00000554636 A0A1W2PQH9 124 aa5.28□□□□□ -1.56
VTI1B-203ENST00000554636 PPIP5K2O43314 1243 aa5.28□□□□□ -1.56
VTI1B-203ENST00000554636 BBOX1O75936 387 aa5.28□□□□□ -1.56
VTI1B-203ENST00000554636 DDX58O95786 925 aaKnown RBP5.28□□□□□ -1.56
VTI1B-203ENST00000554636 IFNGR1P15260 489 aa5.28□□□□□ -1.56
VTI1B-203ENST00000554636 PRKCAP17252 672 aa5.28□□□□□ -1.56
VTI1B-203ENST00000554636 CFPP27918 469 aa5.28□□□□□ -1.56
VTI1B-203ENST00000554636 GJA8P48165 433 aa5.28□□□□□ -1.56
VTI1B-203ENST00000554636 GIPRP48546 466 aa5.28□□□□□ -1.56
Retrieved 100 of 20,778 RNA–protein pairs in 46.5 ms