RNA–Protein interactions for RNA: ENST00000553455.1

SYNE2-210, Transcript of spectrin repeat containing nuclear envelope protein 2, humanhuman

TSL 2 BASIC

Gene SYNE2, Length 674 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SYNE2-210ENST00000553455 TMEM62Q0P6H9 643 aa6.96□□□□□ -1.3
SYNE2-210ENST00000553455 DBPQ10586 325 aaPredicted RBP6.96□□□□□ -1.3
SYNE2-210ENST00000553455 PCBP2Q15366 365 aaKnown RBP eCLIP6.96□□□□□ -1.3
SYNE2-210ENST00000553455 CR1LQ2VPA4 569 aa6.96□□□□□ -1.3
SYNE2-210ENST00000553455 CD276Q5ZPR3 534 aa6.96□□□□□ -1.3
SYNE2-210ENST00000553455 TEPPQ6URK8 271 aa6.96□□□□□ -1.3
SYNE2-210ENST00000553455 TMC6Q7Z403 805 aa6.96□□□□□ -1.3
SYNE2-210ENST00000553455 CILP2Q8IUL8 1156 aa6.96□□□□□ -1.3
SYNE2-210ENST00000553455 ALG3Q92685 438 aa6.96□□□□□ -1.3
SYNE2-210ENST00000553455 TOE1Q96GM8 510 aaKnown RBP6.96□□□□□ -1.3
SYNE2-210ENST00000553455 ORAI2Q96SN7 254 aa6.96□□□□□ -1.3
SYNE2-210ENST00000553455 SLC13A1Q9BZW2 595 aa6.96□□□□□ -1.3
SYNE2-210ENST00000553455 CDH19Q9H159 772 aa6.96□□□□□ -1.3
SYNE2-210ENST00000553455 AASDHPPTQ9NRN7 309 aa6.96□□□□□ -1.3
SYNE2-210ENST00000553455 ZIM2Q9NZV7 527 aa6.96□□□□□ -1.3
SYNE2-210ENST00000553455 USP36Q9P275 1121 aaKnown RBP6.96□□□□□ -1.3
SYNE2-210ENST00000553455 TCEAL9Q9UHQ7 104 aa6.96□□□□□ -1.3
SYNE2-210ENST00000553455 MSRAQ9UJ68 235 aa6.96□□□□□ -1.3
SYNE2-210ENST00000553455 WASF3Q9UPY6 502 aa6.96□□□□□ -1.3
SYNE2-210ENST00000553455 ASB1Q9Y576 335 aa6.96□□□□□ -1.3
SYNE2-210ENST00000553455 TRIM75PA6NK02 468 aa6.95□□□□□ -1.3
SYNE2-210ENST00000553455 GOLGA6L22H0YM25 854 aa6.95□□□□□ -1.3
SYNE2-210ENST00000553455 ABLIM3O94929 683 aa6.95□□□□□ -1.3
SYNE2-210ENST00000553455 RBP3P10745 1247 aa6.95□□□□□ -1.3
SYNE2-210ENST00000553455 VIPR1P32241 457 aa6.95□□□□□ -1.3
SYNE2-210ENST00000553455 ZNF200P98182 395 aaPredicted RBP6.95□□□□□ -1.3
SYNE2-210ENST00000553455 ADCY1Q08828 1119 aa6.95□□□□□ -1.3
SYNE2-210ENST00000553455 PPP2R5AQ15172 486 aa6.95□□□□□ -1.3
SYNE2-210ENST00000553455 KCNMB1Q16558 191 aa6.95□□□□□ -1.3
SYNE2-210ENST00000553455 ETV3LQ6ZN32 361 aa6.95□□□□□ -1.3
SYNE2-210ENST00000553455 CXorf67Q86X51 503 aaPredicted RBP6.95□□□□□ -1.3
SYNE2-210ENST00000553455 NME9Q86XW9 330 aa6.95□□□□□ -1.3
SYNE2-210ENST00000553455 RBPJLQ9UBG7 517 aa6.95□□□□□ -1.3
SYNE2-210ENST00000553455 ZNF503-AS2A6NEH8 195 aa6.94□□□□□ -1.3
SYNE2-210ENST00000553455 GOLGA8AA7E2F4 631 aa6.94□□□□□ -1.3
SYNE2-210ENST00000553455 GOLGA8BA8MQT2 603 aa6.94□□□□□ -1.3
SYNE2-210ENST00000553455 ELL2O00472 640 aaPredicted RBP6.94□□□□□ -1.3
SYNE2-210ENST00000553455 ABLIM1O14639 778 aa6.94□□□□□ -1.3
SYNE2-210ENST00000553455 PCDHGA12O60330 932 aa6.94□□□□□ -1.3
SYNE2-210ENST00000553455 ASGR2P07307 311 aa6.94□□□□□ -1.3
SYNE2-210ENST00000553455 ITGB5P18084 799 aa6.94□□□□□ -1.3
SYNE2-210ENST00000553455 MANFP55145 182 aaKnown RBP6.94□□□□□ -1.3
SYNE2-210ENST00000553455 KRT85P78386 507 aa6.94□□□□□ -1.3
SYNE2-210ENST00000553455 RGL3Q3MIN7 710 aa6.94□□□□□ -1.3
SYNE2-210ENST00000553455 ZBTB41Q5SVQ8 909 aa6.94□□□□□ -1.3
SYNE2-210ENST00000553455 FAM26EQ8N5C1 309 aa6.94□□□□□ -1.3
SYNE2-210ENST00000553455 HIPK4Q8NE63 616 aa6.94□□□□□ -1.3
SYNE2-210ENST00000553455 ERCC4Q92889 916 aaPredicted RBP6.94□□□□□ -1.3
SYNE2-210ENST00000553455 FAXDC2Q96IV6 333 aa6.94□□□□□ -1.3
SYNE2-210ENST00000553455 RHOBTB2Q9BYZ6 727 aa6.94□□□□□ -1.3
SYNE2-210ENST00000553455 POFUT1Q9H488 388 aa6.94□□□□□ -1.3
SYNE2-210ENST00000553455 ZNF552Q9H707 407 aaPredicted RBP6.94□□□□□ -1.3
SYNE2-210ENST00000553455 CCM2LQ9NUG4 571 aaPredicted RBP6.94□□□□□ -1.3
SYNE2-210ENST00000553455 PCDHGA9Q9Y5G4 932 aaKnown RBP6.94□□□□□ -1.3
SYNE2-210ENST00000553455 PCDHGA8Q9Y5G5 932 aa6.94□□□□□ -1.3
SYNE2-210ENST00000553455 PCDHGA7Q9Y5G6 932 aa6.94□□□□□ -1.3
SYNE2-210ENST00000553455 PCDHGA6Q9Y5G7 932 aa6.94□□□□□ -1.3
SYNE2-210ENST00000553455 PCDHGA3Q9Y5H0 932 aa6.94□□□□□ -1.3
SYNE2-210ENST00000553455 PCDHGA2Q9Y5H1 932 aa6.94□□□□□ -1.3
SYNE2-210ENST00000553455 PPP2R3BQ9Y5P8 575 aa6.94□□□□□ -1.3
SYNE2-210ENST00000553455 E2F8A0AVK6 867 aa6.93□□□□□ -1.3
SYNE2-210ENST00000553455 UBA6A0AVT1 1052 aaPredicted RBP6.93□□□□□ -1.3
SYNE2-210ENST00000553455 PRAMEF22A3QJZ6 481 aa6.93□□□□□ -1.3
SYNE2-210ENST00000553455 ZNF839A8K0R7 811 aa6.93□□□□□ -1.3
SYNE2-210ENST00000553455 PRLP01236 227 aa6.93□□□□□ -1.3
SYNE2-210ENST00000553455 C8BP07358 591 aa6.93□□□□□ -1.3
SYNE2-210ENST00000553455 MYBPC3Q14896 1274 aa6.93□□□□□ -1.3
SYNE2-210ENST00000553455 PRAMEF18Q5VWM3 479 aa6.93□□□□□ -1.3
SYNE2-210ENST00000553455 LIPIQ6XZB0 460 aa6.93□□□□□ -1.3
SYNE2-210ENST00000553455 PHYKPLQ8IUZ5 450 aa6.93□□□□□ -1.3
SYNE2-210ENST00000553455 C7orf31Q8N865 590 aa6.93□□□□□ -1.3
SYNE2-210ENST00000553455 TGFBRAP1Q8WUH2 860 aa6.93□□□□□ -1.3
SYNE2-210ENST00000553455 CPA5Q8WXQ8 436 aa6.93□□□□□ -1.3
SYNE2-210ENST00000553455 ACAP3Q96P50 834 aa6.93□□□□□ -1.3
SYNE2-210ENST00000553455 CAMKK2Q96RR4 588 aa6.93□□□□□ -1.3
SYNE2-210ENST00000553455 SLC39A2Q9NP94 309 aa6.93□□□□□ -1.3
SYNE2-210ENST00000553455 UCKL1Q9NWZ5 548 aa6.93□□□□□ -1.3
SYNE2-210ENST00000553455 FAN1Q9Y2M0 1017 aa6.93□□□□□ -1.3
SYNE2-210ENST00000553455 BIN1O00499 593 aa6.92□□□□□ -1.3
SYNE2-210ENST00000553455 CFBP00751 764 aa6.92□□□□□ -1.3
SYNE2-210ENST00000553455 PTGS1P23219 599 aa6.92□□□□□ -1.3
SYNE2-210ENST00000553455 ALDH6A1Q02252 535 aaKnown RBP6.92□□□□□ -1.3
SYNE2-210ENST00000553455 ODF1Q14990 250 aa6.92□□□□□ -1.3
SYNE2-210ENST00000553455 FSCN1Q16658 493 aaKnown RBP6.92□□□□□ -1.3
SYNE2-210ENST00000553455 CCDC181Q5TID7 509 aa6.92□□□□□ -1.3
SYNE2-210ENST00000553455 PGM2L1Q6PCE3 622 aa6.92□□□□□ -1.3
SYNE2-210ENST00000553455 NOL8Q76FK4 1167 aaKnown RBP6.92□□□□□ -1.3
SYNE2-210ENST00000553455 ZNF605Q86T29 641 aa6.92□□□□□ -1.3
SYNE2-210ENST00000553455 LIN37Q96GY3 246 aaPredicted RBP6.92□□□□□ -1.3
SYNE2-210ENST00000553455 FOXB1Q99853 325 aa6.92□□□□□ -1.3
SYNE2-210ENST00000553455 AMNQ9BXJ7 453 aa6.92□□□□□ -1.3
SYNE2-210ENST00000553455 IRS2Q9Y4H2 1338 aa6.92□□□□□ -1.3
SYNE2-210ENST00000553455 CARMIL2Q6F5E8 1435 aa6.92□□□□□ -1.3
SYNE2-210ENST00000553455 NFIBO00712 420 aa6.91□□□□□ -1.3
SYNE2-210ENST00000553455 CLEC2LP0C7M8 214 aa6.91□□□□□ -1.3
SYNE2-210ENST00000553455 ENPP1P22413 925 aa6.91□□□□□ -1.3
SYNE2-210ENST00000553455 MC3RP41968 323 aa6.91□□□□□ -1.3
SYNE2-210ENST00000553455 PFKPQ01813 784 aa6.91□□□□□ -1.3
SYNE2-210ENST00000553455 CACNB2Q08289 660 aaPredicted RBP6.91□□□□□ -1.3
SYNE2-210ENST00000553455 HSP90AB2PQ58FF8 381 aa6.91□□□□□ -1.3
Retrieved 100 of 20,778 RNA–protein pairs in 77.5 ms