RNA–Protein interactions for RNA: ENST00000553340.1

SYNE3-202, Transcript of spectrin repeat containing nuclear envelope family member 3, humanhuman

TSL 1 (best) BASIC

Gene SYNE3, Length 2,615 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SYNE3-202ENST00000553340 SBF2Q86WG5 1849 aa19.15■□□□□ 0.66
SYNE3-202ENST00000553340 GOLGA6L7A0A1B0GV03 622 aa19.15■□□□□ 0.66
SYNE3-202ENST00000553340 DAPK3O43293 454 aa19.15■□□□□ 0.66
SYNE3-202ENST00000553340 ZBTB48P10074 688 aaPredicted RBP19.15■□□□□ 0.66
SYNE3-202ENST00000553340 SYCE1Q8N0S2 351 aa19.15■□□□□ 0.66
SYNE3-202ENST00000553340 RASGEF1CQ8N431 466 aa19.15■□□□□ 0.66
SYNE3-202ENST00000553340 PROCA1Q8NCQ7 364 aaPredicted RBP19.15■□□□□ 0.66
SYNE3-202ENST00000553340 SUCLA2Q9P2R7 463 aaPredicted RBP19.15■□□□□ 0.66
SYNE3-202ENST00000553340 ATP8B3O60423 1300 aa19.15■□□□□ 0.66
SYNE3-202ENST00000553340 FRMD3A2A2Y4 597 aa19.15■□□□□ 0.66
SYNE3-202ENST00000553340 CHUKO15111 745 aa19.15■□□□□ 0.66
SYNE3-202ENST00000553340 SLC26A4O43511 780 aa19.15■□□□□ 0.66
SYNE3-202ENST00000553340 RASSF9O75901 435 aa19.15■□□□□ 0.66
SYNE3-202ENST00000553340 H2AFZP0C0S5 128 aa19.15■□□□□ 0.66
SYNE3-202ENST00000553340 XRCC5P13010 732 aaKnown RBP19.15■□□□□ 0.66
SYNE3-202ENST00000553340 PON1P27169 355 aa19.15■□□□□ 0.66
SYNE3-202ENST00000553340 TMOD1P28289 359 aa19.15■□□□□ 0.66
SYNE3-202ENST00000553340 H2AFVQ71UI9 128 aa19.15■□□□□ 0.66
SYNE3-202ENST00000553340 SLFN11Q7Z7L1 901 aa19.15■□□□□ 0.66
SYNE3-202ENST00000553340 ADGRF4Q8IZF3 695 aa19.15■□□□□ 0.66
SYNE3-202ENST00000553340 NOVA2Q9UNW9 492 aaKnown RBP19.15■□□□□ 0.66
SYNE3-202ENST00000553340 A0A0A6YYK5 440 aaPredicted RBP19.14■□□□□ 0.65
SYNE3-202ENST00000553340 FLT3P36888 993 aa19.14■□□□□ 0.65
SYNE3-202ENST00000553340 CDR1P51861 262 aa19.14■□□□□ 0.65
SYNE3-202ENST00000553340 ARMC9Q7Z3E5 817 aa19.14■□□□□ 0.65
SYNE3-202ENST00000553340 DNAAF5Q86Y56 855 aa19.14■□□□□ 0.65
SYNE3-202ENST00000553340 CCDC114Q96M63 670 aa19.14■□□□□ 0.65
SYNE3-202ENST00000553340 JPH2Q9BR39 696 aaPredicted RBP19.14■□□□□ 0.65
SYNE3-202ENST00000553340 TRAF3IP3Q9Y228 551 aa19.14■□□□□ 0.65
SYNE3-202ENST00000553340 PLIN4Q96Q06 1357 aa19.14■□□□□ 0.65
SYNE3-202ENST00000553340 PPP1R11O60927 126 aaPredicted RBP19.14■□□□□ 0.65
SYNE3-202ENST00000553340 PAEPP09466 180 aa19.14■□□□□ 0.65
SYNE3-202ENST00000553340 RHBDL3P58872 404 aa19.14■□□□□ 0.65
SYNE3-202ENST00000553340 TMC3Q7Z5M5 1100 aa19.14■□□□□ 0.65
SYNE3-202ENST00000553340 RBM46Q8TBY0 533 aaKnown RBP19.14■□□□□ 0.65
SYNE3-202ENST00000553340 PSTPIP2Q9H939 334 aa19.14■□□□□ 0.65
SYNE3-202ENST00000553340 FAM114A2Q9NRY5 505 aa19.14■□□□□ 0.65
SYNE3-202ENST00000553340 SWAP70Q9UH65 585 aa19.14■□□□□ 0.65
SYNE3-202ENST00000553340 STXBP5LQ9Y2K9 1186 aa19.14■□□□□ 0.65
SYNE3-202ENST00000553340 UTP11Q9Y3A2 253 aaKnown RBP19.14■□□□□ 0.65
SYNE3-202ENST00000553340 NHSQ6T4R5 1651 aa19.14■□□□□ 0.65
SYNE3-202ENST00000553340 KIF13BQ9NQT8 1826 aa19.14■□□□□ 0.65
SYNE3-202ENST00000553340 ITGA4P13612 1032 aa19.13■□□□□ 0.65
SYNE3-202ENST00000553340 RDXP35241 583 aaKnown RBP19.13■□□□□ 0.65
SYNE3-202ENST00000553340 EIF6P56537 245 aaKnown RBP19.13■□□□□ 0.65
SYNE3-202ENST00000553340 ZNF543Q08ER8 600 aa19.13■□□□□ 0.65
SYNE3-202ENST00000553340 GRAPQ13588 217 aa19.13■□□□□ 0.65
SYNE3-202ENST00000553340 NFIXQ14938 502 aa19.13■□□□□ 0.65
SYNE3-202ENST00000553340 DAAM2Q86T65 1068 aa19.13■□□□□ 0.65
SYNE3-202ENST00000553340 GRAPLQ8TC17 118 aaPredicted RBP19.13■□□□□ 0.65
SYNE3-202ENST00000553340 GPR101Q96P66 508 aaPredicted RBP19.13■□□□□ 0.65
SYNE3-202ENST00000553340 INTUQ9ULD6 942 aa19.13■□□□□ 0.65
SYNE3-202ENST00000553340 MYH7BA7E2Y1 1941 aa19.13■□□□□ 0.65
SYNE3-202ENST00000553340 PPARDQ03181 441 aa19.13■□□□□ 0.65
SYNE3-202ENST00000553340 DHX9Q08211 1270 aaKnown RBP19.13■□□□□ 0.65
SYNE3-202ENST00000553340 KNOP1Q1ED39 458 aaKnown RBP19.13■□□□□ 0.65
SYNE3-202ENST00000553340 KRT71Q3SY84 523 aa19.13■□□□□ 0.65
SYNE3-202ENST00000553340 ARSHQ5FYA8 562 aa19.13■□□□□ 0.65
SYNE3-202ENST00000553340 SLC51AQ86UW1 340 aa19.13■□□□□ 0.65
SYNE3-202ENST00000553340 SLF2Q8IX21 1173 aa19.13■□□□□ 0.65
SYNE3-202ENST00000553340 SEC14L1Q92503 715 aa19.13■□□□□ 0.65
SYNE3-202ENST00000553340 SEC16BQ96JE7 1060 aa19.13■□□□□ 0.65
SYNE3-202ENST00000553340 DHX36Q9H2U1 1008 aaKnown RBP19.13■□□□□ 0.65
SYNE3-202ENST00000553340 SLC40A1Q9NP59 571 aa19.13■□□□□ 0.65
SYNE3-202ENST00000553340 NENFQ9UMX5 172 aa19.13■□□□□ 0.65
SYNE3-202ENST00000553340 COL24A1Q17RW2 1714 aa19.12■□□□□ 0.65
SYNE3-202ENST00000553340 LOC102724159A0A0B4J2E5 919 aa19.12■□□□□ 0.65
SYNE3-202ENST00000553340 TTI1O43156 1089 aa19.12■□□□□ 0.65
SYNE3-202ENST00000553340 CASP5P51878 434 aa19.12■□□□□ 0.65
SYNE3-202ENST00000553340 SLC12A3P55017 1021 aa19.12■□□□□ 0.65
SYNE3-202ENST00000553340 NPEPPSP55786 919 aa19.12■□□□□ 0.65
SYNE3-202ENST00000553340 MAGOHP61326 146 aaKnown RBP19.12■□□□□ 0.65
SYNE3-202ENST00000553340 PWP2Q15269 919 aaKnown RBP19.12■□□□□ 0.65
SYNE3-202ENST00000553340 DCAF17Q5H9S7 520 aaPredicted RBP19.12■□□□□ 0.65
SYNE3-202ENST00000553340 C15orf52Q6ZUT6 534 aaKnown RBP19.12■□□□□ 0.65
SYNE3-202ENST00000553340 NT5DC3Q86UY8 548 aa19.12■□□□□ 0.65
SYNE3-202ENST00000553340 CACNA2D3Q8IZS8 1091 aa19.12■□□□□ 0.65
SYNE3-202ENST00000553340 RAPGEF5Q92565 580 aa19.12■□□□□ 0.65
SYNE3-202ENST00000553340 MAGOHBQ96A72 148 aaKnown RBP19.12■□□□□ 0.65
SYNE3-202ENST00000553340 UIMC1Q96RL1 719 aa19.12■□□□□ 0.65
SYNE3-202ENST00000553340 CNOT8Q9UFF9 292 aaKnown RBP19.12■□□□□ 0.65
SYNE3-202ENST00000553340 C5orf60A6NFR6 353 aa19.12■□□□□ 0.65
SYNE3-202ENST00000553340 CALUO43852 315 aaPredicted RBP19.12■□□□□ 0.65
SYNE3-202ENST00000553340 QPCTQ16769 361 aa19.12■□□□□ 0.65
SYNE3-202ENST00000553340 CD209Q9NNX6 404 aa19.12■□□□□ 0.65
SYNE3-202ENST00000553340 EPHA7Q15375 998 aa19.11■□□□□ 0.65
SYNE3-202ENST00000553340 TCERG1LQ5VWI1 586 aa19.11■□□□□ 0.65
SYNE3-202ENST00000553340 RPAINQ86UA6 219 aa19.11■□□□□ 0.65
SYNE3-202ENST00000553340 FAM163AQ96GL9 167 aaPredicted RBP19.11■□□□□ 0.65
SYNE3-202ENST00000553340 HES6Q96HZ4 224 aa19.11■□□□□ 0.65
SYNE3-202ENST00000553340 OSBPL7Q9BZF2 842 aa19.11■□□□□ 0.65
SYNE3-202ENST00000553340 CD248Q9HCU0 757 aa19.11■□□□□ 0.65
SYNE3-202ENST00000553340 ZNF831Q5JPB2 1677 aa19.11■□□□□ 0.65
SYNE3-202ENST00000553340 F8VZ95 297 aa19.11■□□□□ 0.65
SYNE3-202ENST00000553340 PDXKO00764 312 aa19.11■□□□□ 0.65
SYNE3-202ENST00000553340 ZBTB5O15062 677 aa19.11■□□□□ 0.65
SYNE3-202ENST00000553340 MED24O75448 989 aa19.11■□□□□ 0.65
SYNE3-202ENST00000553340 TTLL1O95922 423 aa19.11■□□□□ 0.65
SYNE3-202ENST00000553340 AKR1B1P15121 316 aa19.11■□□□□ 0.65
SYNE3-202ENST00000553340 IFFO1Q0D2I5 559 aa19.11■□□□□ 0.65
Retrieved 100 of 20,778 RNA–protein pairs in 81.3 ms