RNA–Protein interactions for RNA: ENST00000551516.1

CPSF6-207, Transcript of cleavage and polyadenylation specific factor 6, humanhuman

TSL 2 BASIC

Gene CPSF6, Length 234 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CPSF6-207ENST00000551516 DBNDD2Q9BQY9 259 aa3.09□□□□□ -1.91
CPSF6-207ENST00000551516 THUMPD2Q9BTF0 503 aaKnown RBP3.09□□□□□ -1.91
CPSF6-207ENST00000551516 ISCA1Q9BUE6 129 aa3.09□□□□□ -1.91
CPSF6-207ENST00000551516 LGR4Q9BXB1 951 aa3.09□□□□□ -1.91
CPSF6-207ENST00000551516 GLIS2Q9BZE0 524 aaPredicted RBP3.09□□□□□ -1.91
CPSF6-207ENST00000551516 GPR62Q9BZJ7 368 aa3.09□□□□□ -1.91
CPSF6-207ENST00000551516 NKX2-4Q9H2Z4 354 aa3.09□□□□□ -1.91
CPSF6-207ENST00000551516 PRO3102Q9H379 93 aa3.09□□□□□ -1.91
CPSF6-207ENST00000551516 MKNK2Q9HBH9 465 aa3.09□□□□□ -1.91
CPSF6-207ENST00000551516 NCOA5Q9HCD5 579 aaKnown RBP3.09□□□□□ -1.91
CPSF6-207ENST00000551516 MIS18AQ9NYP9 233 aa3.09□□□□□ -1.91
CPSF6-207ENST00000551516 STK17AQ9UEE5 414 aa3.09□□□□□ -1.91
CPSF6-207ENST00000551516 SFMBT1Q9UHJ3 866 aa3.09□□□□□ -1.91
CPSF6-207ENST00000551516 RNF112Q9ULX5 631 aa3.09□□□□□ -1.91
CPSF6-207ENST00000551516 GPR55Q9Y2T6 319 aaPredicted RBP3.09□□□□□ -1.91
CPSF6-207ENST00000551516 COL4A3BPQ9Y5P4 624 aa3.09□□□□□ -1.91
CPSF6-207ENST00000551516 CAPN6Q9Y6Q1 641 aa3.09□□□□□ -1.91
CPSF6-207ENST00000551516 TIAM2Q8IVF5 1701 aa3.09□□□□□ -1.91
CPSF6-207ENST00000551516 ABCC4O15439 1325 aa3.09□□□□□ -1.91
CPSF6-207ENST00000551516 BCORQ6W2J9 1755 aa3.09□□□□□ -1.91
CPSF6-207ENST00000551516 ARFGEF2Q9Y6D5 1785 aa3.09□□□□□ -1.91
CPSF6-207ENST00000551516 SCN4AP35499 1836 aa3.09□□□□□ -1.92
CPSF6-207ENST00000551516 CACNA1SQ13698 1873 aa3.09□□□□□ -1.92
CPSF6-207ENST00000551516 SHISA3A0PJX4 238 aa3.08□□□□□ -1.92
CPSF6-207ENST00000551516 BTBD11A6QL63 1104 aa3.08□□□□□ -1.92
CPSF6-207ENST00000551516 PRR33A8MZF0 331 aa3.08□□□□□ -1.92
CPSF6-207ENST00000551516 WDR64B1ANS9 1081 aa3.08□□□□□ -1.92
CPSF6-207ENST00000551516 H0Y8X5 98 aa3.08□□□□□ -1.92
CPSF6-207ENST00000551516 TBX1O43435 398 aa3.08□□□□□ -1.92
CPSF6-207ENST00000551516 DLX3O60479 287 aa3.08□□□□□ -1.92
CPSF6-207ENST00000551516 IGLV1-40P01703 118 aa3.08□□□□□ -1.92
CPSF6-207ENST00000551516 CAPNS1P04632 268 aa3.08□□□□□ -1.92
CPSF6-207ENST00000551516 CEACAM5P06731 702 aa3.08□□□□□ -1.92
CPSF6-207ENST00000551516 CD3EP07766 207 aa3.08□□□□□ -1.92
CPSF6-207ENST00000551516 MYCLP1P12525 358 aaPredicted RBP3.08□□□□□ -1.92
CPSF6-207ENST00000551516 CDK11BP21127 795 aaKnown RBP3.08□□□□□ -1.92
CPSF6-207ENST00000551516 TPP2P29144 1249 aaPredicted RBP3.08□□□□□ -1.92
CPSF6-207ENST00000551516 CNGA1P29973 690 aa3.08□□□□□ -1.92
CPSF6-207ENST00000551516 ALDH1B1P30837 517 aa3.08□□□□□ -1.92
CPSF6-207ENST00000551516 GMPSP49915 693 aaPredicted RBP3.08□□□□□ -1.92
CPSF6-207ENST00000551516 GFRA1P56159 465 aa3.08□□□□□ -1.92
CPSF6-207ENST00000551516 PCBP3P57721 371 aaKnown RBP3.08□□□□□ -1.92
CPSF6-207ENST00000551516 TAF7Q15545 349 aaPredicted RBP3.08□□□□□ -1.92
CPSF6-207ENST00000551516 CPSF6Q16630 551 aaKnown RBP eCLIP3.08□□□□□ -1.92
CPSF6-207ENST00000551516 KRT24Q2M2I5 525 aa3.08□□□□□ -1.92
CPSF6-207ENST00000551516 TM4SF20Q53R12 229 aa3.08□□□□□ -1.92
CPSF6-207ENST00000551516 CDKAL1Q5VV42 579 aa3.08□□□□□ -1.92
CPSF6-207ENST00000551516 CIAPIN1Q6FI81 312 aa3.08□□□□□ -1.92
CPSF6-207ENST00000551516 CNNM4Q6P4Q7 775 aa3.08□□□□□ -1.92
CPSF6-207ENST00000551516 KRT26Q7Z3Y9 468 aa3.08□□□□□ -1.92
CPSF6-207ENST00000551516 NLRP10Q86W26 655 aa3.08□□□□□ -1.92
CPSF6-207ENST00000551516 NBPF5PQ86XG9 351 aaPredicted RBP3.08□□□□□ -1.92
CPSF6-207ENST00000551516 PTPRN2Q92932 1015 aa3.08□□□□□ -1.92
CPSF6-207ENST00000551516 OSBP2Q969R2 916 aa3.08□□□□□ -1.92
CPSF6-207ENST00000551516 TCTN2Q96GX1 697 aa3.08□□□□□ -1.92
CPSF6-207ENST00000551516 GPATCH3Q96I76 525 aa3.08□□□□□ -1.92
CPSF6-207ENST00000551516 HDAC8Q9BY41 377 aa3.08□□□□□ -1.92
CPSF6-207ENST00000551516 PCDH12Q9NPG4 1184 aa3.08□□□□□ -1.92
CPSF6-207ENST00000551516 TPSG1Q9NRR2 321 aa3.08□□□□□ -1.92
CPSF6-207ENST00000551516 ADARB2Q9NS39 739 aaKnown RBP3.08□□□□□ -1.92
CPSF6-207ENST00000551516 RNF186Q9NXI6 227 aa3.08□□□□□ -1.92
CPSF6-207ENST00000551516 SAGE1Q9NXZ1 904 aa3.08□□□□□ -1.92
CPSF6-207ENST00000551516 NDOR1Q9UHB4 597 aa3.08□□□□□ -1.92
CPSF6-207ENST00000551516 MINPP1Q9UNW1 487 aa3.08□□□□□ -1.92
CPSF6-207ENST00000551516 NIP7Q9Y221 180 aaKnown RBP eCLIP3.08□□□□□ -1.92
CPSF6-207ENST00000551516 KNSTRNQ9Y448 316 aa3.08□□□□□ -1.92
CPSF6-207ENST00000551516 BACE2Q9Y5Z0 518 aa3.08□□□□□ -1.92
CPSF6-207ENST00000551516 AOX1Q06278 1338 aa3.08□□□□□ -1.92
CPSF6-207ENST00000551516 CDHR2Q9BYE9 1310 aa3.08□□□□□ -1.92
CPSF6-207ENST00000551516 C2orf71A6NGG8 1288 aa3.07□□□□□ -1.92
CPSF6-207ENST00000551516 H3BS24 57 aa3.07□□□□□ -1.92
CPSF6-207ENST00000551516 AQP7O14520 342 aa3.07□□□□□ -1.92
CPSF6-207ENST00000551516 IRS4O14654 1257 aaPredicted RBP3.07□□□□□ -1.92
CPSF6-207ENST00000551516 AURKAO14965 403 aa3.07□□□□□ -1.92
CPSF6-207ENST00000551516 CYP26A1O43174 497 aa3.07□□□□□ -1.92
CPSF6-207ENST00000551516 CA12O43570 354 aa3.07□□□□□ -1.92
CPSF6-207ENST00000551516 BBOX1O75936 387 aa3.07□□□□□ -1.92
CPSF6-207ENST00000551516 SCG5P05408 212 aa3.07□□□□□ -1.92
CPSF6-207ENST00000551516 SRFP11831 508 aa3.07□□□□□ -1.92
CPSF6-207ENST00000551516 NAT1P18440 290 aa3.07□□□□□ -1.92
CPSF6-207ENST00000551516 ENDOUP21128 410 aaKnown RBP3.07□□□□□ -1.92
CPSF6-207ENST00000551516 BMP8BP34820 402 aa3.07□□□□□ -1.92
CPSF6-207ENST00000551516 FLT3P36888 993 aa3.07□□□□□ -1.92
CPSF6-207ENST00000551516 TM4SF4P48230 202 aa3.07□□□□□ -1.92
CPSF6-207ENST00000551516 SEPHS1P49903 392 aa3.07□□□□□ -1.92
CPSF6-207ENST00000551516 CLCN7P51798 805 aa3.07□□□□□ -1.92
CPSF6-207ENST00000551516 OXCT1P55809 520 aa3.07□□□□□ -1.92
CPSF6-207ENST00000551516 SCRN1Q12765 414 aa3.07□□□□□ -1.92
CPSF6-207ENST00000551516 KCNMA1Q12791 1236 aa3.07□□□□□ -1.92
CPSF6-207ENST00000551516 TCIRG1Q13488 830 aa3.07□□□□□ -1.92
CPSF6-207ENST00000551516 SF1Q15637 639 aaKnown RBP3.07□□□□□ -1.92
CPSF6-207ENST00000551516 AOC3Q16853 763 aa3.07□□□□□ -1.92
CPSF6-207ENST00000551516 TRIM61Q5EBN2 209 aa3.07□□□□□ -1.92
CPSF6-207ENST00000551516 CT47A1Q5JQC4 288 aaPredicted RBP3.07□□□□□ -1.92
CPSF6-207ENST00000551516 CC2D1BQ5T0F9 858 aaKnown RBP3.07□□□□□ -1.92
CPSF6-207ENST00000551516 IQCEQ6IPM2 695 aa3.07□□□□□ -1.92
CPSF6-207ENST00000551516 CRTC3Q6UUV7 619 aa3.07□□□□□ -1.92
CPSF6-207ENST00000551516 USP53Q70EK8 1073 aa3.07□□□□□ -1.92
CPSF6-207ENST00000551516 MAMDC2Q7Z304 686 aaPredicted RBP3.07□□□□□ -1.92
CPSF6-207ENST00000551516 THAP5Q7Z6K1 395 aa3.07□□□□□ -1.92
Retrieved 100 of 20,778 RNA–protein pairs in 80.6 ms