RNA–Protein interactions for RNA: ENST00000545894.1

DDB1-224, Transcript of damage specific DNA binding protein 1, humanhuman

TSL 2

Gene DDB1, Length 2,282 nt, Biotype retained intron, Subcellular localisation Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
DDB1-224ENST00000545894 EPB41L5Q9HCM4 733 aa12.6□□□□□ -0.39
DDB1-224ENST00000545894 NLRC4Q9NPP4 1024 aa12.6□□□□□ -0.39
DDB1-224ENST00000545894 NFU1Q9UMS0 254 aa12.6□□□□□ -0.39
DDB1-224ENST00000545894 FOCADQ5VW36 1801 aa12.6□□□□□ -0.39
DDB1-224ENST00000545894 COL2A1P02458 1487 aaPredicted RBP12.6□□□□□ -0.39
DDB1-224ENST00000545894 NDUFAB1O14561 156 aa12.6□□□□□ -0.39
DDB1-224ENST00000545894 PALMO75781 387 aa12.6□□□□□ -0.39
DDB1-224ENST00000545894 KRT14P02533 472 aa12.6□□□□□ -0.39
DDB1-224ENST00000545894 ERCC3P19447 782 aa12.6□□□□□ -0.39
DDB1-224ENST00000545894 GUCY2DQ02846 1103 aa12.6□□□□□ -0.39
DDB1-224ENST00000545894 EHHADHQ08426 723 aa12.6□□□□□ -0.39
DDB1-224ENST00000545894 NAB2Q15742 525 aa12.6□□□□□ -0.39
DDB1-224ENST00000545894 KDM7AQ6ZMT4 941 aa12.6□□□□□ -0.39
DDB1-224ENST00000545894 PLCD3Q8N3E9 789 aa12.6□□□□□ -0.39
DDB1-224ENST00000545894 SH2D3CQ8N5H7 860 aa12.6□□□□□ -0.39
DDB1-224ENST00000545894 TMEM260Q9NX78 707 aa12.6□□□□□ -0.39
DDB1-224ENST00000545894 COL4A3BPQ9Y5P4 624 aa12.6□□□□□ -0.39
DDB1-224ENST00000545894 ATXN2Q99700 1313 aaKnown RBP12.6□□□□□ -0.39
DDB1-224ENST00000545894 FAM153BP0C7A2 387 aa12.59□□□□□ -0.39
DDB1-224ENST00000545894 GUCY2CP25092 1073 aa12.59□□□□□ -0.39
DDB1-224ENST00000545894 FKBP3Q00688 224 aaKnown RBP12.59□□□□□ -0.39
DDB1-224ENST00000545894 PDIA5Q14554 519 aa12.59□□□□□ -0.39
DDB1-224ENST00000545894 LRRC41Q15345 812 aa12.59□□□□□ -0.39
DDB1-224ENST00000545894 FAM153CQ494X1 144 aa12.59□□□□□ -0.39
DDB1-224ENST00000545894 CCDC40Q4G0X9 1142 aa12.59□□□□□ -0.39
DDB1-224ENST00000545894 FAM83BQ5T0W9 1011 aa12.59□□□□□ -0.39
DDB1-224ENST00000545894 KRT79Q5XKE5 535 aa12.59□□□□□ -0.39
DDB1-224ENST00000545894 KCTD16Q68DU8 428 aa12.59□□□□□ -0.39
DDB1-224ENST00000545894 USP17L2Q6R6M4 530 aa12.59□□□□□ -0.39
DDB1-224ENST00000545894 SPATS2Q86XZ4 545 aaKnown RBP12.59□□□□□ -0.39
DDB1-224ENST00000545894 CD302Q8IX05 232 aa12.59□□□□□ -0.39
DDB1-224ENST00000545894 MYOCDQ8IZQ8 938 aa12.59□□□□□ -0.39
DDB1-224ENST00000545894 IFT81Q8WYA0 676 aa12.59□□□□□ -0.39
DDB1-224ENST00000545894 DDX12PQ92771 950 aa12.59□□□□□ -0.39
DDB1-224ENST00000545894 CDCA5Q96FF9 252 aa12.59□□□□□ -0.39
DDB1-224ENST00000545894 PIGSQ96S52 555 aa12.59□□□□□ -0.39
DDB1-224ENST00000545894 VAT1LQ9HCJ6 419 aa12.59□□□□□ -0.39
DDB1-224ENST00000545894 PI4KBQ9UBF8 816 aa12.59□□□□□ -0.39
DDB1-224ENST00000545894 FAM153AQ9UHL3 310 aa12.59□□□□□ -0.39
DDB1-224ENST00000545894 SAMM50Q9Y512 469 aa12.59□□□□□ -0.39
DDB1-224ENST00000545894 DDX60LQ5H9U9 1706 aaKnown RBP12.59□□□□□ -0.39
DDB1-224ENST00000545894 NAV1Q8NEY1 1877 aa12.59□□□□□ -0.39
DDB1-224ENST00000545894 ESYT3A0FGR9 886 aa12.59□□□□□ -0.39
DDB1-224ENST00000545894 ZNF233A6NK53 670 aa12.59□□□□□ -0.39
DDB1-224ENST00000545894 ZEB2O60315 1214 aa12.59□□□□□ -0.39
DDB1-224ENST00000545894 TLR2O60603 784 aa12.59□□□□□ -0.39
DDB1-224ENST00000545894 ITGBL1O95965 494 aaPredicted RBP12.59□□□□□ -0.39
DDB1-224ENST00000545894 HLA-DOAP06340 250 aa12.59□□□□□ -0.39
DDB1-224ENST00000545894 ATP1A2P50993 1020 aa12.59□□□□□ -0.39
DDB1-224ENST00000545894 EMC10Q5UCC4 262 aa12.59□□□□□ -0.39
DDB1-224ENST00000545894 MIGA2Q7L4E1 593 aa12.59□□□□□ -0.39
DDB1-224ENST00000545894 SNX29Q8TEQ0 813 aa12.59□□□□□ -0.39
DDB1-224ENST00000545894 WHAMMQ8TF30 809 aa12.59□□□□□ -0.39
DDB1-224ENST00000545894 KAT2BQ92831 832 aa12.59□□□□□ -0.39
DDB1-224ENST00000545894 PCDHGC5Q9Y5F6 944 aa12.59□□□□□ -0.39
DDB1-224ENST00000545894 ZSCAN5CA6NGD5 496 aaPredicted RBP12.58□□□□□ -0.4
DDB1-224ENST00000545894 FAM196BA6NMK8 535 aa12.58□□□□□ -0.4
DDB1-224ENST00000545894 hCG_1984214I3L0E3 225 aa12.58□□□□□ -0.4
DDB1-224ENST00000545894 SLC37A4O43826 429 aa12.58□□□□□ -0.4
DDB1-224ENST00000545894 NOL4O94818 638 aa12.58□□□□□ -0.4
DDB1-224ENST00000545894 FTCDO95954 541 aa12.58□□□□□ -0.4
DDB1-224ENST00000545894 GABPAQ06546 454 aa12.58□□□□□ -0.4
DDB1-224ENST00000545894 TMEM119Q4V9L6 283 aa12.58□□□□□ -0.4
DDB1-224ENST00000545894 ZCWPW2Q504Y3 356 aa12.58□□□□□ -0.4
DDB1-224ENST00000545894 MEI1Q5TIA1 1274 aa12.58□□□□□ -0.4
DDB1-224ENST00000545894 ZNF713Q8N859 430 aaPredicted RBP12.58□□□□□ -0.4
DDB1-224ENST00000545894 C1orf131Q8NDD1 294 aaKnown RBP12.58□□□□□ -0.4
DDB1-224ENST00000545894 GLIS3Q8NEA6 775 aa12.58□□□□□ -0.4
DDB1-224ENST00000545894 NEDD1Q8NHV4 660 aa12.58□□□□□ -0.4
DDB1-224ENST00000545894 RNPC3Q96LT9 517 aaKnown RBP12.58□□□□□ -0.4
DDB1-224ENST00000545894 KRT12Q99456 494 aa12.58□□□□□ -0.4
DDB1-224ENST00000545894 LSM14BQ9BX40 385 aaKnown RBP12.58□□□□□ -0.4
DDB1-224ENST00000545894 DNAJC18Q9H819 358 aa12.58□□□□□ -0.4
DDB1-224ENST00000545894 SSC5DA1L4H1 1573 aa12.58□□□□□ -0.4
DDB1-224ENST00000545894 POTEMA6NI47 508 aa12.58□□□□□ -0.4
DDB1-224ENST00000545894 KLRC1P26715 233 aa12.58□□□□□ -0.4
DDB1-224ENST00000545894 LSP1P33241 339 aa12.58□□□□□ -0.4
DDB1-224ENST00000545894 MYH10P35580 1976 aa12.58□□□□□ -0.4
DDB1-224ENST00000545894 CDK8P49336 464 aa12.58□□□□□ -0.4
DDB1-224ENST00000545894 DNA2P51530 1060 aa12.58□□□□□ -0.4
DDB1-224ENST00000545894 POLR2FP61218 127 aaKnown RBP12.58□□□□□ -0.4
DDB1-224ENST00000545894 SEPT2Q15019 361 aa12.58□□□□□ -0.4
DDB1-224ENST00000545894 CDC37Q16543 378 aaPredicted RBP12.58□□□□□ -0.4
DDB1-224ENST00000545894 SLC18A3Q16572 532 aa12.58□□□□□ -0.4
DDB1-224ENST00000545894 CASKIN2Q8WXE0 1202 aa12.58□□□□□ -0.4
DDB1-224ENST00000545894 PIK3R5Q8WYR1 880 aa12.58□□□□□ -0.4
DDB1-224ENST00000545894 INPP4AQ96PE3 977 aaPredicted RBP12.58□□□□□ -0.4
DDB1-224ENST00000545894 NUDT12Q9BQG2 462 aa12.58□□□□□ -0.4
DDB1-224ENST00000545894 YY1AP1Q9H869 796 aa12.58□□□□□ -0.4
DDB1-224ENST00000545894 SERPINB13Q9UIV8 391 aa12.58□□□□□ -0.4
DDB1-224ENST00000545894 FZD1Q9UP38 647 aa12.58□□□□□ -0.4
DDB1-224ENST00000545894 KIAA0754O94854 1291 aa12.57□□□□□ -0.4
DDB1-224ENST00000545894 TDP2O95551 362 aa12.57□□□□□ -0.4
DDB1-224ENST00000545894 NR1D1P20393 614 aa12.57□□□□□ -0.4
DDB1-224ENST00000545894 GUCY2FP51841 1108 aa12.57□□□□□ -0.4
DDB1-224ENST00000545894 TNNC1P63316 161 aa12.57□□□□□ -0.4
DDB1-224ENST00000545894 MAP3K10Q02779 954 aa12.57□□□□□ -0.4
DDB1-224ENST00000545894 COASYQ13057 564 aa12.57□□□□□ -0.4
DDB1-224ENST00000545894 SUPT20HL1Q3ZLR7 823 aa12.57□□□□□ -0.4
DDB1-224ENST00000545894 MCTP2Q6DN12 878 aa12.57□□□□□ -0.4
Retrieved 100 of 20,778 RNA–protein pairs in 21.7 ms