RNA–Protein interactions for RNA: ENST00000543356.6

GNE-206, Transcript of glucosamine (UDP-N-acetyl)-2-epimerase/N-acetylmannosamine kinase, humanhuman

TSL 1 (best) BASIC

Gene GNE, Length 2,576 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
GNE-206ENST00000543356 COL4A3BPQ9Y5P4 624 aa10.34□□□□□ -0.75
GNE-206ENST00000543356 PLXNB2O15031 1838 aa10.34□□□□□ -0.75
GNE-206ENST00000543356 ARID2Q68CP9 1835 aa10.34□□□□□ -0.75
GNE-206ENST00000543356 BTBD19C9JJ37 291 aa10.34□□□□□ -0.75
GNE-206ENST00000543356 ITGBL1O95965 494 aaPredicted RBP10.34□□□□□ -0.75
GNE-206ENST00000543356 GUCY2CP25092 1073 aa10.34□□□□□ -0.75
GNE-206ENST00000543356 PSMC5P62195 406 aa10.34□□□□□ -0.75
GNE-206ENST00000543356 CACNB1Q02641 598 aaPredicted RBP10.34□□□□□ -0.75
GNE-206ENST00000543356 Q3C1V9 767 aa10.34□□□□□ -0.75
GNE-206ENST00000543356 PDZRN4Q6ZMN7 1036 aaPredicted RBP10.34□□□□□ -0.75
GNE-206ENST00000543356 TSG101Q99816 390 aa10.34□□□□□ -0.75
GNE-206ENST00000543356 JPH1Q9HDC5 661 aaPredicted RBP10.34□□□□□ -0.75
GNE-206ENST00000543356 OLFML3Q9NRN5 406 aa10.34□□□□□ -0.75
GNE-206ENST00000543356 SAMM50Q9Y512 469 aa10.34□□□□□ -0.75
GNE-206ENST00000543356 WDR81Q562E7 1941 aa10.34□□□□□ -0.75
GNE-206ENST00000543356 ARHGEF35A5YM69 484 aa10.33□□□□□ -0.76
GNE-206ENST00000543356 DCAF8L1A6NGE4 600 aa10.33□□□□□ -0.76
GNE-206ENST00000543356 FGFR1OPO95684 399 aaKnown RBP10.33□□□□□ -0.76
GNE-206ENST00000543356 CYP2C8P10632 490 aa10.33□□□□□ -0.76
GNE-206ENST00000543356 GCLCP48506 637 aaPredicted RBP10.33□□□□□ -0.76
GNE-206ENST00000543356 ZNF131P52739 623 aa10.33□□□□□ -0.76
GNE-206ENST00000543356 COPB1P53618 953 aaKnown RBP10.33□□□□□ -0.76
GNE-206ENST00000543356 RAD51AP2Q09MP3 1159 aa10.33□□□□□ -0.76
GNE-206ENST00000543356 KCTD2Q14681 263 aa10.33□□□□□ -0.76
GNE-206ENST00000543356 BMT2Q1RMZ1 405 aa10.33□□□□□ -0.76
GNE-206ENST00000543356 ZCWPW2Q504Y3 356 aa10.33□□□□□ -0.76
GNE-206ENST00000543356 EPM2AIP1Q7L775 607 aaPredicted RBP10.33□□□□□ -0.76
GNE-206ENST00000543356 FILIP1Q7Z7B0 1213 aa10.33□□□□□ -0.76
GNE-206ENST00000543356 SFR1Q86XK3 245 aa10.33□□□□□ -0.76
GNE-206ENST00000543356 GLIS3Q8NEA6 775 aa10.33□□□□□ -0.76
GNE-206ENST00000543356 SRRTQ9BXP5 876 aaKnown RBP10.33□□□□□ -0.76
GNE-206ENST00000543356 MAGEC2Q9UBF1 373 aaPredicted RBP10.33□□□□□ -0.76
GNE-206ENST00000543356 MORF4L1Q9UBU8 362 aa10.33□□□□□ -0.76
GNE-206ENST00000543356 SEL1LQ9UBV2 794 aa10.33□□□□□ -0.76
GNE-206ENST00000543356 KCNG1Q9UIX4 513 aa10.33□□□□□ -0.76
GNE-206ENST00000543356 PCDHA10Q9Y5I2 948 aa10.33□□□□□ -0.76
GNE-206ENST00000543356 DOCK5Q9H7D0 1870 aa10.33□□□□□ -0.76
GNE-206ENST00000543356 ZNF500O60304 480 aaPredicted RBP10.33□□□□□ -0.76
GNE-206ENST00000543356 DKC1O60832 514 aaKnown RBP eCLIP10.33□□□□□ -0.76
GNE-206ENST00000543356 PBX1P40424 430 aa10.33□□□□□ -0.76
GNE-206ENST00000543356 CCNA1P78396 465 aa10.33□□□□□ -0.76
GNE-206ENST00000543356 TBX2Q13207 712 aaPredicted RBP10.33□□□□□ -0.76
GNE-206ENST00000543356 CST9Q5W186 159 aa10.33□□□□□ -0.76
GNE-206ENST00000543356 SPECC1LQ69YQ0 1117 aa10.33□□□□□ -0.76
GNE-206ENST00000543356 LRRC8AQ8IWT6 810 aa10.33□□□□□ -0.76
GNE-206ENST00000543356 GPRC5AQ8NFJ5 357 aa10.33□□□□□ -0.76
GNE-206ENST00000543356 SMCR8Q8TEV9 937 aaPredicted RBP10.33□□□□□ -0.76
GNE-206ENST00000543356 CACTINQ8WUQ7 758 aaKnown RBP10.33□□□□□ -0.76
GNE-206ENST00000543356 SCFD1Q8WVM8 642 aa10.33□□□□□ -0.76
GNE-206ENST00000543356 FGD4Q96M96 766 aa10.33□□□□□ -0.76
GNE-206ENST00000543356 TIPINQ9BVW5 301 aa10.33□□□□□ -0.76
GNE-206ENST00000543356 ANKEF1Q9NU02 776 aa10.33□□□□□ -0.76
GNE-206ENST00000543356 SLC9A2Q9UBY0 812 aa10.33□□□□□ -0.76
GNE-206ENST00000543356 ZNF236Q9UL36 1845 aa10.33□□□□□ -0.76
GNE-206ENST00000543356 UBE4BO95155 1302 aa10.32□□□□□ -0.76
GNE-206ENST00000543356 ITIH6Q6UXX5 1313 aa10.32□□□□□ -0.76
GNE-206ENST00000543356 ZBTB39O15060 712 aa10.32□□□□□ -0.76
GNE-206ENST00000543356 FAM13AO94988 1023 aa10.32□□□□□ -0.76
GNE-206ENST00000543356 PSAPP07602 524 aa10.32□□□□□ -0.76
GNE-206ENST00000543356 LRRC41Q15345 812 aa10.32□□□□□ -0.76
GNE-206ENST00000543356 UGCGQ16739 394 aa10.32□□□□□ -0.76
GNE-206ENST00000543356 PPP4R3CPQ6ZMV5 832 aa10.32□□□□□ -0.76
GNE-206ENST00000543356 MTERF4Q7Z6M4 381 aaKnown RBP10.32□□□□□ -0.76
GNE-206ENST00000543356 MORC4Q8TE76 937 aa10.32□□□□□ -0.76
GNE-206ENST00000543356 PARK7Q99497 189 aaKnown RBP10.32□□□□□ -0.76
GNE-206ENST00000543356 FGFBP2Q9BYJ0 223 aa10.32□□□□□ -0.76
GNE-206ENST00000543356 R3HDMLQ9H3Y0 253 aa10.32□□□□□ -0.76
GNE-206ENST00000543356 SRCAPQ6ZRS2 3230 aa10.32□□□□□ -0.76
GNE-206ENST00000543356 RSPH10B2B2RC85 870 aa10.32□□□□□ -0.76
GNE-206ENST00000543356 RSPH10BP0C881 870 aa10.32□□□□□ -0.76
GNE-206ENST00000543356 YWHABP31946 246 aaKnown RBP10.32□□□□□ -0.76
GNE-206ENST00000543356 RARRES1P49788 294 aa10.32□□□□□ -0.76
GNE-206ENST00000543356 FSTL1Q12841 308 aa10.32□□□□□ -0.76
GNE-206ENST00000543356 PADI6Q6TGC4 694 aa10.32□□□□□ -0.76
GNE-206ENST00000543356 ZC3H3Q8IXZ2 948 aaKnown RBP10.32□□□□□ -0.76
GNE-206ENST00000543356 ATP6V0A1Q93050 837 aa10.32□□□□□ -0.76
GNE-206ENST00000543356 CNOT6LQ96LI5 555 aaKnown RBP10.32□□□□□ -0.76
GNE-206ENST00000543356 KCTD10Q9H3F6 313 aa10.32□□□□□ -0.76
GNE-206ENST00000543356 ZHX3Q9H4I2 956 aa10.32□□□□□ -0.76
GNE-206ENST00000543356 PARVGQ9HBI0 331 aa10.32□□□□□ -0.76
GNE-206ENST00000543356 TAB2Q9NYJ8 693 aa10.32□□□□□ -0.76
GNE-206ENST00000543356 TBC1D7Q9P0N9 293 aa10.32□□□□□ -0.76
GNE-206ENST00000543356 PLXNA1Q9UIW2 1896 aa10.32□□□□□ -0.76
GNE-206ENST00000543356 IGSF9BQ9UPX0 1349 aa10.32□□□□□ -0.76
GNE-206ENST00000543356 EIF3DO15371 548 aaKnown RBP eCLIP10.31□□□□□ -0.76
GNE-206ENST00000543356 TGFB3P10600 412 aa10.31□□□□□ -0.76
GNE-206ENST00000543356 ACTR2P61160 394 aa10.31□□□□□ -0.76
GNE-206ENST00000543356 MKRN3Q13064 507 aaKnown RBP10.31□□□□□ -0.76
GNE-206ENST00000543356 MIS18BP1Q6P0N0 1132 aa10.31□□□□□ -0.76
GNE-206ENST00000543356 ARMCX5Q6P1M9 558 aa10.31□□□□□ -0.76
GNE-206ENST00000543356 ABHD15Q6UXT9 468 aa10.31□□□□□ -0.76
GNE-206ENST00000543356 LRRC55Q6ZSA7 311 aa10.31□□□□□ -0.76
GNE-206ENST00000543356 LGALS16A8MUM7 142 aa10.31□□□□□ -0.76
GNE-206ENST00000543356 N4BP3O15049 544 aa10.31□□□□□ -0.76
GNE-206ENST00000543356 TEX33O43247 280 aa10.31□□□□□ -0.76
GNE-206ENST00000543356 ATG7O95352 703 aa10.31□□□□□ -0.76
GNE-206ENST00000543356 PGK2P07205 417 aa10.31□□□□□ -0.76
GNE-206ENST00000543356 SUPT20HL2P0C7V6 817 aa10.31□□□□□ -0.76
GNE-206ENST00000543356 HUNKP57058 714 aa10.31□□□□□ -0.76
GNE-206ENST00000543356 SP2Q02086 613 aa10.31□□□□□ -0.76
Retrieved 100 of 20,778 RNA–protein pairs in 31 ms