RNA–Protein interactions for RNA: ENST00000540763.5

DDX55-207, Transcript of DEAD-box helicase 55, humanhuman

TSL 3

Gene DDX55, Length 799 nt, Biotype nonsense mediated decay, Subcellular localisation Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
DDX55-207ENST00000540763 RPLP2P05387 115 aaKnown RBP21.81■■□□□ 1.08
DDX55-207ENST00000540763 GRIK4Q16099 956 aa21.81■■□□□ 1.08
DDX55-207ENST00000540763 UGCGQ16739 394 aa21.81■■□□□ 1.08
DDX55-207ENST00000540763 ZNF484Q5JVG2 852 aa21.81■■□□□ 1.08
DDX55-207ENST00000540763 SERINC5Q86VE9 423 aa21.81■■□□□ 1.08
DDX55-207ENST00000540763 C4orf19Q8IY42 314 aa21.81■■□□□ 1.08
DDX55-207ENST00000540763 CKAP2LQ8IYA6 745 aa21.81■■□□□ 1.08
DDX55-207ENST00000540763 CCDC155Q8N6L0 562 aa21.81■■□□□ 1.08
DDX55-207ENST00000540763 IGSF22Q8N9C0 903 aa21.81■■□□□ 1.08
DDX55-207ENST00000540763 CAGE1Q8TC20 777 aa21.81■■□□□ 1.08
DDX55-207ENST00000540763 PITPNM1O00562 1244 aa21.8■■□□□ 1.08
DDX55-207ENST00000540763 LYPLA2O95372 231 aa21.8■■□□□ 1.08
DDX55-207ENST00000540763 BRD1O95696 1058 aa21.8■■□□□ 1.08
DDX55-207ENST00000540763 INSRRP14616 1297 aa21.8■■□□□ 1.08
DDX55-207ENST00000540763 MUTP22033 750 aa21.8■■□□□ 1.08
DDX55-207ENST00000540763 TECP42680 631 aa21.8■■□□□ 1.08
DDX55-207ENST00000540763 PKP1Q13835 747 aa21.8■■□□□ 1.08
DDX55-207ENST00000540763 SF3A1Q15459 793 aaKnown RBP21.8■■□□□ 1.08
DDX55-207ENST00000540763 XKR3Q5GH77 459 aa21.8■■□□□ 1.08
DDX55-207ENST00000540763 HAUS3Q68CZ6 603 aa21.8■■□□□ 1.08
DDX55-207ENST00000540763 ATL3Q6DD88 541 aa21.8■■□□□ 1.08
DDX55-207ENST00000540763 DTHD1Q6ZMT9 781 aa21.8■■□□□ 1.08
DDX55-207ENST00000540763 ERMNQ8TAM6 284 aa21.8■■□□□ 1.08
DDX55-207ENST00000540763 PPP1R13LQ8WUF5 828 aa21.8■■□□□ 1.08
DDX55-207ENST00000540763 HSD17B14Q9BPX1 270 aa21.8■■□□□ 1.08
DDX55-207ENST00000540763 EIF2AK1Q9BQI3 630 aaKnown RBP21.8■■□□□ 1.08
DDX55-207ENST00000540763 TUFT1Q9NNX1 390 aa21.8■■□□□ 1.08
DDX55-207ENST00000540763 PRDM5Q9NQX1 630 aaPredicted RBP21.8■■□□□ 1.08
DDX55-207ENST00000540763 NRBP2Q9NSY0 501 aa21.8■■□□□ 1.08
DDX55-207ENST00000540763 SETD4Q9NVD3 440 aa21.8■■□□□ 1.08
DDX55-207ENST00000540763 EVPLQ92817 2033 aa21.79■■□□□ 1.08
DDX55-207ENST00000540763 TRIM43BA6NCK2 446 aa21.79■■□□□ 1.08
DDX55-207ENST00000540763 CAND2O75155 1236 aa21.79■■□□□ 1.08
DDX55-207ENST00000540763 BFSP2Q13515 415 aa21.79■■□□□ 1.08
DDX55-207ENST00000540763 HIC1Q14526 733 aa21.79■■□□□ 1.08
DDX55-207ENST00000540763 TAF2Q6P1X5 1199 aa21.79■■□□□ 1.08
DDX55-207ENST00000540763 SH3RF1Q7Z6J0 888 aa21.79■■□□□ 1.08
DDX55-207ENST00000540763 BANK1Q8NDB2 785 aa21.79■■□□□ 1.08
DDX55-207ENST00000540763 TRIM43Q96BQ3 446 aaPredicted RBP21.79■■□□□ 1.08
DDX55-207ENST00000540763 ZNF396Q96N95 335 aaPredicted RBP21.79■■□□□ 1.08
DDX55-207ENST00000540763 LXNQ9BS40 222 aa21.79■■□□□ 1.08
DDX55-207ENST00000540763 NOC4LQ9BVI4 516 aaKnown RBP21.79■■□□□ 1.08
DDX55-207ENST00000540763 HIPK3Q9H422 1215 aa21.79■■□□□ 1.08
DDX55-207ENST00000540763 ZSWIM4Q9H7M6 989 aa21.79■■□□□ 1.08
DDX55-207ENST00000540763 TUBE1Q9UJT0 475 aa21.79■■□□□ 1.08
DDX55-207ENST00000540763 PPME1Q9Y570 386 aa21.79■■□□□ 1.08
DDX55-207ENST00000540763 TIMP1P01033 207 aa21.78■■□□□ 1.08
DDX55-207ENST00000540763 PTPAQ15257 358 aa21.78■■□□□ 1.08
DDX55-207ENST00000540763 RPAINQ86UA6 219 aa21.78■■□□□ 1.08
DDX55-207ENST00000540763 DYDC2Q96IM9 177 aa21.78■■□□□ 1.08
DDX55-207ENST00000540763 POLR3CQ9BUI4 534 aaPredicted RBP21.78■■□□□ 1.08
DDX55-207ENST00000540763 NIFKQ9BYG3 293 aaKnown RBP21.78■■□□□ 1.08
DDX55-207ENST00000540763 LRWD1Q9UFC0 647 aa21.78■■□□□ 1.08
DDX55-207ENST00000540763 ZBTB42B2RXF5 422 aa21.77■■□□□ 1.08
DDX55-207ENST00000540763 TREHO43280 583 aa21.77■■□□□ 1.08
DDX55-207ENST00000540763 SLITRK3O94933 977 aa21.77■■□□□ 1.08
DDX55-207ENST00000540763 STBD1O95210 358 aa21.77■■□□□ 1.08
DDX55-207ENST00000540763 CYP2C9P11712 490 aa21.77■■□□□ 1.08
DDX55-207ENST00000540763 RAG1P15918 1043 aa21.77■■□□□ 1.08
DDX55-207ENST00000540763 RPA1P27694 616 aa21.77■■□□□ 1.08
DDX55-207ENST00000540763 DDIT3P35638 169 aa21.77■■□□□ 1.08
DDX55-207ENST00000540763 NASPP49321 788 aaPredicted RBP21.77■■□□□ 1.08
DDX55-207ENST00000540763 ZNF200P98182 395 aaPredicted RBP21.77■■□□□ 1.08
DDX55-207ENST00000540763 MARCH8Q5T0T0 291 aa21.77■■□□□ 1.08
DDX55-207ENST00000540763 FAM173BQ6P4H8 233 aa21.77■■□□□ 1.08
DDX55-207ENST00000540763 DHX38Q92620 1227 aaKnown RBP21.77■■□□□ 1.08
DDX55-207ENST00000540763 AK8Q96MA6 479 aa21.77■■□□□ 1.08
DDX55-207ENST00000540763 USP28Q96RU2 1077 aa21.77■■□□□ 1.08
DDX55-207ENST00000540763 RGL1Q9NZL6 768 aa21.77■■□□□ 1.08
DDX55-207ENST00000540763 ZMYND8Q9ULU4 1186 aaPredicted RBP21.77■■□□□ 1.08
DDX55-207ENST00000540763 CLIC4Q9Y696 253 aa21.77■■□□□ 1.08
DDX55-207ENST00000540763 SIP14410 1827 aa21.77■■□□□ 1.08
DDX55-207ENST00000540763 TARBP2Q15633 366 aaKnown RBP21.76■■□□□ 1.07
DDX55-207ENST00000540763 IL17AQ16552 155 aa21.76■■□□□ 1.07
DDX55-207ENST00000540763 TRIM71Q2Q1W2 868 aaKnown RBP21.76■■□□□ 1.07
DDX55-207ENST00000540763 DAXXQ9UER7 740 aaPredicted RBP21.76■■□□□ 1.07
DDX55-207ENST00000540763 PCDHA2Q9Y5H9 948 aa21.76■■□□□ 1.07
DDX55-207ENST00000540763 ATP6V1DQ9Y5K8 247 aa21.76■■□□□ 1.07
DDX55-207ENST00000540763 TCHHQ07283 1943 aa21.76■■□□□ 1.07
DDX55-207ENST00000540763 MAGEB2O15479 319 aa21.75■■□□□ 1.07
DDX55-207ENST00000540763 SLC26A4O43511 780 aa21.75■■□□□ 1.07
DDX55-207ENST00000540763 PARNO95453 639 aaKnown RBP21.75■■□□□ 1.07
DDX55-207ENST00000540763 YEATS4O95619 227 aa21.75■■□□□ 1.07
DDX55-207ENST00000540763 SPATA31C1P0DKV0 1188 aa21.75■■□□□ 1.07
DDX55-207ENST00000540763 XRCC6P12956 609 aaKnown RBP eCLIP21.75■■□□□ 1.078e-8■■■□□ 14.6
DDX55-207ENST00000540763 SYN1P17600 705 aa21.75■■□□□ 1.07
DDX55-207ENST00000540763 NUCB2P80303 420 aa21.75■■□□□ 1.07
DDX55-207ENST00000540763 CYP4A11Q02928 519 aa21.75■■□□□ 1.07
DDX55-207ENST00000540763 SLC39A14Q15043 492 aa21.75■■□□□ 1.07
DDX55-207ENST00000540763 MFSD5Q6N075 450 aa21.75■■□□□ 1.07
DDX55-207ENST00000540763 MTHFD1LQ6UB35 978 aa21.75■■□□□ 1.07
DDX55-207ENST00000540763 ANO5Q75V66 913 aa21.75■■□□□ 1.07
DDX55-207ENST00000540763 OTUD6AQ7L8S5 288 aa21.75■■□□□ 1.07
DDX55-207ENST00000540763 KCTD17Q8N5Z5 321 aa21.75■■□□□ 1.07
DDX55-207ENST00000540763 WRAP73Q9P2S5 460 aaPredicted RBP21.75■■□□□ 1.07
DDX55-207ENST00000540763 SEPT9Q9UHD8 586 aaPredicted RBP21.75■■□□□ 1.07
DDX55-207ENST00000540763 ZDHHC9Q9Y397 364 aa21.75■■□□□ 1.07
DDX55-207ENST00000540763 SCN5AQ14524 2016 aa21.74■■□□□ 1.07
DDX55-207ENST00000540763 SMIM35A0A1B0GVV1 85 aa21.74■■□□□ 1.07
DDX55-207ENST00000540763 VWA3AA6NCI4 1184 aa21.74■■□□□ 1.07
Retrieved 100 of 20,778 RNA–protein pairs in 29.1 ms