RNA–Protein interactions for RNA: ENST00000534548.6

NCAPD3-214, Transcript of non-SMC condensin II complex subunit D3, humanhuman

APPRIS P2 TSL 1 (best) BASIC

Gene NCAPD3, Length 5,061 nt, Biotype protein coding, Subcellular localisation Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
NCAPD3-214ENST00000534548 PCDHA4Q9UN74 947 aa11.04□□□□□ -0.64
NCAPD3-214ENST00000534548 JAG2Q9Y219 1238 aa11.04□□□□□ -0.64
NCAPD3-214ENST00000534548 SEC23IPQ9Y6Y8 1000 aaKnown RBP11.04□□□□□ -0.64
NCAPD3-214ENST00000534548 STK36Q9NRP7 1315 aa11.04□□□□□ -0.64
NCAPD3-214ENST00000534548 PRPF3O43395 683 aaKnown RBP11.04□□□□□ -0.64
NCAPD3-214ENST00000534548 CHMP2AO43633 222 aa11.04□□□□□ -0.64
NCAPD3-214ENST00000534548 AP1G2O75843 785 aa11.04□□□□□ -0.64
NCAPD3-214ENST00000534548 NQO1P15559 274 aaKnown RBP11.04□□□□□ -0.64
NCAPD3-214ENST00000534548 DEUP1Q05D60 604 aa11.04□□□□□ -0.64
NCAPD3-214ENST00000534548 ARL6IP4Q66PJ3 421 aaKnown RBP11.04□□□□□ -0.64
NCAPD3-214ENST00000534548 MDM1Q8TC05 714 aa11.04□□□□□ -0.64
NCAPD3-214ENST00000534548 SCINQ9Y6U3 715 aa11.04□□□□□ -0.64
NCAPD3-214ENST00000534548 UBN2Q6ZU65 1347 aa11.04□□□□□ -0.64
NCAPD3-214ENST00000534548 USP17L12C9JPN9 530 aa11.03□□□□□ -0.64
NCAPD3-214ENST00000534548 USP17L21D6R901 530 aa11.03□□□□□ -0.64
NCAPD3-214ENST00000534548 HAUS5O94927 633 aa11.03□□□□□ -0.64
NCAPD3-214ENST00000534548 AGTP01019 485 aa11.03□□□□□ -0.64
NCAPD3-214ENST00000534548 ADD2P35612 726 aa11.03□□□□□ -0.64
NCAPD3-214ENST00000534548 AGGF1Q8N302 714 aaeCLIP11.03□□□□□ -0.64
NCAPD3-214ENST00000534548 TRIML2Q8N7C3 387 aa11.03□□□□□ -0.64
NCAPD3-214ENST00000534548 NLRP7Q8WX94 980 aa11.03□□□□□ -0.64
NCAPD3-214ENST00000534548 GRAMD1AQ96CP6 724 aa11.03□□□□□ -0.64
NCAPD3-214ENST00000534548 TTC1Q99614 292 aa11.03□□□□□ -0.64
NCAPD3-214ENST00000534548 ANLNQ9NQW6 1124 aa11.03□□□□□ -0.64
NCAPD3-214ENST00000534548 RAD51CO43502 376 aa11.03□□□□□ -0.64
NCAPD3-214ENST00000534548 LRRC63Q05C16 580 aa11.03□□□□□ -0.64
NCAPD3-214ENST00000534548 MKRN3Q13064 507 aaKnown RBP11.03□□□□□ -0.64
NCAPD3-214ENST00000534548 CDC37Q16543 378 aaPredicted RBP11.03□□□□□ -0.64
NCAPD3-214ENST00000534548 CYB5R4Q7L1T6 521 aa11.03□□□□□ -0.64
NCAPD3-214ENST00000534548 PROCA1Q8NCQ7 364 aaPredicted RBP11.03□□□□□ -0.64
NCAPD3-214ENST00000534548 IFT122Q9HBG6 1241 aa11.03□□□□□ -0.64
NCAPD3-214ENST00000534548 SENP2Q9HC62 589 aa11.03□□□□□ -0.64
NCAPD3-214ENST00000534548 ARPP21Q9UBL0 812 aaPredicted RBP11.03□□□□□ -0.64
NCAPD3-214ENST00000534548 SAP30BPQ9UHR5 308 aaKnown RBP11.03□□□□□ -0.64
NCAPD3-214ENST00000534548 DIS3Q9Y2L1 958 aaKnown RBP11.03□□□□□ -0.64
NCAPD3-214ENST00000534548 SYF2O95926 243 aaKnown RBP11.03□□□□□ -0.64
NCAPD3-214ENST00000534548 WDR78Q5VTH9 848 aa11.03□□□□□ -0.64
NCAPD3-214ENST00000534548 DCUN1D2Q6PH85 259 aa11.03□□□□□ -0.64
NCAPD3-214ENST00000534548 APLFQ8IW19 511 aaPredicted RBP11.03□□□□□ -0.64
NCAPD3-214ENST00000534548 TRIM55Q9BYV6 548 aa11.03□□□□□ -0.64
NCAPD3-214ENST00000534548 KDM4CQ9H3R0 1056 aa11.03□□□□□ -0.64
NCAPD3-214ENST00000534548 FGFR1OP2Q9NVK5 253 aa11.03□□□□□ -0.64
NCAPD3-214ENST00000534548 EHD2Q9NZN4 543 aa11.03□□□□□ -0.64
NCAPD3-214ENST00000534548 TFRCP02786 760 aaKnown RBP11.03□□□□□ -0.64
NCAPD3-214ENST00000534548 ATF7P17544 494 aaPredicted RBP11.03□□□□□ -0.64
NCAPD3-214ENST00000534548 MX2P20592 715 aa11.03□□□□□ -0.64
NCAPD3-214ENST00000534548 COPS2P61201 443 aa11.03□□□□□ -0.64
NCAPD3-214ENST00000534548 PICALMQ13492 652 aa11.03□□□□□ -0.64
NCAPD3-214ENST00000534548 TMC4Q7Z404 712 aa11.03□□□□□ -0.64
NCAPD3-214ENST00000534548 HIPK4Q8NE63 616 aa11.03□□□□□ -0.64
NCAPD3-214ENST00000534548 RSAD2Q8WXG1 361 aa11.03□□□□□ -0.64
NCAPD3-214ENST00000534548 ATP2A3Q93084 1043 aa11.03□□□□□ -0.64
NCAPD3-214ENST00000534548 LBHD1Q9BQE6 289 aaPredicted RBP11.03□□□□□ -0.64
NCAPD3-214ENST00000534548 NDE1Q9NXR1 346 aa11.03□□□□□ -0.64
NCAPD3-214ENST00000534548 DMGDHQ9UI17 866 aaKnown RBP11.03□□□□□ -0.64
NCAPD3-214ENST00000534548 EZH2Q15910 746 aaKnown RBP11.02□□□□□ -0.64
NCAPD3-214ENST00000534548 PAPD7Q5XG87 772 aaKnown RBP11.02□□□□□ -0.64
NCAPD3-214ENST00000534548 FUKQ8N0W3 1084 aa11.02□□□□□ -0.64
NCAPD3-214ENST00000534548 TAB3Q8N5C8 712 aaPredicted RBP11.02□□□□□ -0.64
NCAPD3-214ENST00000534548 DTX3LQ8TDB6 740 aa11.02□□□□□ -0.64
NCAPD3-214ENST00000534548 MAML1Q92585 1016 aa11.02□□□□□ -0.64
NCAPD3-214ENST00000534548 FAM161BQ96MY7 647 aa11.02□□□□□ -0.64
NCAPD3-214ENST00000534548 XAB2Q9HCS7 855 aaKnown RBP11.02□□□□□ -0.64
NCAPD3-214ENST00000534548 RAB20Q9NX57 234 aa11.02□□□□□ -0.64
NCAPD3-214ENST00000534548 DDX20Q9UHI6 824 aaKnown RBP11.02□□□□□ -0.64
NCAPD3-214ENST00000534548 DCTN4Q9UJW0 460 aa11.02□□□□□ -0.64
NCAPD3-214ENST00000534548 HSD17B3P37058 310 aa11.02□□□□□ -0.65
NCAPD3-214ENST00000534548 ANTXR2P58335 489 aa11.02□□□□□ -0.65
NCAPD3-214ENST00000534548 AP2B1P63010 937 aa11.02□□□□□ -0.65
NCAPD3-214ENST00000534548 KCNB1Q14721 858 aa11.02□□□□□ -0.65
NCAPD3-214ENST00000534548 CCDC14Q49A88 953 aa11.02□□□□□ -0.65
NCAPD3-214ENST00000534548 ANKRD20A4Q4UJ75 823 aa11.02□□□□□ -0.65
NCAPD3-214ENST00000534548 ANKRD20A2Q5SQ80 823 aa11.02□□□□□ -0.65
NCAPD3-214ENST00000534548 ANKRD20A1Q5TYW2 823 aa11.02□□□□□ -0.65
NCAPD3-214ENST00000534548 C1orf146Q5VVC0 180 aa11.02□□□□□ -0.65
NCAPD3-214ENST00000534548 CXorf38Q8TB03 319 aa11.02□□□□□ -0.65
NCAPD3-214ENST00000534548 TEKT1Q969V4 418 aa11.02□□□□□ -0.65
NCAPD3-214ENST00000534548 RHBDL2Q9NX52 303 aa11.02□□□□□ -0.65
NCAPD3-214ENST00000534548 BCLAF1Q9NYF8 920 aaKnown RBP eCLIP11.02□□□□□ -0.651e-6■■■■□ 25.5
NCAPD3-214ENST00000534548 PCDHA12Q9UN75 941 aa11.02□□□□□ -0.65
NCAPD3-214ENST00000534548 FAM83BQ5T0W9 1011 aa11.02□□□□□ -0.65
NCAPD3-214ENST00000534548 RFX8Q6ZV50 586 aa11.02□□□□□ -0.65
NCAPD3-214ENST00000534548 PNMA1Q8ND90 353 aa11.02□□□□□ -0.65
NCAPD3-214ENST00000534548 GREM2Q9H772 168 aa11.02□□□□□ -0.65
NCAPD3-214ENST00000534548 RFX7Q2KHR2 1363 aa11.02□□□□□ -0.65
NCAPD3-214ENST00000534548 SOS2Q07890 1332 aaPredicted RBP11.02□□□□□ -0.65
NCAPD3-214ENST00000534548 CIAO1O76071 339 aa11.02□□□□□ -0.65
NCAPD3-214ENST00000534548 CPP00450 1065 aa11.02□□□□□ -0.65
NCAPD3-214ENST00000534548 PLS3P13797 630 aa11.02□□□□□ -0.65
NCAPD3-214ENST00000534548 KAZNQ674X7 775 aa11.02□□□□□ -0.65
NCAPD3-214ENST00000534548 OLFML2BQ68BL8 750 aa11.02□□□□□ -0.65
NCAPD3-214ENST00000534548 GRAMD4Q6IC98 578 aa11.02□□□□□ -0.65
NCAPD3-214ENST00000534548 DDX42Q86XP3 938 aaKnown RBP eCLIP11.02□□□□□ -0.65
NCAPD3-214ENST00000534548 TBC1D10CQ8IV04 446 aa11.02□□□□□ -0.65
NCAPD3-214ENST00000534548 GJA10Q969M2 543 aa11.02□□□□□ -0.65
NCAPD3-214ENST00000534548 NAF1Q96HR8 494 aaKnown RBP11.02□□□□□ -0.65
NCAPD3-214ENST00000534548 ZBTB21Q9ULJ3 1066 aa11.02□□□□□ -0.65
NCAPD3-214ENST00000534548 C15orf41Q9Y2V0 281 aa11.02□□□□□ -0.65
NCAPD3-214ENST00000534548 WDR19Q8NEZ3 1342 aa11.01□□□□□ -0.65
NCAPD3-214ENST00000534548 DKC1O60832 514 aaKnown RBP eCLIP11.01□□□□□ -0.65
Retrieved 100 of 20,778 RNA–protein pairs in 105.5 ms