RNA–Protein interactions for RNA: ENST00000532504.5

PPFIA1-222, Transcript of PTPRF interacting protein alpha 1, humanhuman

TSL 1 (best)

Gene PPFIA1, Length 5,159 nt, Biotype nonsense mediated decay, Subcellular localisation Cytoplasm, Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PPFIA1-222ENST00000532504 GLTPD2A6NH11 291 aa17.13■□□□□ 0.33
PPFIA1-222ENST00000532504 E7EVH7 732 aa17.13■□□□□ 0.33
PPFIA1-222ENST00000532504 FBXO16Q8IX29 292 aaPredicted RBP17.13■□□□□ 0.33
PPFIA1-222ENST00000532504 FAM163AQ96GL9 167 aaPredicted RBP17.13■□□□□ 0.33
PPFIA1-222ENST00000532504 NOL12Q9UGY1 213 aaKnown RBP eCLIP17.13■□□□□ 0.33
PPFIA1-222ENST00000532504 FAM184BQ9ULE4 1060 aa17.13■□□□□ 0.33
PPFIA1-222ENST00000532504 V9GYY5 206 aaPredicted RBP17.13■□□□□ 0.33
PPFIA1-222ENST00000532504 ONECUT3O60422 494 aaPredicted RBP17.12■□□□□ 0.33
PPFIA1-222ENST00000532504 UPP2O95045 317 aa17.12■□□□□ 0.33
PPFIA1-222ENST00000532504 ALCAMQ13740 583 aa17.12■□□□□ 0.33
PPFIA1-222ENST00000532504 GCNT4Q9P109 453 aa17.12■□□□□ 0.33
PPFIA1-222ENST00000532504 SUCLA2Q9P2R7 463 aaPredicted RBP17.12■□□□□ 0.33
PPFIA1-222ENST00000532504 ZKSCAN5Q9Y2L8 839 aa17.12■□□□□ 0.33
PPFIA1-222ENST00000532504 NFIBO00712 420 aa17.12■□□□□ 0.33
PPFIA1-222ENST00000532504 MAPK4P31152 587 aa17.12■□□□□ 0.33
PPFIA1-222ENST00000532504 SPATC1LQ9H0A9 340 aa17.12■□□□□ 0.33
PPFIA1-222ENST00000532504 UBE2TQ9NPD8 197 aaPredicted RBP17.12■□□□□ 0.33
PPFIA1-222ENST00000532504 HIP1RO75146 1068 aa17.12■□□□□ 0.33
PPFIA1-222ENST00000532504 STAM2O75886 525 aa17.12■□□□□ 0.33
PPFIA1-222ENST00000532504 MYZAPP0CAP1 466 aa17.12■□□□□ 0.33
PPFIA1-222ENST00000532504 NSFP46459 744 aaKnown RBP17.12■□□□□ 0.33
PPFIA1-222ENST00000532504 ATP2C1P98194 919 aaPredicted RBP17.12■□□□□ 0.33
PPFIA1-222ENST00000532504 COASYQ13057 564 aa17.12■□□□□ 0.33
PPFIA1-222ENST00000532504 DEFB115Q30KQ5 88 aa17.12■□□□□ 0.33
PPFIA1-222ENST00000532504 PLA2G4FQ68DD2 849 aa17.12■□□□□ 0.33
PPFIA1-222ENST00000532504 AMIGO3Q86WK7 504 aa17.12■□□□□ 0.33
PPFIA1-222ENST00000532504 GLT1D1Q96MS3 346 aa17.12■□□□□ 0.33
PPFIA1-222ENST00000532504 PIN4Q9Y237 131 aaKnown RBP17.12■□□□□ 0.33
PPFIA1-222ENST00000532504 ATP2A1O14983 1001 aa17.12■□□□□ 0.33
PPFIA1-222ENST00000532504 ALDH1A1P00352 501 aa17.12■□□□□ 0.33
PPFIA1-222ENST00000532504 OR6B3Q8NGW1 331 aa17.12■□□□□ 0.33
PPFIA1-222ENST00000532504 IFT81Q8WYA0 676 aa17.12■□□□□ 0.33
PPFIA1-222ENST00000532504 LBHD1Q9BQE6 289 aaPredicted RBP17.12■□□□□ 0.33
PPFIA1-222ENST00000532504 MROH8Q9H579 483 aa17.12■□□□□ 0.33
PPFIA1-222ENST00000532504 ARL1P40616 181 aaPredicted RBP17.11■□□□□ 0.33
PPFIA1-222ENST00000532504 ZRSR2Q15696 482 aaKnown RBP17.11■□□□□ 0.33
PPFIA1-222ENST00000532504 XKR3Q5GH77 459 aa17.11■□□□□ 0.33
PPFIA1-222ENST00000532504 RNF180Q86T96 592 aa17.11■□□□□ 0.33
PPFIA1-222ENST00000532504 TSPYL1Q9H0U9 437 aa17.11■□□□□ 0.33
PPFIA1-222ENST00000532504 ASCC2Q9H1I8 757 aaPredicted RBP17.11■□□□□ 0.33
PPFIA1-222ENST00000532504 NPHP3-ACAD11A0A0J9YXS1 232 aa17.11■□□□□ 0.33
PPFIA1-222ENST00000532504 C15orf52Q6ZUT6 534 aaKnown RBP17.11■□□□□ 0.33
PPFIA1-222ENST00000532504 TSNARE1Q96NA8 513 aa17.11■□□□□ 0.33
PPFIA1-222ENST00000532504 KIF2CQ99661 725 aa17.11■□□□□ 0.33
PPFIA1-222ENST00000532504 KIAA1683Q9H0B3 1180 aa17.11■□□□□ 0.33
PPFIA1-222ENST00000532504 FAM204AQ9H8W3 233 aa17.11■□□□□ 0.33
PPFIA1-222ENST00000532504 HPS5Q9UPZ3 1129 aa17.11■□□□□ 0.33
PPFIA1-222ENST00000532504 IRF6O14896 467 aa17.11■□□□□ 0.33
PPFIA1-222ENST00000532504 ORC2Q13416 577 aaPredicted RBP17.11■□□□□ 0.33
PPFIA1-222ENST00000532504 MAN2A1Q16706 1144 aa17.11■□□□□ 0.33
PPFIA1-222ENST00000532504 ZNF394Q53GI3 561 aa17.11■□□□□ 0.33
PPFIA1-222ENST00000532504 SAAL1Q96ER3 474 aa17.11■□□□□ 0.33
PPFIA1-222ENST00000532504 KATNAL1Q9BW62 490 aa17.11■□□□□ 0.33
PPFIA1-222ENST00000532504 PAXBP1Q9Y5B6 917 aa17.11■□□□□ 0.33
PPFIA1-222ENST00000532504 CEP104O60308 925 aa17.11■□□□□ 0.33
PPFIA1-222ENST00000532504 PTPRAP18433 802 aa17.11■□□□□ 0.33
PPFIA1-222ENST00000532504 ATN1P54259 1190 aaPredicted RBP17.11■□□□□ 0.33
PPFIA1-222ENST00000532504 PEX26Q7Z412 305 aa17.11■□□□□ 0.33
PPFIA1-222ENST00000532504 ZMYND12Q9H0C1 365 aa17.11■□□□□ 0.33
PPFIA1-222ENST00000532504 EFCC1Q9HA90 598 aa17.11■□□□□ 0.33
PPFIA1-222ENST00000532504 PPP2R3AQ06190 1150 aa17.1■□□□□ 0.33
PPFIA1-222ENST00000532504 GMCL1Q96IK5 515 aa17.1■□□□□ 0.33
PPFIA1-222ENST00000532504 DESI2Q9BSY9 194 aa17.1■□□□□ 0.33
PPFIA1-222ENST00000532504 C2orf40Q9H1Z8 148 aa17.1■□□□□ 0.33
PPFIA1-222ENST00000532504 RHBDL3P58872 404 aa17.1■□□□□ 0.33
PPFIA1-222ENST00000532504 PPATQ06203 517 aa17.1■□□□□ 0.33
PPFIA1-222ENST00000532504 DGKDQ16760 1214 aa17.1■□□□□ 0.33
PPFIA1-222ENST00000532504 LRRC71Q8N4P6 559 aa17.1■□□□□ 0.33
PPFIA1-222ENST00000532504 HEXIM2Q96MH2 286 aaKnown RBP17.1■□□□□ 0.33
PPFIA1-222ENST00000532504 TRIM17Q9Y577 477 aa17.1■□□□□ 0.33
PPFIA1-222ENST00000532504 SMIM22K7EJ46 135 aa17.1■□□□□ 0.33
PPFIA1-222ENST00000532504 FKBP1CQ5VVH2 108 aa17.1■□□□□ 0.33
PPFIA1-222ENST00000532504 LRP10Q7Z4F1 713 aa17.1■□□□□ 0.33
PPFIA1-222ENST00000532504 ZNF579Q8NAF0 562 aaKnown RBP17.1■□□□□ 0.33
PPFIA1-222ENST00000532504 GOLPH3LQ9H4A5 285 aa17.1■□□□□ 0.33
PPFIA1-222ENST00000532504 SLITRK6Q9H5Y7 841 aa17.1■□□□□ 0.33
PPFIA1-222ENST00000532504 GOLGA8SH3BPF8 625 aa17.1■□□□□ 0.33
PPFIA1-222ENST00000532504 LDHAP00338 332 aaKnown RBP17.1■□□□□ 0.33
PPFIA1-222ENST00000532504 POLR2BP30876 1174 aaKnown RBP17.1■□□□□ 0.33
PPFIA1-222ENST00000532504 SND1Q7KZF4 910 aaKnown RBP eCLIP17.1■□□□□ 0.33
PPFIA1-222ENST00000532504 GMCL1P1Q8NEA9 526 aa17.1■□□□□ 0.33
PPFIA1-222ENST00000532504 MAP3K14Q99558 947 aa17.1■□□□□ 0.33
PPFIA1-222ENST00000532504 MON2Q7Z3U7 1717 aa17.09■□□□□ 0.33
PPFIA1-222ENST00000532504 TRIM49BA6NDI0 452 aa17.09■□□□□ 0.33
PPFIA1-222ENST00000532504 EEF1GP26641 437 aaKnown RBP17.09■□□□□ 0.33
PPFIA1-222ENST00000532504 PRKCEQ02156 737 aa17.09■□□□□ 0.33
PPFIA1-222ENST00000532504 PPP2R5DQ14738 602 aa17.09■□□□□ 0.33
PPFIA1-222ENST00000532504 NSMCE1Q8WV22 266 aa17.09■□□□□ 0.33
PPFIA1-222ENST00000532504 IL17RBQ9NRM6 502 aa17.09■□□□□ 0.33
PPFIA1-222ENST00000532504 IMPACTQ9P2X3 320 aa17.09■□□□□ 0.33
PPFIA1-222ENST00000532504 RWDD2AQ9UIY3 292 aa17.09■□□□□ 0.33
PPFIA1-222ENST00000532504 ZBTB24O43167 697 aaPredicted RBP17.09■□□□□ 0.33
PPFIA1-222ENST00000532504 ARHGAP6O43182 974 aa17.09■□□□□ 0.33
PPFIA1-222ENST00000532504 RHOXF2BP0C7M4 288 aa17.09■□□□□ 0.33
PPFIA1-222ENST00000532504 EZRP15311 586 aaKnown RBP17.09■□□□□ 0.33
PPFIA1-222ENST00000532504 MAP2K1Q02750 393 aaPredicted RBP17.09■□□□□ 0.33
PPFIA1-222ENST00000532504 SKIV2LQ15477 1246 aaKnown RBP17.09■□□□□ 0.33
PPFIA1-222ENST00000532504 SURF1Q15526 300 aa17.09■□□□□ 0.33
PPFIA1-222ENST00000532504 PHLDB2Q86SQ0 1253 aa17.09■□□□□ 0.33
PPFIA1-222ENST00000532504 RHOXF2Q9BQY4 288 aa17.09■□□□□ 0.33
Retrieved 100 of 20,778 RNA–protein pairs in 185.4 ms