RNA–Protein interactions for RNA: ENST00000522552.5

SKP1-209, Transcript of S-phase kinase associated protein 1, humanhuman

APPRIS ALT1 TSL 1 (best) BASIC

Gene SKP1, Length 1,683 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SKP1-209ENST00000522552 CASC1Q6TDU7 716 aa4.68□□□□□ -1.66
SKP1-209ENST00000522552 HSCBQ8IWL3 235 aa4.68□□□□□ -1.66
SKP1-209ENST00000522552 PUM2Q8TB72 1066 aaKnown RBP eCLIP4.68□□□□□ -1.665e-46■■□□□ 14
SKP1-209ENST00000522552 ABHD17AQ96GS6 310 aa4.68□□□□□ -1.66
SKP1-209ENST00000522552 GMCL1Q96IK5 515 aa4.68□□□□□ -1.66
SKP1-209ENST00000522552 SLC2A13Q96QE2 648 aa4.68□□□□□ -1.66
SKP1-209ENST00000522552 CORO1BQ9BR76 489 aa4.68□□□□□ -1.66
SKP1-209ENST00000522552 LSM14BQ9BX40 385 aaKnown RBP4.68□□□□□ -1.66
SKP1-209ENST00000522552 STK31Q9BXU1 1019 aa4.68□□□□□ -1.66
SKP1-209ENST00000522552 NRSN2Q9GZP1 204 aa4.68□□□□□ -1.66
SKP1-209ENST00000522552 NOL6Q9H6R4 1146 aaKnown RBP4.68□□□□□ -1.66
SKP1-209ENST00000522552 WASH6PQ9NQA3 447 aa4.68□□□□□ -1.66
SKP1-209ENST00000522552 PADI4Q9UM07 663 aa4.68□□□□□ -1.66
SKP1-209ENST00000522552 PCDHGC4Q9Y5F7 938 aa4.68□□□□□ -1.66
SKP1-209ENST00000522552 GPR45Q9Y5Y3 372 aa4.68□□□□□ -1.66
SKP1-209ENST00000522552 FSD2A1L4K1 749 aa4.67□□□□□ -1.66
SKP1-209ENST00000522552 CCDC66A2RUB6 948 aa4.67□□□□□ -1.66
SKP1-209ENST00000522552 A6NLC8 198 aa4.67□□□□□ -1.66
SKP1-209ENST00000522552 CKMT1AP12532 417 aa4.67□□□□□ -1.66
SKP1-209ENST00000522552 LSP1P33241 339 aa4.67□□□□□ -1.66
SKP1-209ENST00000522552 MTNR1BP49286 362 aa4.67□□□□□ -1.66
SKP1-209ENST00000522552 DNM2P50570 870 aa4.67□□□□□ -1.66
SKP1-209ENST00000522552 AFF1P51825 1210 aaKnown RBP4.67□□□□□ -1.66
SKP1-209ENST00000522552 KRT83P78385 493 aa4.67□□□□□ -1.66
SKP1-209ENST00000522552 SMAD3P84022 425 aaKnown RBP4.67□□□□□ -1.66
SKP1-209ENST00000522552 ZNF543Q08ER8 600 aa4.67□□□□□ -1.66
SKP1-209ENST00000522552 PAK1Q13153 545 aa4.67□□□□□ -1.66
SKP1-209ENST00000522552 POLD3Q15054 466 aaPredicted RBP4.67□□□□□ -1.66
SKP1-209ENST00000522552 SMAD2Q15796 467 aaKnown RBP4.67□□□□□ -1.66
SKP1-209ENST00000522552 PPM1JQ5JR12 505 aa4.67□□□□□ -1.66
SKP1-209ENST00000522552 SLC10A5Q5PT55 438 aa4.67□□□□□ -1.66
SKP1-209ENST00000522552 NBPF12Q5TAG4 269 aaPredicted RBP4.67□□□□□ -1.66
SKP1-209ENST00000522552 HIBCHQ6NVY1 386 aaPredicted RBP4.67□□□□□ -1.66
SKP1-209ENST00000522552 TMCO3Q6UWJ1 677 aa4.67□□□□□ -1.66
SKP1-209ENST00000522552 RSPO2Q6UXX9 243 aaPredicted RBP4.67□□□□□ -1.66
SKP1-209ENST00000522552 NEK10Q6ZWH5 1172 aa4.67□□□□□ -1.66
SKP1-209ENST00000522552 PHF6Q8IWS0 365 aaKnown RBP eCLIP4.67□□□□□ -1.66
SKP1-209ENST00000522552 PPIL6Q8IXY8 311 aa4.67□□□□□ -1.66
SKP1-209ENST00000522552 SYTL1Q8IYJ3 562 aa4.67□□□□□ -1.66
SKP1-209ENST00000522552 CISD2Q8N5K1 135 aaKnown RBP4.67□□□□□ -1.66
SKP1-209ENST00000522552 C2orf69Q8N8R5 385 aa4.67□□□□□ -1.66
SKP1-209ENST00000522552 ZNF610Q8N9Z0 462 aa4.67□□□□□ -1.66
SKP1-209ENST00000522552 SSH1Q8WYL5 1049 aa4.67□□□□□ -1.66
SKP1-209ENST00000522552 ATP6V1E2Q96A05 226 aa4.67□□□□□ -1.66
SKP1-209ENST00000522552 LTV1Q96GA3 475 aaPredicted RBP4.67□□□□□ -1.66
SKP1-209ENST00000522552 MYCBPQ99417 103 aaPredicted RBP4.67□□□□□ -1.66
SKP1-209ENST00000522552 ZDHHC5Q9C0B5 715 aa4.67□□□□□ -1.66
SKP1-209ENST00000522552 PDGFDQ9GZP0 370 aaPredicted RBP4.67□□□□□ -1.66
SKP1-209ENST00000522552 BTBD1Q9H0C5 482 aa4.67□□□□□ -1.66
SKP1-209ENST00000522552 MAGEH1Q9H213 219 aa4.67□□□□□ -1.66
SKP1-209ENST00000522552 IGFLR1Q9H665 355 aa4.67□□□□□ -1.66
SKP1-209ENST00000522552 SOX17Q9H6I2 414 aaPredicted RBP4.67□□□□□ -1.66
SKP1-209ENST00000522552 DCP1AQ9NPI6 582 aaPredicted RBP4.67□□□□□ -1.66
SKP1-209ENST00000522552 MBIPQ9NS73 344 aa4.67□□□□□ -1.66
SKP1-209ENST00000522552 GIMAP2Q9UG22 337 aa4.67□□□□□ -1.66
SKP1-209ENST00000522552 PPP1R9AQ9ULJ8 1098 aa4.67□□□□□ -1.66
SKP1-209ENST00000522552 TRIM33Q9UPN9 1127 aa4.67□□□□□ -1.66
SKP1-209ENST00000522552 SNX13Q9Y5W8 968 aa4.67□□□□□ -1.66
SKP1-209ENST00000522552 NPFFR2Q9Y5X5 522 aa4.67□□□□□ -1.66
SKP1-209ENST00000522552 TSPY2A6NKD2 308 aa4.67□□□□□ -1.66
SKP1-209ENST00000522552 FFAR2O15552 330 aa4.67□□□□□ -1.66
SKP1-209ENST00000522552 FRS3O43559 492 aa4.67□□□□□ -1.66
SKP1-209ENST00000522552 AHCYL1O43865 530 aa4.67□□□□□ -1.66
SKP1-209ENST00000522552 KDM1AO60341 852 aa4.67□□□□□ -1.66
SKP1-209ENST00000522552 MSCO60682 206 aa4.67□□□□□ -1.66
SKP1-209ENST00000522552 TMEM127O75204 238 aa4.67□□□□□ -1.66
SKP1-209ENST00000522552 VAMP4O75379 141 aa4.67□□□□□ -1.66
SKP1-209ENST00000522552 FGF18O76093 207 aa4.67□□□□□ -1.66
SKP1-209ENST00000522552 CTSBP07858 339 aa4.67□□□□□ -1.66
SKP1-209ENST00000522552 HNRNPCP07910 306 aaKnown RBP eCLIP4.67□□□□□ -1.66
SKP1-209ENST00000522552 TSPY3P0CV98 308 aa4.67□□□□□ -1.66
SKP1-209ENST00000522552 TSPY8P0CW00 308 aa4.67□□□□□ -1.66
SKP1-209ENST00000522552 MYF5P13349 255 aa4.67□□□□□ -1.66
SKP1-209ENST00000522552 TSHRP16473 764 aa4.67□□□□□ -1.66
SKP1-209ENST00000522552 SLC9A1P19634 815 aa4.67□□□□□ -1.66
SKP1-209ENST00000522552 MAOBP27338 520 aa4.67□□□□□ -1.66
SKP1-209ENST00000522552 LIFRP42702 1097 aa4.67□□□□□ -1.66
SKP1-209ENST00000522552 TUBP50607 506 aa4.67□□□□□ -1.66
SKP1-209ENST00000522552 DCAF7P61962 342 aa4.67□□□□□ -1.66
SKP1-209ENST00000522552 TSPY1Q01534 308 aa4.67□□□□□ -1.66
SKP1-209ENST00000522552 SCRN1Q12765 414 aa4.67□□□□□ -1.66
SKP1-209ENST00000522552 PDE3AQ14432 1141 aa4.67□□□□□ -1.66
SKP1-209ENST00000522552 POU4F3Q15319 338 aa4.67□□□□□ -1.66
SKP1-209ENST00000522552 SLC14A2Q15849 920 aa4.67□□□□□ -1.66
SKP1-209ENST00000522552 NKG7Q16617 165 aa4.67□□□□□ -1.66
SKP1-209ENST00000522552 KIF4BQ2VIQ3 1234 aa4.67□□□□□ -1.66
SKP1-209ENST00000522552 NOL9Q5SY16 702 aaKnown RBP4.67□□□□□ -1.66
SKP1-209ENST00000522552 DSTYKQ6XUX3 929 aa4.67□□□□□ -1.66
SKP1-209ENST00000522552 ENOSF1Q7L5Y1 443 aa4.67□□□□□ -1.66
SKP1-209ENST00000522552 OTOP1Q7RTM1 612 aa4.67□□□□□ -1.66
SKP1-209ENST00000522552 LIX1LQ8IVB5 337 aa4.67□□□□□ -1.66
SKP1-209ENST00000522552 CYB5D2Q8WUJ1 264 aa4.67□□□□□ -1.66
SKP1-209ENST00000522552 COA7Q96BR5 231 aa4.67□□□□□ -1.66
SKP1-209ENST00000522552 NT5C1BQ96P26 610 aa4.67□□□□□ -1.66
SKP1-209ENST00000522552 KRTAP4-12Q9BQ66 201 aa4.67□□□□□ -1.66
SKP1-209ENST00000522552 ALG1Q9BT22 464 aa4.67□□□□□ -1.66
SKP1-209ENST00000522552 FRMD4AQ9P2Q2 1039 aaPredicted RBP4.67□□□□□ -1.66
SKP1-209ENST00000522552 NFKBIL1Q9UBC1 381 aaPredicted RBP4.67□□□□□ -1.66
SKP1-209ENST00000522552 GPR34Q9UPC5 381 aa4.67□□□□□ -1.66
SKP1-209ENST00000522552 JAG2Q9Y219 1238 aa4.67□□□□□ -1.66
Retrieved 100 of 20,778 RNA–protein pairs in 80.8 ms