RNA–Protein interactions for RNA: ENST00000522117.5

SPIDR-217, Transcript of scaffold protein involved in DNA repair, humanhuman

TSL 2

Gene SPIDR, Length 2,745 nt, Biotype nonsense mediated decay, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SPIDR-217ENST00000522117 IFNAR2P48551 515 aa13.06□□□□□ -0.32
SPIDR-217ENST00000522117 RNASE9P60153 205 aaKnown RBP13.06□□□□□ -0.32
SPIDR-217ENST00000522117 ZNF554Q86TJ5 538 aa13.06□□□□□ -0.32
SPIDR-217ENST00000522117 USP38Q8NB14 1042 aa13.06□□□□□ -0.32
SPIDR-217ENST00000522117 RNF25Q96BH1 459 aaPredicted RBP13.06□□□□□ -0.32
SPIDR-217ENST00000522117 LENG1Q96BZ8 264 aaPredicted RBP13.06□□□□□ -0.32
SPIDR-217ENST00000522117 ZNF653Q96CK0 615 aa13.06□□□□□ -0.32
SPIDR-217ENST00000522117 PUS3Q9BZE2 481 aaKnown RBP13.06□□□□□ -0.32
SPIDR-217ENST00000522117 DPH5Q9H2P9 285 aa13.06□□□□□ -0.32
SPIDR-217ENST00000522117 PRKAG3Q9UGI9 489 aa13.06□□□□□ -0.32
SPIDR-217ENST00000522117 TMEM94Q12767 1356 aa13.05□□□□□ -0.32
SPIDR-217ENST00000522117 BTBD18B2RXH4 712 aa13.05□□□□□ -0.32
SPIDR-217ENST00000522117 O00370 1275 aa13.05□□□□□ -0.32
SPIDR-217ENST00000522117 MYL6BP14649 208 aa13.05□□□□□ -0.32
SPIDR-217ENST00000522117 TRIM21P19474 475 aaKnown RBP13.05□□□□□ -0.32
SPIDR-217ENST00000522117 KIF11P52732 1056 aa13.05□□□□□ -0.32
SPIDR-217ENST00000522117 PKN1Q16512 942 aa13.05□□□□□ -0.32
SPIDR-217ENST00000522117 RSPH1Q8WYR4 309 aa13.05□□□□□ -0.32
SPIDR-217ENST00000522117 STAMQ92783 540 aa13.05□□□□□ -0.32
SPIDR-217ENST00000522117 DHTKD1Q96HY7 919 aaPredicted RBP13.05□□□□□ -0.32
SPIDR-217ENST00000522117 CLMNQ96JQ2 1002 aa13.05□□□□□ -0.32
SPIDR-217ENST00000522117 RMDN2Q96LZ7 410 aa13.05□□□□□ -0.32
SPIDR-217ENST00000522117 AGBL1Q96MI9 1066 aa13.05□□□□□ -0.32
SPIDR-217ENST00000522117 POLR3CQ9BUI4 534 aaPredicted RBP13.05□□□□□ -0.32
SPIDR-217ENST00000522117 PRPF3O43395 683 aaKnown RBP13.05□□□□□ -0.32
SPIDR-217ENST00000522117 BUB1O43683 1085 aa13.05□□□□□ -0.32
SPIDR-217ENST00000522117 YY1P25490 414 aa13.05□□□□□ -0.32
SPIDR-217ENST00000522117 VHLP40337 213 aa13.05□□□□□ -0.32
SPIDR-217ENST00000522117 DNA2P51530 1060 aa13.05□□□□□ -0.32
SPIDR-217ENST00000522117 MGAT5Q09328 741 aa13.05□□□□□ -0.32
SPIDR-217ENST00000522117 SH2D4BQ5SQS7 431 aa13.05□□□□□ -0.32
SPIDR-217ENST00000522117 DAB2IPQ5VWQ8 1189 aa13.05□□□□□ -0.32
SPIDR-217ENST00000522117 TBC1D9BQ66K14 1250 aa13.05□□□□□ -0.32
SPIDR-217ENST00000522117 SH3TC2Q8TF17 1288 aa13.05□□□□□ -0.32
SPIDR-217ENST00000522117 WDR60Q8WVS4 1066 aa13.05□□□□□ -0.32
SPIDR-217ENST00000522117 LRMDAQ9H2I8 198 aa13.05□□□□□ -0.32
SPIDR-217ENST00000522117 ARL2BPQ9Y2Y0 163 aa13.05□□□□□ -0.32
SPIDR-217ENST00000522117 H7C1D1 291 aa13.04□□□□□ -0.32
SPIDR-217ENST00000522117 ANXA1P04083 346 aa13.04□□□□□ -0.32
SPIDR-217ENST00000522117 HNRNPCP07910 306 aaKnown RBP eCLIP13.04□□□□□ -0.32
SPIDR-217ENST00000522117 ZFXP17010 805 aaPredicted RBP13.04□□□□□ -0.32
SPIDR-217ENST00000522117 IARSP41252 1262 aaKnown RBP13.04□□□□□ -0.32
SPIDR-217ENST00000522117 DNM2P50570 870 aa13.04□□□□□ -0.32
SPIDR-217ENST00000522117 HPCAP84074 193 aa13.04□□□□□ -0.32
SPIDR-217ENST00000522117 OCRLQ01968 901 aa13.04□□□□□ -0.32
SPIDR-217ENST00000522117 KCTD19Q17RG1 926 aaPredicted RBP13.04□□□□□ -0.32
SPIDR-217ENST00000522117 TYW1BQ6NUM6 668 aa13.04□□□□□ -0.32
SPIDR-217ENST00000522117 WDR66Q8TBY9 1149 aa13.04□□□□□ -0.32
SPIDR-217ENST00000522117 NRG4Q8WWG1 115 aa13.04□□□□□ -0.32
SPIDR-217ENST00000522117 FGFR1OP2Q9NVK5 253 aa13.04□□□□□ -0.32
SPIDR-217ENST00000522117 NWD2Q9ULI1 1742 aa13.04□□□□□ -0.32
SPIDR-217ENST00000522117 TBC1D30Q9Y2I9 924 aa13.04□□□□□ -0.32
SPIDR-217ENST00000522117 XDHP47989 1333 aa13.04□□□□□ -0.32
SPIDR-217ENST00000522117 CPDO75976 1380 aa13.04□□□□□ -0.32
SPIDR-217ENST00000522117 TRIM49BA6NDI0 452 aa13.04□□□□□ -0.32
SPIDR-217ENST00000522117 RANBP6O60518 1105 aaKnown RBP13.04□□□□□ -0.32
SPIDR-217ENST00000522117 SKIP12755 728 aa13.04□□□□□ -0.32
SPIDR-217ENST00000522117 IDO1P14902 403 aa13.04□□□□□ -0.32
SPIDR-217ENST00000522117 STIP1P31948 543 aaKnown RBP13.04□□□□□ -0.32
SPIDR-217ENST00000522117 HOXD12P35452 270 aa13.04□□□□□ -0.32
SPIDR-217ENST00000522117 EIF4A3P38919 411 aaKnown RBP13.04□□□□□ -0.32
SPIDR-217ENST00000522117 EIF3BP55884 814 aaKnown RBP13.04□□□□□ -0.32
SPIDR-217ENST00000522117 RTP1P59025 263 aa13.04□□□□□ -0.32
SPIDR-217ENST00000522117 IFI35P80217 286 aaPredicted RBP13.04□□□□□ -0.32
SPIDR-217ENST00000522117 ADCY1Q08828 1119 aa13.04□□□□□ -0.32
SPIDR-217ENST00000522117 LIN52Q52LA3 116 aa13.04□□□□□ -0.32
SPIDR-217ENST00000522117 WASHC2DQ5SRD0 308 aa13.04□□□□□ -0.32
SPIDR-217ENST00000522117 NOX5Q96PH1 765 aa13.04□□□□□ -0.32
SPIDR-217ENST00000522117 TXLNGYQ9BZA5 131 aa13.04□□□□□ -0.32
SPIDR-217ENST00000522117 BLZF1Q9H2G9 400 aa13.04□□□□□ -0.32
SPIDR-217ENST00000522117 EPB41L4BQ9H329 900 aa13.04□□□□□ -0.32
SPIDR-217ENST00000522117 USP20Q9Y2K6 914 aa13.04□□□□□ -0.32
SPIDR-217ENST00000522117 DAAM1Q9Y4D1 1078 aa13.04□□□□□ -0.32
SPIDR-217ENST00000522117 USH1CQ9Y6N9 552 aa13.04□□□□□ -0.32
SPIDR-217ENST00000522117 LMTK3Q96Q04 1460 aa13.04□□□□□ -0.32
SPIDR-217ENST00000522117 MAST3O60307 1309 aa13.04□□□□□ -0.32
SPIDR-217ENST00000522117 ECE2O60344 883 aa13.04□□□□□ -0.32
SPIDR-217ENST00000522117 RXRAP19793 462 aa13.04□□□□□ -0.32
SPIDR-217ENST00000522117 HNRNPH3P31942 346 aaKnown RBP13.04□□□□□ -0.32
SPIDR-217ENST00000522117 HAND2P61296 217 aa13.04□□□□□ -0.32
SPIDR-217ENST00000522117 GSTM4Q03013 218 aa13.04□□□□□ -0.32
SPIDR-217ENST00000522117 TRIM29Q14134 588 aa13.04□□□□□ -0.32
SPIDR-217ENST00000522117 CNGA2Q16280 664 aa13.04□□□□□ -0.32
SPIDR-217ENST00000522117 CWF19L2Q2TBE0 894 aaKnown RBP13.04□□□□□ -0.32
SPIDR-217ENST00000522117 RC3H1Q5TC82 1133 aaKnown RBP13.04□□□□□ -0.32
SPIDR-217ENST00000522117 TCERG1LQ5VWI1 586 aa13.04□□□□□ -0.32
SPIDR-217ENST00000522117 ZC3H18Q86VM9 953 aaKnown RBP13.04□□□□□ -0.32
SPIDR-217ENST00000522117 SAMD3Q8N6K7 520 aa13.04□□□□□ -0.32
SPIDR-217ENST00000522117 PGM2Q96G03 612 aa13.04□□□□□ -0.32
SPIDR-217ENST00000522117 DDX50Q9BQ39 737 aaKnown RBP13.04□□□□□ -0.32
SPIDR-217ENST00000522117 MKS1Q9NXB0 559 aa13.04□□□□□ -0.32
SPIDR-217ENST00000522117 ENTPD5O75356 428 aa13.03□□□□□ -0.32
SPIDR-217ENST00000522117 EEF1GP26641 437 aaKnown RBP13.03□□□□□ -0.32
SPIDR-217ENST00000522117 MAGEA1P43355 309 aa13.03□□□□□ -0.32
SPIDR-217ENST00000522117 CD97P48960 835 aa13.03□□□□□ -0.32
SPIDR-217ENST00000522117 TTLL12Q14166 644 aaPredicted RBP13.03□□□□□ -0.32
SPIDR-217ENST00000522117 NTRK3Q16288 839 aa13.03□□□□□ -0.32
SPIDR-217ENST00000522117 TNNI3KQ59H18 835 aa13.03□□□□□ -0.32
SPIDR-217ENST00000522117 AGGF1Q8N302 714 aaeCLIP13.03□□□□□ -0.322e-6■■□□□ 12.5
SPIDR-217ENST00000522117 ATP11CQ8NB49 1132 aa13.03□□□□□ -0.32
Retrieved 100 of 20,778 RNA–protein pairs in 64.7 ms