RNA–Protein interactions for RNA: ENST00000517378.1

CDH12-203, Transcript of cadherin 12, humanhuman

TSL 1 (best)

Gene CDH12, Length 2,843 nt, Biotype retained intron.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CDH12-203ENST00000517378 ARMCX3Q9UH62 379 aaPredicted RBP7.3□□□□□ -1.24
CDH12-203ENST00000517378 NAGPAQ9UK23 515 aa7.3□□□□□ -1.24
CDH12-203ENST00000517378 STXBP5LQ9Y2K9 1186 aa7.3□□□□□ -1.24
CDH12-203ENST00000517378 ASTN1O14525 1302 aa7.3□□□□□ -1.24
CDH12-203ENST00000517378 ZSCAN5CA6NGD5 496 aaPredicted RBP7.3□□□□□ -1.24
CDH12-203ENST00000517378 HMGB1P1B2RPK0 211 aaPredicted RBP7.3□□□□□ -1.24
CDH12-203ENST00000517378 EBAG9O00559 213 aa7.3□□□□□ -1.24
CDH12-203ENST00000517378 MARCH6O60337 910 aa7.3□□□□□ -1.24
CDH12-203ENST00000517378 SSBP05455 408 aaKnown RBP eCLIP7.3□□□□□ -1.24
CDH12-203ENST00000517378 HLA-DOAP06340 250 aa7.3□□□□□ -1.24
CDH12-203ENST00000517378 SREBF1P36956 1147 aa7.3□□□□□ -1.24
CDH12-203ENST00000517378 CCT5P48643 541 aa7.3□□□□□ -1.24
CDH12-203ENST00000517378 ARHGAP4P98171 946 aa7.3□□□□□ -1.24
CDH12-203ENST00000517378 SLC15A2Q16348 729 aa7.3□□□□□ -1.24
CDH12-203ENST00000517378 TTC31Q49AM3 519 aaPredicted RBP7.3□□□□□ -1.24
CDH12-203ENST00000517378 CFAP58Q5T655 872 aa7.3□□□□□ -1.24
CDH12-203ENST00000517378 KCTD1Q719H9 257 aa7.3□□□□□ -1.24
CDH12-203ENST00000517378 PACS2Q86VP3 889 aa7.3□□□□□ -1.24
CDH12-203ENST00000517378 GPIHBP1Q8IV16 184 aa7.3□□□□□ -1.24
CDH12-203ENST00000517378 RBM46Q8TBY0 533 aaKnown RBP7.3□□□□□ -1.24
CDH12-203ENST00000517378 SEC14L1Q92503 715 aa7.3□□□□□ -1.24
CDH12-203ENST00000517378 BORCS6Q96GS4 357 aa7.3□□□□□ -1.24
CDH12-203ENST00000517378 FAM20AQ96MK3 541 aa7.3□□□□□ -1.24
CDH12-203ENST00000517378 KRT12Q99456 494 aa7.3□□□□□ -1.24
CDH12-203ENST00000517378 HINFPQ9BQA5 517 aa7.3□□□□□ -1.24
CDH12-203ENST00000517378 REEP2Q9BRK0 252 aa7.3□□□□□ -1.24
CDH12-203ENST00000517378 DNAJC18Q9H819 358 aa7.3□□□□□ -1.24
CDH12-203ENST00000517378 OLFML3Q9NRN5 406 aa7.3□□□□□ -1.24
CDH12-203ENST00000517378 PCDHA1Q9Y5I3 950 aa7.3□□□□□ -1.24
CDH12-203ENST00000517378 COL11A2P13942 1736 aaPredicted RBP7.3□□□□□ -1.24
CDH12-203ENST00000517378 RPL17-C18orf32A0A0A6YYL6 228 aaKnown RBP7.29□□□□□ -1.24
CDH12-203ENST00000517378 USP17L15C9J2P7 530 aa7.29□□□□□ -1.24
CDH12-203ENST00000517378 USP17L13C9JLJ4 530 aa7.29□□□□□ -1.24
CDH12-203ENST00000517378 USP17L11C9JVI0 530 aa7.29□□□□□ -1.24
CDH12-203ENST00000517378 USP17L18D6R9N7 530 aa7.29□□□□□ -1.24
CDH12-203ENST00000517378 USP17L22D6RA61 530 aa7.29□□□□□ -1.24
CDH12-203ENST00000517378 USP17L17D6RBQ6 530 aa7.29□□□□□ -1.24
CDH12-203ENST00000517378 USP17L19D6RCP7 530 aa7.29□□□□□ -1.24
CDH12-203ENST00000517378 USP17L20D6RJB6 530 aa7.29□□□□□ -1.24
CDH12-203ENST00000517378 CCDC188H7C350 402 aa7.29□□□□□ -1.24
CDH12-203ENST00000517378 FLOT1O75955 427 aa7.29□□□□□ -1.24
CDH12-203ENST00000517378 KRT14P02533 472 aa7.29□□□□□ -1.24
CDH12-203ENST00000517378 XRCC5P13010 732 aaKnown RBP7.29□□□□□ -1.24
CDH12-203ENST00000517378 STAT3P40763 770 aa7.29□□□□□ -1.24
CDH12-203ENST00000517378 USP17L24Q0WX57 530 aa7.29□□□□□ -1.24
CDH12-203ENST00000517378 RPS6KA1Q15418 735 aa7.29□□□□□ -1.24
CDH12-203ENST00000517378 EXOC3L4Q17RC7 722 aa7.29□□□□□ -1.24
CDH12-203ENST00000517378 APOBEC3HQ6NTF7 200 aaKnown RBP7.29□□□□□ -1.24
CDH12-203ENST00000517378 CDC42EP5Q6NZY7 148 aa7.29□□□□□ -1.24
CDH12-203ENST00000517378 USP17L6PQ6QN14 398 aa7.29□□□□□ -1.24
CDH12-203ENST00000517378 SFR1Q86XK3 245 aa7.29□□□□□ -1.24
CDH12-203ENST00000517378 TPCN2Q8NHX9 752 aa7.29□□□□□ -1.24
CDH12-203ENST00000517378 BBXQ8WY36 941 aaPredicted RBP7.29□□□□□ -1.24
CDH12-203ENST00000517378 TAF4BQ92750 862 aa7.29□□□□□ -1.24
CDH12-203ENST00000517378 SLC35C1Q96A29 364 aa7.29□□□□□ -1.24
CDH12-203ENST00000517378 ATP6V1G3Q96LB4 118 aa7.29□□□□□ -1.24
CDH12-203ENST00000517378 HNRNPUL1Q9BUJ2 856 aaKnown RBP eCLIP7.29□□□□□ -1.24
CDH12-203ENST00000517378 SUCLA2Q9P2R7 463 aaPredicted RBP7.29□□□□□ -1.24
CDH12-203ENST00000517378 VAV3Q9UKW4 847 aa7.29□□□□□ -1.24
CDH12-203ENST00000517378 TTC7AQ9ULT0 858 aaPredicted RBP7.29□□□□□ -1.24
CDH12-203ENST00000517378 PACSIN2Q9UNF0 486 aaPredicted RBP7.29□□□□□ -1.24
CDH12-203ENST00000517378 DAAM1Q9Y4D1 1078 aa7.29□□□□□ -1.24
CDH12-203ENST00000517378 NCANO14594 1321 aa7.29□□□□□ -1.24
CDH12-203ENST00000517378 ESYT3A0FGR9 886 aa7.29□□□□□ -1.24
CDH12-203ENST00000517378 H0YGN5 161 aa7.29□□□□□ -1.24
CDH12-203ENST00000517378 PGRMC1O00264 195 aaKnown RBP7.29□□□□□ -1.24
CDH12-203ENST00000517378 PPEF1O14829 653 aaPredicted RBP7.29□□□□□ -1.24
CDH12-203ENST00000517378 EIF3DO15371 548 aaKnown RBP eCLIP7.29□□□□□ -1.24
CDH12-203ENST00000517378 AKAP3O75969 853 aa7.29□□□□□ -1.24
CDH12-203ENST00000517378 FOSP01100 380 aaPredicted RBP7.29□□□□□ -1.24
CDH12-203ENST00000517378 CYP3A4P08684 503 aa7.29□□□□□ -1.24
CDH12-203ENST00000517378 ACTN1P12814 892 aa7.29□□□□□ -1.24
CDH12-203ENST00000517378 SLC9A1P19634 815 aa7.29□□□□□ -1.24
CDH12-203ENST00000517378 ERVK-9P63128 1117 aa7.29□□□□□ -1.24
CDH12-203ENST00000517378 CACNB1Q02641 598 aaPredicted RBP7.29□□□□□ -1.24
CDH12-203ENST00000517378 ITGB3BPQ13352 177 aaPredicted RBP7.29□□□□□ -1.24
CDH12-203ENST00000517378 YTHDF3Q7Z739 585 aaKnown RBP7.29□□□□□ -1.24
CDH12-203ENST00000517378 GMCL1P1Q8NEA9 526 aa7.29□□□□□ -1.24
CDH12-203ENST00000517378 ZFP91Q96JP5 570 aaPredicted RBP7.29□□□□□ -1.24
CDH12-203ENST00000517378 P2RX7Q99572 595 aaKnown RBP7.29□□□□□ -1.24
CDH12-203ENST00000517378 BUD13Q9BRD0 619 aaKnown RBP eCLIP7.29□□□□□ -1.24
CDH12-203ENST00000517378 POLR3CQ9BUI4 534 aaPredicted RBP7.29□□□□□ -1.24
CDH12-203ENST00000517378 MRIQ9BWK5 157 aa7.29□□□□□ -1.24
CDH12-203ENST00000517378 SLITRK6Q9H5Y7 841 aa7.29□□□□□ -1.24
CDH12-203ENST00000517378 LRRC4BQ9NT99 713 aa7.29□□□□□ -1.24
CDH12-203ENST00000517378 USP40Q9NVE5 1235 aa7.29□□□□□ -1.24
CDH12-203ENST00000517378 GGA2Q9UJY4 613 aa7.29□□□□□ -1.24
CDH12-203ENST00000517378 DNM3Q9UQ16 869 aa7.29□□□□□ -1.24
CDH12-203ENST00000517378 NFS1Q9Y697 457 aa7.29□□□□□ -1.24
CDH12-203ENST00000517378 FAM169AQ9Y6X4 670 aa7.29□□□□□ -1.24
CDH12-203ENST00000517378 UBE4BO95155 1302 aa7.29□□□□□ -1.24
CDH12-203ENST00000517378 ZMYM2Q9UBW7 1377 aa7.29□□□□□ -1.24
CDH12-203ENST00000517378 POLRMTO00411 1230 aaKnown RBP7.28□□□□□ -1.24
CDH12-203ENST00000517378 NR3C1P04150 777 aa7.28□□□□□ -1.24
CDH12-203ENST00000517378 NR1D1P20393 614 aa7.28□□□□□ -1.24
CDH12-203ENST00000517378 RPL13P26373 211 aaKnown RBP7.28□□□□□ -1.24
CDH12-203ENST00000517378 LSP1P33241 339 aa7.28□□□□□ -1.24
CDH12-203ENST00000517378 SPDYCQ5MJ68 293 aa7.28□□□□□ -1.24
CDH12-203ENST00000517378 ALKBH5Q6P6C2 394 aaKnown RBP7.28□□□□□ -1.24
CDH12-203ENST00000517378 B4GALNT4Q76KP1 1039 aa7.28□□□□□ -1.24
Retrieved 100 of 20,778 RNA–protein pairs in 106 ms