RNA–Protein interactions for RNA: ENST00000510569.5

NUP54-209, Transcript of nucleoporin 54, humanhuman

TSL 5

Gene NUP54, Length 494 nt, Biotype processed transcript, Subcellular localisation Cytoplasm, Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
NUP54-209ENST00000510569 CXXC5Q7LFL8 322 aaKnown RBP7.87□□□□□ -1.15
NUP54-209ENST00000510569 ZC3H7AQ8IWR0 971 aaKnown RBP7.87□□□□□ -1.15
NUP54-209ENST00000510569 GNRHR2Q96P88 292 aa7.87□□□□□ -1.15
NUP54-209ENST00000510569 SLC52A2Q9HAB3 445 aa7.87□□□□□ -1.15
NUP54-209ENST00000510569 INCENPQ9NQS7 918 aa7.87□□□□□ -1.15
NUP54-209ENST00000510569 ESYT3A0FGR9 886 aa7.86□□□□□ -1.15
NUP54-209ENST00000510569 AKAP8O43823 692 aaKnown RBP7.86□□□□□ -1.15
NUP54-209ENST00000510569 EFCAB14O75071 495 aa7.86□□□□□ -1.15
NUP54-209ENST00000510569 IL13RA1P78552 427 aa7.86□□□□□ -1.15
NUP54-209ENST00000510569 NOSTRINQ8IVI9 506 aa7.86□□□□□ -1.15
NUP54-209ENST00000510569 NEIL1Q96FI4 390 aaPredicted RBP7.86□□□□□ -1.15
NUP54-209ENST00000510569 GALNT8Q9NY28 637 aa7.86□□□□□ -1.15
NUP54-209ENST00000510569 FBXO10Q9UK96 956 aa7.86□□□□□ -1.15
NUP54-209ENST00000510569 TESMINQ9Y4I5 508 aa7.86□□□□□ -1.15
NUP54-209ENST00000510569 LOC101059915A0A1B0GWI6 518 aaPredicted RBP7.85□□□□□ -1.15
NUP54-209ENST00000510569 PRAMEF25A6NGN4 478 aa7.85□□□□□ -1.15
NUP54-209ENST00000510569 MUSKO15146 869 aa7.85□□□□□ -1.15
NUP54-209ENST00000510569 FOXS1O43638 330 aa7.85□□□□□ -1.15
NUP54-209ENST00000510569 MPIG6BO95866 241 aa7.85□□□□□ -1.15
NUP54-209ENST00000510569 TACR2P21452 398 aa7.85□□□□□ -1.15
NUP54-209ENST00000510569 MC4RP32245 332 aa7.85□□□□□ -1.15
NUP54-209ENST00000510569 SEC23AQ15436 765 aa7.85□□□□□ -1.15
NUP54-209ENST00000510569 ZNF568Q3ZCX4 644 aa7.85□□□□□ -1.15
NUP54-209ENST00000510569 CRIP3Q6Q6R5 217 aa7.85□□□□□ -1.15
NUP54-209ENST00000510569 EP400NLQ6ZTU2 488 aa7.85□□□□□ -1.15
NUP54-209ENST00000510569 PALM2Q8IXS6 379 aa7.85□□□□□ -1.15
NUP54-209ENST00000510569 WNK4Q96J92 1243 aa7.85□□□□□ -1.15
NUP54-209ENST00000510569 LRRC37BQ96QE4 947 aa7.85□□□□□ -1.15
NUP54-209ENST00000510569 CELF4Q9BZC1 486 aaKnown RBP7.85□□□□□ -1.15
NUP54-209ENST00000510569 ZDHHC5Q9C0B5 715 aa7.85□□□□□ -1.15
NUP54-209ENST00000510569 NDOR1Q9UHB4 597 aa7.85□□□□□ -1.15
NUP54-209ENST00000510569 DNM2P50570 870 aa7.84□□□□□ -1.15
NUP54-209ENST00000510569 WDR72Q3MJ13 1102 aa7.84□□□□□ -1.15
NUP54-209ENST00000510569 ZMAT1Q5H9K5 638 aa7.84□□□□□ -1.15
NUP54-209ENST00000510569 MKL1Q969V6 931 aa7.84□□□□□ -1.15
NUP54-209ENST00000510569 SCYL1Q96KG9 808 aa7.84□□□□□ -1.15
NUP54-209ENST00000510569 KCNK3O14649 394 aa7.83□□□□□ -1.16
NUP54-209ENST00000510569 KCNQ2O43526 872 aa7.83□□□□□ -1.16
NUP54-209ENST00000510569 C6P13671 934 aa7.83□□□□□ -1.16
NUP54-209ENST00000510569 RAC3P60763 192 aa7.83□□□□□ -1.16
NUP54-209ENST00000510569 RNF151Q2KHN1 245 aa7.83□□□□□ -1.16
NUP54-209ENST00000510569 Q8N1X5 172 aa7.83□□□□□ -1.16
NUP54-209ENST00000510569 CISD2Q8N5K1 135 aaKnown RBP7.83□□□□□ -1.16
NUP54-209ENST00000510569 BTBD2Q9BX70 525 aa7.83□□□□□ -1.16
NUP54-209ENST00000510569 AMNQ9BXJ7 453 aa7.83□□□□□ -1.16
NUP54-209ENST00000510569 PODXL2Q9NZ53 605 aa7.83□□□□□ -1.16
NUP54-209ENST00000510569 OAZ3Q9UMX2 235 aa7.83□□□□□ -1.16
NUP54-209ENST00000510569 ZFR2Q9UPR6 939 aaKnown RBP7.83□□□□□ -1.16
NUP54-209ENST00000510569 RASGRP1O95267 797 aa7.82□□□□□ -1.16
NUP54-209ENST00000510569 NFYCQ13952 458 aa7.82□□□□□ -1.16
NUP54-209ENST00000510569 EIF4HQ15056 248 aaKnown RBP7.82□□□□□ -1.16
NUP54-209ENST00000510569 TM4SF20Q53R12 229 aa7.82□□□□□ -1.16
NUP54-209ENST00000510569 SPDYAQ5MJ70 313 aa7.82□□□□□ -1.16
NUP54-209ENST00000510569 KANK2Q63ZY3 851 aa7.82□□□□□ -1.16
NUP54-209ENST00000510569 FSTL4Q6MZW2 842 aa7.82□□□□□ -1.16
NUP54-209ENST00000510569 TAX1BP1Q86VP1 789 aa7.82□□□□□ -1.16
NUP54-209ENST00000510569 GIMAP8Q8ND71 665 aaPredicted RBP7.82□□□□□ -1.16
NUP54-209ENST00000510569 SLC7A14Q8TBB6 771 aa7.82□□□□□ -1.16
NUP54-209ENST00000510569 SCLYQ96I15 445 aa7.82□□□□□ -1.16
NUP54-209ENST00000510569 DNAJC7Q99615 494 aa7.82□□□□□ -1.16
NUP54-209ENST00000510569 ZNF747Q9BV97 191 aa7.82□□□□□ -1.16
NUP54-209ENST00000510569 MSL2Q9HCI7 577 aa7.82□□□□□ -1.16
NUP54-209ENST00000510569 SFMBT1Q9UHJ3 866 aa7.82□□□□□ -1.16
NUP54-209ENST00000510569 CCDC163A0A0D9SF12 145 aa7.81□□□□□ -1.16
NUP54-209ENST00000510569 MMEP08473 750 aa7.81□□□□□ -1.16
NUP54-209ENST00000510569 HS1BP3Q53T59 392 aa7.81□□□□□ -1.16
NUP54-209ENST00000510569 SLC16A11Q8NCK7 471 aa7.81□□□□□ -1.16
NUP54-209ENST00000510569 ZSWIM2Q8NEG5 633 aa7.81□□□□□ -1.16
NUP54-209ENST00000510569 MAGEB10Q96LZ2 347 aaPredicted RBP7.81□□□□□ -1.16
NUP54-209ENST00000510569 MRPL4Q9BYD3 311 aaKnown RBP7.81□□□□□ -1.16
NUP54-209ENST00000510569 KCNH7Q9NS40 1196 aa7.81□□□□□ -1.16
NUP54-209ENST00000510569 SRRDQ9UH36 339 aa7.81□□□□□ -1.16
NUP54-209ENST00000510569 COQ6Q9Y2Z9 468 aa7.81□□□□□ -1.16
NUP54-209ENST00000510569 SLC30A1Q9Y6M5 507 aa7.81□□□□□ -1.16
NUP54-209ENST00000510569 MATN2O00339 956 aa7.8□□□□□ -1.16
NUP54-209ENST00000510569 RAD17O75943 681 aa7.8□□□□□ -1.16
NUP54-209ENST00000510569 HMGCRP04035 888 aa7.8□□□□□ -1.16
NUP54-209ENST00000510569 ECE1P42892 770 aa7.8□□□□□ -1.16
NUP54-209ENST00000510569 RRADP55042 308 aa7.8□□□□□ -1.16
NUP54-209ENST00000510569 DUSP8Q13202 625 aa7.8□□□□□ -1.16
NUP54-209ENST00000510569 SOGA3Q5TF21 947 aa7.8□□□□□ -1.16
NUP54-209ENST00000510569 TMEM200BQ69YZ2 307 aa7.8□□□□□ -1.16
NUP54-209ENST00000510569 OVCH1Q7RTY7 1134 aa7.8□□□□□ -1.16
NUP54-209ENST00000510569 THAP3Q8WTV1 239 aaPredicted RBP7.8□□□□□ -1.16
NUP54-209ENST00000510569 ASB15Q8WXK1 588 aa7.8□□□□□ -1.16
NUP54-209ENST00000510569 DLG3Q92796 817 aa7.8□□□□□ -1.16
NUP54-209ENST00000510569 SRPK1Q96SB4 655 aaKnown RBP7.8□□□□□ -1.16
NUP54-209ENST00000510569 OR10A5Q9H207 317 aa7.8□□□□□ -1.16
NUP54-209ENST00000510569 B3GALT1Q9Y5Z6 326 aa7.8□□□□□ -1.16
NUP54-209ENST00000510569 ARHGAP6O43182 974 aa7.79□□□□□ -1.16
NUP54-209ENST00000510569 MAFO75444 373 aaPredicted RBP7.79□□□□□ -1.16
NUP54-209ENST00000510569 NPTXRO95502 500 aa7.79□□□□□ -1.16
NUP54-209ENST00000510569 CR2P20023 1033 aa7.79□□□□□ -1.16
NUP54-209ENST00000510569 SDHAP31040 664 aa7.79□□□□□ -1.16
NUP54-209ENST00000510569 ADCY8P40145 1251 aa7.79□□□□□ -1.16
NUP54-209ENST00000510569 AGBL4Q5VU57 503 aa7.79□□□□□ -1.16
NUP54-209ENST00000510569 TRIM68Q6AZZ1 485 aa7.79□□□□□ -1.16
NUP54-209ENST00000510569 LRSAM1Q6UWE0 723 aa7.79□□□□□ -1.16
NUP54-209ENST00000510569 LARP4Q71RC2 724 aaKnown RBP eCLIP7.79□□□□□ -1.16
NUP54-209ENST00000510569 BRAPQ7Z569 592 aa7.79□□□□□ -1.16
Retrieved 100 of 20,778 RNA–protein pairs in 48 ms