RNA–Protein interactions for RNA: ENST00000498107.5

SSBP1-214, Transcript of single stranded DNA binding protein 1, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene SSBP1, Length 636 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SSBP1-214ENST00000498107 TBX21Q9UL17 535 aa17.93■□□□□ 0.46
SSBP1-214ENST00000498107 MKI67P46013 3256 aaKnown RBP17.92■□□□□ 0.46
SSBP1-214ENST00000498107 ZNF862O60290 1169 aa17.92■□□□□ 0.46
SSBP1-214ENST00000498107 RAG1P15918 1043 aa17.92■□□□□ 0.46
SSBP1-214ENST00000498107 ATP4AP20648 1035 aa17.92■□□□□ 0.46
SSBP1-214ENST00000498107 MUTP22033 750 aa17.92■□□□□ 0.46
SSBP1-214ENST00000498107 FOXD4L5Q5VV16 416 aaPredicted RBP17.92■□□□□ 0.46
SSBP1-214ENST00000498107 TAF2Q6P1X5 1199 aa17.92■□□□□ 0.46
SSBP1-214ENST00000498107 OTUD6AQ7L8S5 288 aa17.92■□□□□ 0.46
SSBP1-214ENST00000498107 IGSF22Q8N9C0 903 aa17.92■□□□□ 0.46
SSBP1-214ENST00000498107 PPP1R13LQ8WUF5 828 aa17.92■□□□□ 0.46
SSBP1-214ENST00000498107 FOXD4L4Q8WXT5 416 aaPredicted RBP17.92■□□□□ 0.46
SSBP1-214ENST00000498107 DYDC2Q96IM9 177 aa17.92■□□□□ 0.46
SSBP1-214ENST00000498107 HSD17B14Q9BPX1 270 aa17.92■□□□□ 0.46
SSBP1-214ENST00000498107 TUBE1Q9UJT0 475 aa17.92■□□□□ 0.46
SSBP1-214ENST00000498107 CFAP45Q9UL16 551 aa17.92■□□□□ 0.46
SSBP1-214ENST00000498107 PPME1Q9Y570 386 aa17.92■□□□□ 0.46
SSBP1-214ENST00000498107 MORC2Q9Y6X9 1032 aaPredicted RBP17.92■□□□□ 0.46
SSBP1-214ENST00000498107 MBLAC1A4D2B0 266 aaPredicted RBP17.91■□□□□ 0.46
SSBP1-214ENST00000498107 SLITRK3O94933 977 aa17.91■□□□□ 0.46
SSBP1-214ENST00000498107 LYPLA2O95372 231 aa17.91■□□□□ 0.46
SSBP1-214ENST00000498107 IGBP1P78318 339 aa17.91■□□□□ 0.46
SSBP1-214ENST00000498107 ADAM17P78536 824 aa17.91■□□□□ 0.46
SSBP1-214ENST00000498107 PKP1Q13835 747 aa17.91■□□□□ 0.46
SSBP1-214ENST00000498107 UGCGQ16739 394 aa17.91■□□□□ 0.46
SSBP1-214ENST00000498107 KRT79Q5XKE5 535 aa17.91■□□□□ 0.46
SSBP1-214ENST00000498107 FAM173BQ6P4H8 233 aa17.91■□□□□ 0.46
SSBP1-214ENST00000498107 SERINC5Q86VE9 423 aa17.91■□□□□ 0.46
SSBP1-214ENST00000498107 TPH2Q8IWU9 490 aa17.91■□□□□ 0.46
SSBP1-214ENST00000498107 RETREG2Q8NC44 543 aa17.91■□□□□ 0.46
SSBP1-214ENST00000498107 AK8Q96MA6 479 aa17.91■□□□□ 0.46
SSBP1-214ENST00000498107 LBHD1Q9BQE6 289 aaPredicted RBP17.91■□□□□ 0.46
SSBP1-214ENST00000498107 POLR3CQ9BUI4 534 aaPredicted RBP17.91■□□□□ 0.46
SSBP1-214ENST00000498107 NIFKQ9BYG3 293 aaKnown RBP17.91■□□□□ 0.46
SSBP1-214ENST00000498107 HIPK3Q9H422 1215 aa17.91■□□□□ 0.46
SSBP1-214ENST00000498107 RGL1Q9NZL6 768 aa17.91■□□□□ 0.46
SSBP1-214ENST00000498107 SEPT9Q9UHD8 586 aaPredicted RBP17.91■□□□□ 0.46
SSBP1-214ENST00000498107 ZMYND8Q9ULU4 1186 aaPredicted RBP17.91■□□□□ 0.46
SSBP1-214ENST00000498107 CLIC4Q9Y696 253 aa17.91■□□□□ 0.46
SSBP1-214ENST00000498107 MYH15Q9Y2K3 1946 aa17.91■□□□□ 0.46
SSBP1-214ENST00000498107 TRIP12Q14669 1992 aaPredicted RBP17.91■□□□□ 0.46
SSBP1-214ENST00000498107 CEP290O15078 2479 aa17.91■□□□□ 0.46
SSBP1-214ENST00000498107 VWA3AA6NCI4 1184 aa17.9■□□□□ 0.46
SSBP1-214ENST00000498107 DDX11L8A8MPP1 907 aa17.9■□□□□ 0.46
SSBP1-214ENST00000498107 PITPNM1O00562 1244 aa17.9■□□□□ 0.46
SSBP1-214ENST00000498107 MAGEB2O15479 319 aa17.9■□□□□ 0.46
SSBP1-214ENST00000498107 TREHO43280 583 aa17.9■□□□□ 0.46
SSBP1-214ENST00000498107 CAND2O75155 1236 aa17.9■□□□□ 0.46
SSBP1-214ENST00000498107 TIMP1P01033 207 aa17.9■□□□□ 0.46
SSBP1-214ENST00000498107 CYP2C9P11712 490 aa17.9■□□□□ 0.46
SSBP1-214ENST00000498107 RPA1P27694 616 aa17.9■□□□□ 0.46
SSBP1-214ENST00000498107 NASPP49321 788 aaPredicted RBP17.9■□□□□ 0.46
SSBP1-214ENST00000498107 CYP4A11Q02928 519 aa17.9■□□□□ 0.46
SSBP1-214ENST00000498107 SLC39A14Q15043 492 aa17.9■□□□□ 0.46
SSBP1-214ENST00000498107 STK38Q15208 465 aa17.9■□□□□ 0.46
SSBP1-214ENST00000498107 TRMT1LQ7Z2T5 733 aaKnown RBP17.9■□□□□ 0.46
SSBP1-214ENST00000498107 SH3RF1Q7Z6J0 888 aa17.9■□□□□ 0.46
SSBP1-214ENST00000498107 RSPH3Q86UC2 560 aa17.9■□□□□ 0.46
SSBP1-214ENST00000498107 EXOC8Q8IYI6 725 aa17.9■□□□□ 0.46
SSBP1-214ENST00000498107 USP28Q96RU2 1077 aa17.9■□□□□ 0.46
SSBP1-214ENST00000498107 JPH2Q9BR39 696 aaPredicted RBP17.9■□□□□ 0.46
SSBP1-214ENST00000498107 NOC4LQ9BVI4 516 aaKnown RBP17.9■□□□□ 0.46
SSBP1-214ENST00000498107 DNAH12Q6ZR08 3092 aa17.9■□□□□ 0.46
SSBP1-214ENST00000498107 TRIM43BA6NCK2 446 aa17.89■□□□□ 0.45
SSBP1-214ENST00000498107 SLC26A4O43511 780 aa17.89■□□□□ 0.45
SSBP1-214ENST00000498107 XRCC6P12956 609 aaKnown RBP eCLIP17.89■□□□□ 0.45
SSBP1-214ENST00000498107 SYN1P17600 705 aa17.89■□□□□ 0.45
SSBP1-214ENST00000498107 YWHABP31946 246 aaKnown RBP17.89■□□□□ 0.45
SSBP1-214ENST00000498107 LONP1P36776 959 aaKnown RBP17.89■□□□□ 0.45
SSBP1-214ENST00000498107 CCT6AP40227 531 aaKnown RBP17.89■□□□□ 0.45
SSBP1-214ENST00000498107 ZNF200P98182 395 aaPredicted RBP17.89■□□□□ 0.45
SSBP1-214ENST00000498107 CEBPZQ03701 1054 aaKnown RBP17.89■□□□□ 0.45
SSBP1-214ENST00000498107 RBL2Q08999 1139 aa17.89■□□□□ 0.45
SSBP1-214ENST00000498107 CTTNQ14247 550 aaKnown RBP17.89■□□□□ 0.45
SSBP1-214ENST00000498107 PTPAQ15257 358 aa17.89■□□□□ 0.45
SSBP1-214ENST00000498107 KCTD17Q8N5Z5 321 aa17.89■□□□□ 0.45
SSBP1-214ENST00000498107 TRIM43Q96BQ3 446 aaPredicted RBP17.89■□□□□ 0.45
SSBP1-214ENST00000498107 CCDC43Q96MW1 224 aaKnown RBP17.89■□□□□ 0.45
SSBP1-214ENST00000498107 NACC1Q96RE7 527 aa17.89■□□□□ 0.45
SSBP1-214ENST00000498107 PCDHA2Q9Y5H9 948 aa17.89■□□□□ 0.45
SSBP1-214ENST00000498107 H0YGN5 161 aa17.88■□□□□ 0.45
SSBP1-214ENST00000498107 PARNO95453 639 aaKnown RBP17.88■□□□□ 0.45
SSBP1-214ENST00000498107 YEATS4O95619 227 aa17.88■□□□□ 0.45
SSBP1-214ENST00000498107 KLRC1P26715 233 aa17.88■□□□□ 0.45
SSBP1-214ENST00000498107 TMOD1P28289 359 aa17.88■□□□□ 0.45
SSBP1-214ENST00000498107 TBC1D8BQ0IIM8 1120 aa17.88■□□□□ 0.45
SSBP1-214ENST00000498107 HIC1Q14526 733 aa17.88■□□□□ 0.45
SSBP1-214ENST00000498107 IL17AQ16552 155 aa17.88■□□□□ 0.45
SSBP1-214ENST00000498107 MARCH8Q5T0T0 291 aa17.88■□□□□ 0.45
SSBP1-214ENST00000498107 MTHFD1LQ6UB35 978 aa17.88■□□□□ 0.45
SSBP1-214ENST00000498107 RPAINQ86UA6 219 aa17.88■□□□□ 0.45
SSBP1-214ENST00000498107 CATSPER3Q86XQ3 398 aa17.88■□□□□ 0.45
SSBP1-214ENST00000498107 TMEM199Q8N511 208 aa17.88■□□□□ 0.45
SSBP1-214ENST00000498107 SNX29Q8TEQ0 813 aa17.88■□□□□ 0.45
SSBP1-214ENST00000498107 CTAGE1Q96RT6 745 aa17.88■□□□□ 0.45
SSBP1-214ENST00000498107 PPP1R12CQ9BZL4 782 aa17.88■□□□□ 0.45
SSBP1-214ENST00000498107 ANKEF1Q9NU02 776 aa17.88■□□□□ 0.45
SSBP1-214ENST00000498107 CIZ1Q9ULV3 898 aaPredicted RBP17.88■□□□□ 0.45
SSBP1-214ENST00000498107 KDM3AQ9Y4C1 1321 aa17.88■□□□□ 0.45
SSBP1-214ENST00000498107 SMIM35A0A1B0GVV1 85 aa17.87■□□□□ 0.45
Retrieved 100 of 20,778 RNA–protein pairs in 51.5 ms