RNA–Protein interactions for RNA: ENST00000496296.5

FGFR1-223, Transcript of fibroblast growth factor receptor 1, humanhuman

TSL 1 (best)

Gene FGFR1, Length 1,898 nt, Biotype retained intron, Subcellular localisation Endoplasmic reticulum .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
FGFR1-223ENST00000496296 CDHR1Q96JP9 859 aa23.42■■□□□ 1.34
FGFR1-223ENST00000496296 TUBGCP2Q9BSJ2 902 aa23.42■■□□□ 1.34
FGFR1-223ENST00000496296 DESI2Q9BSY9 194 aa23.42■■□□□ 1.34
FGFR1-223ENST00000496296 RBPJLQ9UBG7 517 aa23.42■■□□□ 1.34
FGFR1-223ENST00000496296 RNF225M0QZC1 329 aaPredicted RBP23.41■■□□□ 1.34
FGFR1-223ENST00000496296 DDX39AO00148 427 aaKnown RBP23.41■■□□□ 1.34
FGFR1-223ENST00000496296 IDEP14735 1019 aa23.41■■□□□ 1.34
FGFR1-223ENST00000496296 CASQ1P31415 396 aa23.41■■□□□ 1.34
FGFR1-223ENST00000496296 ERVK-24P63145 666 aa23.41■■□□□ 1.34
FGFR1-223ENST00000496296 GPBP1Q86WP2 473 aa23.41■■□□□ 1.34
FGFR1-223ENST00000496296 DYDC2Q96IM9 177 aa23.41■■□□□ 1.34
FGFR1-223ENST00000496296 NUP58Q9BVL2 599 aa23.41■■□□□ 1.34
FGFR1-223ENST00000496296 SEMA6BQ9H3T3 888 aa23.41■■□□□ 1.34
FGFR1-223ENST00000496296 RGL1Q9NZL6 768 aa23.41■■□□□ 1.34
FGFR1-223ENST00000496296 CCL15-CCL14A0A0B4J2E2 113 aa23.41■■□□□ 1.34
FGFR1-223ENST00000496296 PEX10O60683 326 aa23.41■■□□□ 1.34
FGFR1-223ENST00000496296 SLITRK3O94933 977 aa23.41■■□□□ 1.34
FGFR1-223ENST00000496296 KRT18P05783 430 aaKnown RBP23.41■■□□□ 1.34
FGFR1-223ENST00000496296 ZBTB48P10074 688 aaPredicted RBP23.41■■□□□ 1.34
FGFR1-223ENST00000496296 ERCC3P19447 782 aa23.41■■□□□ 1.34
FGFR1-223ENST00000496296 KRT9P35527 623 aa23.41■■□□□ 1.34
FGFR1-223ENST00000496296 GNG11P61952 73 aa23.41■■□□□ 1.34
FGFR1-223ENST00000496296 CCL15Q16663 113 aa23.41■■□□□ 1.34
FGFR1-223ENST00000496296 GNPTABQ3T906 1256 aa23.41■■□□□ 1.34
FGFR1-223ENST00000496296 FIGNQ5HY92 759 aa23.41■■□□□ 1.34
FGFR1-223ENST00000496296 SYT2Q8N9I0 419 aaPredicted RBP23.41■■□□□ 1.34
FGFR1-223ENST00000496296 ZNF397Q8NF99 534 aaPredicted RBP23.41■■□□□ 1.34
FGFR1-223ENST00000496296 CNOT6LQ96LI5 555 aaKnown RBP23.41■■□□□ 1.34
FGFR1-223ENST00000496296 INPP4AQ96PE3 977 aaPredicted RBP23.41■■□□□ 1.34
FGFR1-223ENST00000496296 WDR24Q96S15 920 aa23.41■■□□□ 1.34
FGFR1-223ENST00000496296 TTYH3Q9C0H2 523 aa23.41■■□□□ 1.34
FGFR1-223ENST00000496296 DHX15O43143 795 aaKnown RBP23.4■■□□□ 1.34
FGFR1-223ENST00000496296 EYA4O95677 639 aa23.4■■□□□ 1.34
FGFR1-223ENST00000496296 ITGBL1O95965 494 aaPredicted RBP23.4■■□□□ 1.34
FGFR1-223ENST00000496296 SLC12A3P55017 1021 aa23.4■■□□□ 1.34
FGFR1-223ENST00000496296 LRRC63Q05C16 580 aa23.4■■□□□ 1.34
FGFR1-223ENST00000496296 ITGB3BPQ13352 177 aaPredicted RBP23.4■■□□□ 1.34
FGFR1-223ENST00000496296 CTTNQ14247 550 aaKnown RBP23.4■■□□□ 1.34
FGFR1-223ENST00000496296 OR8K1Q8NGG5 319 aa23.4■■□□□ 1.34
FGFR1-223ENST00000496296 SMCR8Q8TEV9 937 aaPredicted RBP23.4■■□□□ 1.34
FGFR1-223ENST00000496296 MS4A4AQ96JQ5 239 aa23.4■■□□□ 1.34
FGFR1-223ENST00000496296 ERGIC2Q96RQ1 377 aa23.4■■□□□ 1.34
FGFR1-223ENST00000496296 B4DLN1 442 aa23.39■■□□□ 1.34
FGFR1-223ENST00000496296 POTEB2H3BUK9 544 aa23.39■■□□□ 1.34
FGFR1-223ENST00000496296 FGFR1OPO95684 399 aaKnown RBP23.39■■□□□ 1.34
FGFR1-223ENST00000496296 STXBP2Q15833 593 aa23.39■■□□□ 1.34
FGFR1-223ENST00000496296 CCDC65Q8IXS2 484 aa23.39■■□□□ 1.34
FGFR1-223ENST00000496296 DNAJC19Q96DA6 116 aa23.39■■□□□ 1.34
FGFR1-223ENST00000496296 TXNRD2Q9NNW7 524 aa23.39■■□□□ 1.34
FGFR1-223ENST00000496296 SAMM50Q9Y512 469 aa23.39■■□□□ 1.34
FGFR1-223ENST00000496296 TTC26A0AVF1 554 aa23.39■■□□□ 1.33
FGFR1-223ENST00000496296 PDHXO00330 501 aa23.39■■□□□ 1.33
FGFR1-223ENST00000496296 CYP11B2P19099 503 aa23.39■■□□□ 1.33
FGFR1-223ENST00000496296 PSMC6P62333 389 aa23.39■■□□□ 1.33
FGFR1-223ENST00000496296 KRT76Q01546 638 aa23.39■■□□□ 1.33
FGFR1-223ENST00000496296 MKRN3Q13064 507 aaKnown RBP23.39■■□□□ 1.33
FGFR1-223ENST00000496296 MIIPQ5JXC2 388 aa23.39■■□□□ 1.33
FGFR1-223ENST00000496296 NACC1Q96RE7 527 aa23.39■■□□□ 1.33
FGFR1-223ENST00000496296 MPHOSPH6Q99547 160 aaKnown RBP23.39■■□□□ 1.33
FGFR1-223ENST00000496296 MROH8Q9H579 483 aa23.39■■□□□ 1.33
FGFR1-223ENST00000496296 PANK4Q9NVE7 773 aa23.39■■□□□ 1.33
FGFR1-223ENST00000496296 MEA1Q16626 185 aa23.38■■□□□ 1.33
FGFR1-223ENST00000496296 SPRYD7Q5W111 196 aa23.38■■□□□ 1.33
FGFR1-223ENST00000496296 DHX30Q7L2E3 1194 aaKnown RBP eCLIP23.38■■□□□ 1.33
FGFR1-223ENST00000496296 ANKRD23Q86SG2 305 aa23.38■■□□□ 1.33
FGFR1-223ENST00000496296 BHMT2Q9H2M3 363 aa23.38■■□□□ 1.33
FGFR1-223ENST00000496296 LUC7L2Q9Y383 392 aaKnown RBP23.38■■□□□ 1.33
FGFR1-223ENST00000496296 MRFAP1Q9Y605 127 aa23.38■■□□□ 1.33
FGFR1-223ENST00000496296 A0A1W2PQJ5 194 aa23.37■■□□□ 1.33
FGFR1-223ENST00000496296 URI1O94763 535 aaPredicted RBP23.37■■□□□ 1.33
FGFR1-223ENST00000496296 P4HBP07237 508 aaKnown RBP23.37■■□□□ 1.33
FGFR1-223ENST00000496296 SFNP31947 248 aa23.37■■□□□ 1.33
FGFR1-223ENST00000496296 ALDH5A1P51649 535 aaPredicted RBP23.37■■□□□ 1.33
FGFR1-223ENST00000496296 JAK3P52333 1124 aa23.37■■□□□ 1.33
FGFR1-223ENST00000496296 HTRA3P83110 453 aa23.37■■□□□ 1.33
FGFR1-223ENST00000496296 CNTN2Q02246 1040 aa23.37■■□□□ 1.33
FGFR1-223ENST00000496296 KCTD2Q14681 263 aa23.37■■□□□ 1.33
FGFR1-223ENST00000496296 SLC39A2Q9NP94 309 aa23.37■■□□□ 1.33
FGFR1-223ENST00000496296 MYO1AQ9UBC5 1043 aa23.37■■□□□ 1.33
FGFR1-223ENST00000496296 TADA3O75528 432 aa23.36■■□□□ 1.33
FGFR1-223ENST00000496296 EIF3JO75822 258 aaKnown RBP23.36■■□□□ 1.33
FGFR1-223ENST00000496296 CYP2C8P10632 490 aa23.36■■□□□ 1.33
FGFR1-223ENST00000496296 ERVK-9P63128 1117 aa23.36■■□□□ 1.33
FGFR1-223ENST00000496296 CCNA1P78396 465 aa23.36■■□□□ 1.33
FGFR1-223ENST00000496296 TUBB2AQ13885 445 aa23.36■■□□□ 1.33
FGFR1-223ENST00000496296 ELF2Q15723 593 aa23.36■■□□□ 1.33
FGFR1-223ENST00000496296 Q3C1V9 767 aa23.36■■□□□ 1.33
FGFR1-223ENST00000496296 ZNF662Q6ZS27 426 aa23.36■■□□□ 1.33
FGFR1-223ENST00000496296 SHCBP1Q8NEM2 672 aa23.36■■□□□ 1.33
FGFR1-223ENST00000496296 LXNQ9BS40 222 aa23.36■■□□□ 1.33
FGFR1-223ENST00000496296 TUBB2BQ9BVA1 445 aa23.36■■□□□ 1.33
FGFR1-223ENST00000496296 EFCAB8A8MWE9 144 aa23.36■■□□□ 1.33
FGFR1-223ENST00000496296 BTBD19C9JJ37 291 aa23.36■■□□□ 1.33
FGFR1-223ENST00000496296 ATP9AO75110 1047 aa23.36■■□□□ 1.33
FGFR1-223ENST00000496296 PRKCSHP14314 528 aaPredicted RBP23.36■■□□□ 1.33
FGFR1-223ENST00000496296 CST9Q5W186 159 aa23.36■■□□□ 1.33
FGFR1-223ENST00000496296 BRI3BPQ8WY22 251 aa23.36■■□□□ 1.33
FGFR1-223ENST00000496296 ZSWIM4Q9H7M6 989 aa23.36■■□□□ 1.33
FGFR1-223ENST00000496296 PASKQ96RG2 1323 aa23.35■■□□□ 1.33
FGFR1-223ENST00000496296 RASSF10A6NK89 507 aa23.35■■□□□ 1.33
Retrieved 100 of 20,778 RNA–protein pairs in 110.7 ms