RNA–Protein interactions for RNA: ENST00000495554.1

CHTOP-206, Transcript of chromatin target of PRMT1, humanhuman

TSL 2

Gene CHTOP, Length 2,553 nt, Biotype processed transcript, Subcellular localisation Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CHTOP-206ENST00000495554 CYP4A11Q02928 519 aa16.27■□□□□ 0.2
CHTOP-206ENST00000495554 NBPF20Q3BBV1 942 aa16.27■□□□□ 0.2
CHTOP-206ENST00000495554 SFR1Q86XK3 245 aa16.27■□□□□ 0.2
CHTOP-206ENST00000495554 MSL3Q8N5Y2 521 aaKnown RBP16.27■□□□□ 0.2
CHTOP-206ENST00000495554 GPATCH11Q8N954 259 aa16.27■□□□□ 0.2
CHTOP-206ENST00000495554 ALS2CR12Q96Q35 445 aa16.27■□□□□ 0.2
CHTOP-206ENST00000495554 EIF2AK1Q9BQI3 630 aaKnown RBP16.27■□□□□ 0.2
CHTOP-206ENST00000495554 BHMT2Q9H2M3 363 aa16.27■□□□□ 0.2
CHTOP-206ENST00000495554 ABCB6Q9NP58 842 aa16.27■□□□□ 0.2
CHTOP-206ENST00000495554 NLRC4Q9NPP4 1024 aa16.27■□□□□ 0.2
CHTOP-206ENST00000495554 UTRNP46939 3433 aa16.27■□□□□ 0.2
CHTOP-206ENST00000495554 RBAK-RBAKDNI3L0D1 243 aa16.27■□□□□ 0.19
CHTOP-206ENST00000495554 PDXKO00764 312 aa16.27■□□□□ 0.19
CHTOP-206ENST00000495554 EYA4O95677 639 aa16.27■□□□□ 0.19
CHTOP-206ENST00000495554 SERPING1P05155 500 aa16.27■□□□□ 0.19
CHTOP-206ENST00000495554 MCM3P25205 808 aa16.27■□□□□ 0.19
CHTOP-206ENST00000495554 INPP5BP32019 993 aa16.27■□□□□ 0.19
CHTOP-206ENST00000495554 USP14P54578 494 aa16.27■□□□□ 0.19
CHTOP-206ENST00000495554 CEP120Q8N960 986 aa16.27■□□□□ 0.19
CHTOP-206ENST00000495554 CAPZA3Q96KX2 299 aa16.27■□□□□ 0.19
CHTOP-206ENST00000495554 WDR18Q9BV38 432 aa16.27■□□□□ 0.19
CHTOP-206ENST00000495554 RABGAP1Q9Y3P9 1069 aa16.27■□□□□ 0.19
CHTOP-206ENST00000495554 GCOM1H8Y6P7 765 aaPredicted RBP16.26■□□□□ 0.19
CHTOP-206ENST00000495554 POLR2MP0CAP2 368 aa16.26■□□□□ 0.19
CHTOP-206ENST00000495554 PRLRP16471 622 aa16.26■□□□□ 0.19
CHTOP-206ENST00000495554 PTGER2P43116 358 aa16.26■□□□□ 0.19
CHTOP-206ENST00000495554 POLR2FP61218 127 aaKnown RBP16.26■□□□□ 0.19
CHTOP-206ENST00000495554 TDRD12Q587J7 1177 aaKnown RBP16.26■□□□□ 0.19
CHTOP-206ENST00000495554 IQCEQ6IPM2 695 aa16.26■□□□□ 0.19
CHTOP-206ENST00000495554 SLC30A10Q6XR72 485 aa16.26■□□□□ 0.19
CHTOP-206ENST00000495554 FRMD5Q7Z6J6 570 aa16.26■□□□□ 0.19
CHTOP-206ENST00000495554 SNX12Q9UMY4 172 aa16.26■□□□□ 0.19
CHTOP-206ENST00000495554 CAPN6Q9Y6Q1 641 aa16.26■□□□□ 0.19
CHTOP-206ENST00000495554 BRCA1P38398 1863 aaKnown RBP16.26■□□□□ 0.19
CHTOP-206ENST00000495554 EML1O00423 815 aa16.26■□□□□ 0.19
CHTOP-206ENST00000495554 IRF6O14896 467 aa16.26■□□□□ 0.19
CHTOP-206ENST00000495554 CALUO43852 315 aaPredicted RBP16.26■□□□□ 0.19
CHTOP-206ENST00000495554 TBCAO75347 108 aaKnown RBP16.26■□□□□ 0.19
CHTOP-206ENST00000495554 GFPT1Q06210 699 aaPredicted RBP16.26■□□□□ 0.19
CHTOP-206ENST00000495554 KCNH2Q12809 1159 aa16.26■□□□□ 0.19
CHTOP-206ENST00000495554 BMT2Q1RMZ1 405 aa16.26■□□□□ 0.19
CHTOP-206ENST00000495554 FAM160B2Q86V87 743 aa16.26■□□□□ 0.19
CHTOP-206ENST00000495554 CAGE1Q8TC20 777 aa16.26■□□□□ 0.19
CHTOP-206ENST00000495554 HSD17B14Q9BPX1 270 aa16.26■□□□□ 0.19
CHTOP-206ENST00000495554 CRACR2AQ9BSW2 395 aa16.26■□□□□ 0.19
CHTOP-206ENST00000495554 LUC7LQ9NQ29 371 aaKnown RBP16.26■□□□□ 0.19
CHTOP-206ENST00000495554 ARMCX3Q9UH62 379 aaPredicted RBP16.26■□□□□ 0.19
CHTOP-206ENST00000495554 FEM1BQ9UK73 627 aa16.26■□□□□ 0.19
CHTOP-206ENST00000495554 TARSL2A2RTX5 802 aaKnown RBP16.25■□□□□ 0.19
CHTOP-206ENST00000495554 OAS2P29728 719 aaKnown RBP16.25■□□□□ 0.19
CHTOP-206ENST00000495554 PRELPP51888 382 aa16.25■□□□□ 0.19
CHTOP-206ENST00000495554 TNIP1Q15025 636 aa16.25■□□□□ 0.19
CHTOP-206ENST00000495554 OTOP1Q7RTM1 612 aa16.25■□□□□ 0.19
CHTOP-206ENST00000495554 LDHDQ86WU2 507 aa16.25■□□□□ 0.19
CHTOP-206ENST00000495554 MLXIPQ9HAP2 919 aa16.25■□□□□ 0.19
CHTOP-206ENST00000495554 TUFT1Q9NNX1 390 aa16.25■□□□□ 0.19
CHTOP-206ENST00000495554 ASTN2O75129 1339 aaPredicted RBP16.25■□□□□ 0.19
CHTOP-206ENST00000495554 TLR2O60603 784 aa16.25■□□□□ 0.19
CHTOP-206ENST00000495554 MOCS3O95396 460 aa16.25■□□□□ 0.19
CHTOP-206ENST00000495554 HOXD13P35453 343 aa16.25■□□□□ 0.19
CHTOP-206ENST00000495554 IRX5P78411 483 aaPredicted RBP16.25■□□□□ 0.19
CHTOP-206ENST00000495554 GPS2Q13227 327 aa16.25■□□□□ 0.19
CHTOP-206ENST00000495554 RNF10Q8N5U6 811 aaKnown RBP16.25■□□□□ 0.19
CHTOP-206ENST00000495554 RUSC1Q9BVN2 902 aa16.25■□□□□ 0.19
CHTOP-206ENST00000495554 EHMT1Q9H9B1 1298 aa16.25■□□□□ 0.19
CHTOP-206ENST00000495554 OLFML3Q9NRN5 406 aa16.25■□□□□ 0.19
CHTOP-206ENST00000495554 RGL1Q9NZL6 768 aa16.25■□□□□ 0.19
CHTOP-206ENST00000495554 MRPL11Q9Y3B7 192 aaKnown RBP16.25■□□□□ 0.19
CHTOP-206ENST00000495554 ZNF536O15090 1300 aa16.24■□□□□ 0.19
CHTOP-206ENST00000495554 PSMD10O75832 226 aa16.24■□□□□ 0.19
CHTOP-206ENST00000495554 MYBP10242 640 aa16.24■□□□□ 0.19
CHTOP-206ENST00000495554 GAP43P17677 238 aa16.24■□□□□ 0.19
CHTOP-206ENST00000495554 RPL13P26373 211 aaKnown RBP16.24■□□□□ 0.19
CHTOP-206ENST00000495554 PPP2R5CQ13362 524 aa16.24■□□□□ 0.19
CHTOP-206ENST00000495554 LRCH2Q5VUJ6 765 aa16.24■□□□□ 0.19
CHTOP-206ENST00000495554 ZNF341Q9BYN7 854 aa16.24■□□□□ 0.19
CHTOP-206ENST00000495554 MTFR1LQ9H019 292 aa16.24■□□□□ 0.19
CHTOP-206ENST00000495554 TYW1Q9NV66 732 aaKnown RBP16.24■□□□□ 0.19
CHTOP-206ENST00000495554 AIPL1Q9NZN9 384 aa16.24■□□□□ 0.19
CHTOP-206ENST00000495554 ZNF185O15231 689 aa16.24■□□□□ 0.19
CHTOP-206ENST00000495554 POLR3GO15318 223 aaPredicted RBP16.24■□□□□ 0.19
CHTOP-206ENST00000495554 EIF3JO75822 258 aaKnown RBP16.24■□□□□ 0.19
CHTOP-206ENST00000495554 PRPF6O94906 941 aaKnown RBP16.24■□□□□ 0.19
CHTOP-206ENST00000495554 UBXN2AP68543 259 aa16.24■□□□□ 0.19
CHTOP-206ENST00000495554 RINT1Q6NUQ1 792 aa16.24■□□□□ 0.19
CHTOP-206ENST00000495554 SAMD7Q7Z3H4 446 aa16.24■□□□□ 0.19
CHTOP-206ENST00000495554 SLC5A5Q92911 643 aa16.24■□□□□ 0.19
CHTOP-206ENST00000495554 AGBL1Q96MI9 1066 aa16.24■□□□□ 0.19
CHTOP-206ENST00000495554 NOX5Q96PH1 765 aa16.24■□□□□ 0.19
CHTOP-206ENST00000495554 DEFB129Q9H1M3 183 aa16.24■□□□□ 0.19
CHTOP-206ENST00000495554 PPP1R1BQ9UD71 204 aaPredicted RBP16.24■□□□□ 0.19
CHTOP-206ENST00000495554 TCP1P17987 556 aaKnown RBP16.23■□□□□ 0.19
CHTOP-206ENST00000495554 POLD1P28340 1107 aa16.23■□□□□ 0.19
CHTOP-206ENST00000495554 RASSF7Q02833 373 aa16.23■□□□□ 0.19
CHTOP-206ENST00000495554 CREG2Q8IUH2 290 aa16.23■□□□□ 0.19
CHTOP-206ENST00000495554 GPIHBP1Q8IV16 184 aa16.23■□□□□ 0.19
CHTOP-206ENST00000495554 GANQ9H2C0 597 aa16.23■□□□□ 0.19
CHTOP-206ENST00000495554 METTL14Q9HCE5 456 aaKnown RBP16.23■□□□□ 0.19
CHTOP-206ENST00000495554 RSPH10B2B2RC85 870 aa16.23■□□□□ 0.19
CHTOP-206ENST00000495554 PDE2AO00408 941 aaPredicted RBP16.23■□□□□ 0.19
Retrieved 100 of 20,778 RNA–protein pairs in 42.9 ms