RNA–Protein interactions for RNA: ENST00000494334.1

COL1A1-208, Transcript of collagen type I alpha 1 chain, humanhuman

TSL 2

Gene COL1A1, Length 396 nt, Biotype retained intron.

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
COL1A1-208ENST00000494334 CSF2RAP15509 400 aa15.22■□□□□ 0.03
COL1A1-208ENST00000494334 BMP8BP34820 402 aa15.22■□□□□ 0.03
COL1A1-208ENST00000494334 TECP42680 631 aa15.22■□□□□ 0.03
COL1A1-208ENST00000494334 PSMC5P62195 406 aa15.22■□□□□ 0.03
COL1A1-208ENST00000494334 PRKCEQ02156 737 aa15.22■□□□□ 0.03
COL1A1-208ENST00000494334 RBL2Q08999 1139 aa15.22■□□□□ 0.03
COL1A1-208ENST00000494334 ZNF484Q5JVG2 852 aa15.22■□□□□ 0.03
COL1A1-208ENST00000494334 TMEM199Q8N511 208 aa15.22■□□□□ 0.03
COL1A1-208ENST00000494334 RETREG2Q8NC44 543 aa15.22■□□□□ 0.03
COL1A1-208ENST00000494334 ZBTB10Q96DT7 871 aa15.22■□□□□ 0.03
COL1A1-208ENST00000494334 SCLYQ96I15 445 aa15.22■□□□□ 0.03
COL1A1-208ENST00000494334 NRBP2Q9NSY0 501 aa15.22■□□□□ 0.03
COL1A1-208ENST00000494334 RGL1Q9NZL6 768 aa15.22■□□□□ 0.03
COL1A1-208ENST00000494334 TUBE1Q9UJT0 475 aa15.22■□□□□ 0.03
COL1A1-208ENST00000494334 POTEMA6NI47 508 aa15.21■□□□□ 0.03
COL1A1-208ENST00000494334 ZBTB42B2RXF5 422 aa15.21■□□□□ 0.03
COL1A1-208ENST00000494334 SLITRK3O94933 977 aa15.21■□□□□ 0.03
COL1A1-208ENST00000494334 IQCF3P0C7M6 154 aa15.21■□□□□ 0.03
COL1A1-208ENST00000494334 CKBP12277 381 aa15.21■□□□□ 0.03
COL1A1-208ENST00000494334 QARSP47897 775 aaKnown RBP15.21■□□□□ 0.03
COL1A1-208ENST00000494334 FPGSQ05932 587 aa15.21■□□□□ 0.03
COL1A1-208ENST00000494334 XKR3Q5GH77 459 aa15.21■□□□□ 0.03
COL1A1-208ENST00000494334 MTHFD1LQ6UB35 978 aa15.21■□□□□ 0.03
COL1A1-208ENST00000494334 RUFY4Q6ZNE9 571 aa15.21■□□□□ 0.03
COL1A1-208ENST00000494334 CCDC155Q8N6L0 562 aa15.21■□□□□ 0.03
COL1A1-208ENST00000494334 DYDC2Q96IM9 177 aa15.21■□□□□ 0.03
COL1A1-208ENST00000494334 FAM167AQ96KS9 214 aa15.21■□□□□ 0.03
COL1A1-208ENST00000494334 HSD17B14Q9BPX1 270 aa15.21■□□□□ 0.03
COL1A1-208ENST00000494334 EIF2AK1Q9BQI3 630 aaKnown RBP15.21■□□□□ 0.03
COL1A1-208ENST00000494334 WRAP73Q9P2S5 460 aaPredicted RBP15.21■□□□□ 0.03
COL1A1-208ENST00000494334 COLQQ9Y215 455 aaPredicted RBP15.21■□□□□ 0.03
COL1A1-208ENST00000494334 COL1A2P08123 1366 aa15.21■□□□□ 0.02
COL1A1-208ENST00000494334 LAD1O00515 517 aa15.2■□□□□ 0.02
COL1A1-208ENST00000494334 PDIA4P13667 645 aaKnown RBP15.2■□□□□ 0.02
COL1A1-208ENST00000494334 SELPP16109 830 aa15.2■□□□□ 0.02
COL1A1-208ENST00000494334 KLRC1P26715 233 aa15.2■□□□□ 0.02
COL1A1-208ENST00000494334 THPOP40225 353 aa15.2■□□□□ 0.02
COL1A1-208ENST00000494334 FXR2P51116 673 aaKnown RBP eCLIP15.2■□□□□ 0.02
COL1A1-208ENST00000494334 EPHB4P54760 987 aa15.2■□□□□ 0.02
COL1A1-208ENST00000494334 ATP2C1P98194 919 aaPredicted RBP15.2■□□□□ 0.02
COL1A1-208ENST00000494334 CYP4A11Q02928 519 aa15.2■□□□□ 0.02
COL1A1-208ENST00000494334 CTTNQ14247 550 aaKnown RBP15.2■□□□□ 0.02
COL1A1-208ENST00000494334 BECN1Q14457 450 aa15.2■□□□□ 0.02
COL1A1-208ENST00000494334 IL17AQ16552 155 aa15.2■□□□□ 0.02
COL1A1-208ENST00000494334 ZNF618Q5T7W0 954 aa15.2■□□□□ 0.02
COL1A1-208ENST00000494334 TAF2Q6P1X5 1199 aa15.2■□□□□ 0.02
COL1A1-208ENST00000494334 FAM173BQ6P4H8 233 aa15.2■□□□□ 0.02
COL1A1-208ENST00000494334 TRAF7Q6Q0C0 670 aa15.2■□□□□ 0.02
COL1A1-208ENST00000494334 C4orf19Q8IY42 314 aa15.2■□□□□ 0.02
COL1A1-208ENST00000494334 LXNQ9BS40 222 aa15.2■□□□□ 0.02
COL1A1-208ENST00000494334 NIFKQ9BYG3 293 aaKnown RBP15.2■□□□□ 0.02
COL1A1-208ENST00000494334 UBE2OQ9C0C9 1292 aaKnown RBP15.2■□□□□ 0.02
COL1A1-208ENST00000494334 ZSCAN16Q9H4T2 348 aaPredicted RBP15.2■□□□□ 0.02
COL1A1-208ENST00000494334 CEP131Q9UPN4 1083 aa15.2■□□□□ 0.02
COL1A1-208ENST00000494334 PCDHA2Q9Y5H9 948 aa15.2■□□□□ 0.02
COL1A1-208ENST00000494334 TMEM150BA6NC51 233 aa15.19■□□□□ 0.02
COL1A1-208ENST00000494334 DDX11L8A8MPP1 907 aa15.19■□□□□ 0.02
COL1A1-208ENST00000494334 DKC1O60832 514 aaKnown RBP eCLIP15.19■□□□□ 0.02
COL1A1-208ENST00000494334 PRPHP41219 470 aa15.19■□□□□ 0.02
COL1A1-208ENST00000494334 PPIGQ13427 754 aaKnown RBP eCLIP15.19■□□□□ 0.02
COL1A1-208ENST00000494334 GPNMBQ14956 572 aa15.19■□□□□ 0.02
COL1A1-208ENST00000494334 TARBP2Q15633 366 aaKnown RBP15.19■□□□□ 0.02
COL1A1-208ENST00000494334 TMEM266Q2M3C6 531 aa15.19■□□□□ 0.02
COL1A1-208ENST00000494334 ANO5Q75V66 913 aa15.19■□□□□ 0.02
COL1A1-208ENST00000494334 LRRC8DQ7L1W4 858 aa15.19■□□□□ 0.02
COL1A1-208ENST00000494334 C16orf59Q7L2K0 433 aa15.19■□□□□ 0.02
COL1A1-208ENST00000494334 RPAINQ86UA6 219 aa15.19■□□□□ 0.02
COL1A1-208ENST00000494334 TPH2Q8IWU9 490 aa15.19■□□□□ 0.02
COL1A1-208ENST00000494334 DNAJB3Q8WWF6 145 aa15.19■□□□□ 0.02
COL1A1-208ENST00000494334 VWCEQ96DN2 955 aa15.19■□□□□ 0.02
COL1A1-208ENST00000494334 ZSWIM4Q9H7M6 989 aa15.19■□□□□ 0.02
COL1A1-208ENST00000494334 LTBP2Q14767 1821 aa15.19■□□□□ 0.02
COL1A1-208ENST00000494334 CEP290O15078 2479 aa15.19■□□□□ 0.02
COL1A1-208ENST00000494334 SMIM35A0A1B0GVV1 85 aa15.18■□□□□ 0.02
COL1A1-208ENST00000494334 CAND2O75155 1236 aa15.18■□□□□ 0.02
COL1A1-208ENST00000494334 C22orf31O95567 290 aa15.18■□□□□ 0.02
COL1A1-208ENST00000494334 SPATA31C1P0DKV0 1188 aa15.18■□□□□ 0.02
COL1A1-208ENST00000494334 ACRP10323 421 aa15.18■□□□□ 0.02
COL1A1-208ENST00000494334 PKP1Q13835 747 aa15.18■□□□□ 0.02
COL1A1-208ENST00000494334 PDIA5Q14554 519 aa15.18■□□□□ 0.02
COL1A1-208ENST00000494334 SF3A1Q15459 793 aaKnown RBP15.18■□□□□ 0.02
COL1A1-208ENST00000494334 DTHD1Q6ZMT9 781 aa15.18■□□□□ 0.02
COL1A1-208ENST00000494334 IGSF22Q8N9C0 903 aa15.18■□□□□ 0.02
COL1A1-208ENST00000494334 NEK9Q8TD19 979 aa15.18■□□□□ 0.02
COL1A1-208ENST00000494334 CEP89Q96ST8 783 aa15.18■□□□□ 0.02
COL1A1-208ENST00000494334 SH2D3AQ9BRG2 576 aa15.18■□□□□ 0.02
COL1A1-208ENST00000494334 IL23AQ9NPF7 189 aa15.18■□□□□ 0.02
COL1A1-208ENST00000494334 SEPT9Q9UHD8 586 aaPredicted RBP15.18■□□□□ 0.02
COL1A1-208ENST00000494334 TRIP12Q14669 1992 aaPredicted RBP15.18■□□□□ 0.02
COL1A1-208ENST00000494334 RSPH10B2B2RC85 870 aa15.17■□□□□ 0.02
COL1A1-208ENST00000494334 RBAK-RBAKDNI3L0D1 243 aa15.17■□□□□ 0.02
COL1A1-208ENST00000494334 ZBTB39O15060 712 aa15.17■□□□□ 0.02
COL1A1-208ENST00000494334 MAGEB2O15479 319 aa15.17■□□□□ 0.02
COL1A1-208ENST00000494334 MED24O75448 989 aa15.17■□□□□ 0.02
COL1A1-208ENST00000494334 LYPLA2O95372 231 aa15.17■□□□□ 0.02
COL1A1-208ENST00000494334 CTSHP09668 335 aa15.17■□□□□ 0.02
COL1A1-208ENST00000494334 RSPH10BP0C881 870 aa15.17■□□□□ 0.02
COL1A1-208ENST00000494334 ZSCAN22P10073 491 aaPredicted RBP15.17■□□□□ 0.02
COL1A1-208ENST00000494334 YWHABP31946 246 aaKnown RBP15.17■□□□□ 0.02
COL1A1-208ENST00000494334 RFC2P35250 354 aa15.17■□□□□ 0.02
Retrieved 100 of 20,778 RNA–protein pairs in 39.8 ms