RNA–Protein interactions for RNA: ENST00000489142.5

VTI1A-206, Transcript of vesicle transport through interaction with t-SNAREs 1A, humanhuman

TSL 2

Gene VTI1A, Length 727 nt, Biotype processed transcript, Subcellular localisation Cytoplasm, Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
VTI1A-206ENST00000489142 NECAB1Q8N987 351 aa15.9■□□□□ 0.14
VTI1A-206ENST00000489142 TBCKQ8TEA7 893 aa15.9■□□□□ 0.14
VTI1A-206ENST00000489142 IFIH1Q9BYX4 1025 aaKnown RBP15.9■□□□□ 0.14
VTI1A-206ENST00000489142 ZNF302Q9NR11 478 aa15.9■□□□□ 0.14
VTI1A-206ENST00000489142 NLRC5Q86WI3 1866 aa15.89■□□□□ 0.13
VTI1A-206ENST00000489142 LOC101059915A0A1B0GWI6 518 aaPredicted RBP15.89■□□□□ 0.13
VTI1A-206ENST00000489142 RRN3P2A6NIE6 340 aa15.89■□□□□ 0.13
VTI1A-206ENST00000489142 MSH4O15457 936 aa15.89■□□□□ 0.13
VTI1A-206ENST00000489142 CHMP2AO43633 222 aa15.89■□□□□ 0.13
VTI1A-206ENST00000489142 PFKFB2O60825 505 aa15.89■□□□□ 0.13
VTI1A-206ENST00000489142 EFCAB14O75071 495 aa15.89■□□□□ 0.13
VTI1A-206ENST00000489142 CTDNEP1O95476 244 aa15.89■□□□□ 0.13
VTI1A-206ENST00000489142 TDP2O95551 362 aa15.89■□□□□ 0.13
VTI1A-206ENST00000489142 ATP4AP20648 1035 aa15.89■□□□□ 0.13
VTI1A-206ENST00000489142 CIITAP33076 1130 aa15.89■□□□□ 0.13
VTI1A-206ENST00000489142 ANAPC15P60006 121 aa15.89■□□□□ 0.13
VTI1A-206ENST00000489142 MRPS6P82932 125 aaKnown RBP15.89■□□□□ 0.13
VTI1A-206ENST00000489142 RSPH3Q86UC2 560 aa15.89■□□□□ 0.13
VTI1A-206ENST00000489142 RAD9AQ99638 391 aa15.89■□□□□ 0.13
VTI1A-206ENST00000489142 TCEAL9Q9UHQ7 104 aa15.89■□□□□ 0.13
VTI1A-206ENST00000489142 SAMM50Q9Y512 469 aa15.89■□□□□ 0.13
VTI1A-206ENST00000489142 PRRC2BQ5JSZ5 2229 aaKnown RBP15.88■□□□□ 0.13
VTI1A-206ENST00000489142 M0R2N6 131 aa15.88■□□□□ 0.13
VTI1A-206ENST00000489142 MTHFD1LQ6UB35 978 aa15.88■□□□□ 0.13
VTI1A-206ENST00000489142 RPAINQ86UA6 219 aa15.88■□□□□ 0.13
VTI1A-206ENST00000489142 CKAP2LQ8IYA6 745 aa15.88■□□□□ 0.13
VTI1A-206ENST00000489142 GDPD5Q8WTR4 605 aa15.88■□□□□ 0.13
VTI1A-206ENST00000489142 PPP1R16BQ96T49 567 aa15.88■□□□□ 0.13
VTI1A-206ENST00000489142 TBC1D22BQ9NU19 505 aa15.88■□□□□ 0.13
VTI1A-206ENST00000489142 GABBR1Q9UBS5 961 aa15.88■□□□□ 0.13
VTI1A-206ENST00000489142 VCANP13611 3396 aa15.87■□□□□ 0.13
VTI1A-206ENST00000489142 LINC01553A4QN01 128 aa15.87■□□□□ 0.13
VTI1A-206ENST00000489142 ZBTB42B2RXF5 422 aa15.87■□□□□ 0.13
VTI1A-206ENST00000489142 CDKL5O76039 1030 aa15.87■□□□□ 0.13
VTI1A-206ENST00000489142 KLRC1P26715 233 aa15.87■□□□□ 0.13
VTI1A-206ENST00000489142 FOSBP53539 338 aa15.87■□□□□ 0.13
VTI1A-206ENST00000489142 KRT76Q01546 638 aa15.87■□□□□ 0.13
VTI1A-206ENST00000489142 ME3Q16798 604 aa15.87■□□□□ 0.13
VTI1A-206ENST00000489142 INF2Q27J81 1249 aa15.87■□□□□ 0.13
VTI1A-206ENST00000489142 FBXO47Q5MNV8 452 aa15.87■□□□□ 0.13
VTI1A-206ENST00000489142 ZNF746Q6NUN9 644 aaPredicted RBP15.87■□□□□ 0.13
VTI1A-206ENST00000489142 DAGLBQ8NCG7 672 aa15.87■□□□□ 0.13
VTI1A-206ENST00000489142 ATP8B4Q8TF62 1192 aa15.87■□□□□ 0.13
VTI1A-206ENST00000489142 COL25A1Q9BXS0 654 aaPredicted RBP15.87■□□□□ 0.13
VTI1A-206ENST00000489142 AGO3Q9H9G7 860 aaKnown RBP15.87■□□□□ 0.13
VTI1A-206ENST00000489142 PCDHA2Q9Y5H9 948 aa15.87■□□□□ 0.13
VTI1A-206ENST00000489142 HBP1O60381 514 aa15.86■□□□□ 0.13
VTI1A-206ENST00000489142 GAS7O60861 476 aa15.86■□□□□ 0.13
VTI1A-206ENST00000489142 PSAPP07602 524 aa15.86■□□□□ 0.13
VTI1A-206ENST00000489142 CD52P31358 61 aa15.86■□□□□ 0.13
VTI1A-206ENST00000489142 SLC26A2P50443 739 aa15.86■□□□□ 0.13
VTI1A-206ENST00000489142 USP11P51784 963 aa15.86■□□□□ 0.13
VTI1A-206ENST00000489142 NEK4P51957 841 aa15.86■□□□□ 0.13
VTI1A-206ENST00000489142 GRB10Q13322 594 aa15.86■□□□□ 0.13
VTI1A-206ENST00000489142 UGCGQ16739 394 aa15.86■□□□□ 0.13
VTI1A-206ENST00000489142 LRCH2Q5VUJ6 765 aa15.86■□□□□ 0.13
VTI1A-206ENST00000489142 SMAP1Q8IYB5 467 aaPredicted RBP15.86■□□□□ 0.13
VTI1A-206ENST00000489142 OXER1Q8TDS5 423 aa15.86■□□□□ 0.13
VTI1A-206ENST00000489142 APBB2Q92870 758 aa15.86■□□□□ 0.13
VTI1A-206ENST00000489142 SLC5A5Q92911 643 aa15.86■□□□□ 0.13
VTI1A-206ENST00000489142 C17orf80Q9BSJ5 609 aa15.86■□□□□ 0.13
VTI1A-206ENST00000489142 PHF20Q9BVI0 1012 aa15.86■□□□□ 0.13
VTI1A-206ENST00000489142 UNC45AQ9H3U1 944 aa15.86■□□□□ 0.13
VTI1A-206ENST00000489142 ORC3Q9UBD5 711 aaPredicted RBP15.86■□□□□ 0.13
VTI1A-206ENST00000489142 GINS2Q9Y248 185 aa15.86■□□□□ 0.13
VTI1A-206ENST00000489142 PCDHA10Q9Y5I2 948 aa15.86■□□□□ 0.13
VTI1A-206ENST00000489142 TRPV2Q9Y5S1 764 aa15.86■□□□□ 0.13
VTI1A-206ENST00000489142 MTCH2Q9Y6C9 303 aa15.86■□□□□ 0.13
VTI1A-206ENST00000489142 STK36Q9NRP7 1315 aa15.86■□□□□ 0.13
VTI1A-206ENST00000489142 M0QZ92 97 aa15.85■□□□□ 0.13
VTI1A-206ENST00000489142 LPXNO60711 386 aa15.85■□□□□ 0.13
VTI1A-206ENST00000489142 IBSPP21815 317 aaPredicted RBP15.85■□□□□ 0.13
VTI1A-206ENST00000489142 NONOQ15233 471 aaKnown RBP eCLIP15.85■□□□□ 0.13
VTI1A-206ENST00000489142 ANKRD1Q15327 319 aa15.85■□□□□ 0.13
VTI1A-206ENST00000489142 TMEM266Q2M3C6 531 aa15.85■□□□□ 0.13
VTI1A-206ENST00000489142 IER5Q5VY09 327 aa15.85■□□□□ 0.13
VTI1A-206ENST00000489142 TSHZ1Q6ZSZ6 1077 aa15.85■□□□□ 0.13
VTI1A-206ENST00000489142 LINC01599Q8WXQ3 324 aa15.85■□□□□ 0.13
VTI1A-206ENST00000489142 TNPO1Q92973 898 aaKnown RBP15.85■□□□□ 0.13
VTI1A-206ENST00000489142 TOP1MTQ969P6 601 aa15.85■□□□□ 0.13
VTI1A-206ENST00000489142 TGS1Q96RS0 853 aaKnown RBP15.85■□□□□ 0.13
VTI1A-206ENST00000489142 YME1L1Q96TA2 773 aa15.85■□□□□ 0.13
VTI1A-206ENST00000489142 DISC1Q9NRI5 854 aa15.85■□□□□ 0.13
VTI1A-206ENST00000489142 INSL6Q9Y581 213 aa15.85■□□□□ 0.13
VTI1A-206ENST00000489142 MAFBQ9Y5Q3 323 aaPredicted RBP15.85■□□□□ 0.13
VTI1A-206ENST00000489142 IGSF9BQ9UPX0 1349 aa15.85■□□□□ 0.13
VTI1A-206ENST00000489142 SMIM35A0A1B0GVV1 85 aa15.84■□□□□ 0.13
VTI1A-206ENST00000489142 FAM205CA6NFA0 338 aa15.84■□□□□ 0.13
VTI1A-206ENST00000489142 WDR64B1ANS9 1081 aa15.84■□□□□ 0.13
VTI1A-206ENST00000489142 GTPBP6O43824 516 aaPredicted RBP15.84■□□□□ 0.13
VTI1A-206ENST00000489142 SLC37A4O43826 429 aa15.84■□□□□ 0.13
VTI1A-206ENST00000489142 C22orf31O95567 290 aa15.84■□□□□ 0.13
VTI1A-206ENST00000489142 FDPSP14324 419 aaKnown RBP15.84■□□□□ 0.13
VTI1A-206ENST00000489142 ERVK-21P61565 698 aa15.84■□□□□ 0.13
VTI1A-206ENST00000489142 HTRA4P83105 476 aaPredicted RBP15.84■□□□□ 0.13
VTI1A-206ENST00000489142 PRKCEQ02156 737 aa15.84■□□□□ 0.13
VTI1A-206ENST00000489142 SKIV2LQ15477 1246 aaKnown RBP15.84■□□□□ 0.13
VTI1A-206ENST00000489142 LETM2Q2VYF4 491 aa15.84■□□□□ 0.13
VTI1A-206ENST00000489142 Q4G0T1 1027 aa15.84■□□□□ 0.13
VTI1A-206ENST00000489142 ZNF484Q5JVG2 852 aa15.84■□□□□ 0.13
Retrieved 100 of 20,778 RNA–protein pairs in 49.6 ms