RNA–Protein interactions for RNA: ENST00000488920.2

CCHCR1-215, Transcript of coiled-coil alpha-helical rod protein 1, humanhuman

TSL 3

Gene CCHCR1, Length 715 nt, Biotype nonsense mediated decay.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CCHCR1-215ENST00000488920 EDIL3O43854 480 aa13.55□□□□□ -0.24
CCHCR1-215ENST00000488920 KLRC1P26715 233 aa13.55□□□□□ -0.24
CCHCR1-215ENST00000488920 SLC26A2P50443 739 aa13.55□□□□□ -0.24
CCHCR1-215ENST00000488920 FBXO47Q5MNV8 452 aa13.55□□□□□ -0.24
CCHCR1-215ENST00000488920 IER5Q5VY09 327 aa13.55□□□□□ -0.24
CCHCR1-215ENST00000488920 FAM160B1Q5W0V3 765 aa13.55□□□□□ -0.24
CCHCR1-215ENST00000488920 MIS18BP1Q6P0N0 1132 aa13.55□□□□□ -0.24
CCHCR1-215ENST00000488920 PDXDC2PQ6P474 469 aa13.55□□□□□ -0.24
CCHCR1-215ENST00000488920 MTHFD1LQ6UB35 978 aa13.55□□□□□ -0.24
CCHCR1-215ENST00000488920 CCDC60Q8IWA6 550 aaPredicted RBP13.55□□□□□ -0.24
CCHCR1-215ENST00000488920 AGO3Q9H9G7 860 aaKnown RBP13.55□□□□□ -0.24
CCHCR1-215ENST00000488920 ZNF302Q9NR11 478 aa13.55□□□□□ -0.24
CCHCR1-215ENST00000488920 SH3GLB2Q9NR46 395 aa13.55□□□□□ -0.24
CCHCR1-215ENST00000488920 TBC1D22BQ9NU19 505 aa13.55□□□□□ -0.24
CCHCR1-215ENST00000488920 HBP1O60381 514 aa13.54□□□□□ -0.24
CCHCR1-215ENST00000488920 ATP4AP20648 1035 aa13.54□□□□□ -0.24
CCHCR1-215ENST00000488920 CIITAP33076 1130 aa13.54□□□□□ -0.24
CCHCR1-215ENST00000488920 SETQ01105 290 aaPredicted RBP13.54□□□□□ -0.24
CCHCR1-215ENST00000488920 TFF2Q03403 129 aa13.54□□□□□ -0.24
CCHCR1-215ENST00000488920 TSHZ1Q6ZSZ6 1077 aa13.54□□□□□ -0.24
CCHCR1-215ENST00000488920 TRMT1LQ7Z2T5 733 aaKnown RBP13.54□□□□□ -0.24
CCHCR1-215ENST00000488920 CKAP2LQ8IYA6 745 aa13.54□□□□□ -0.24
CCHCR1-215ENST00000488920 SP7Q8TDD2 431 aaPredicted RBP13.54□□□□□ -0.24
CCHCR1-215ENST00000488920 ATP8B4Q8TF62 1192 aa13.54□□□□□ -0.24
CCHCR1-215ENST00000488920 AIFM3Q96NN9 605 aa13.54□□□□□ -0.24
CCHCR1-215ENST00000488920 TRANK1O15050 2925 aa13.53□□□□□ -0.24
CCHCR1-215ENST00000488920 M0QZ92 97 aa13.53□□□□□ -0.24
CCHCR1-215ENST00000488920 DTNBO60941 627 aa13.53□□□□□ -0.24
CCHCR1-215ENST00000488920 RPLP2P05387 115 aaKnown RBP13.53□□□□□ -0.24
CCHCR1-215ENST00000488920 CD52P31358 61 aa13.53□□□□□ -0.24
CCHCR1-215ENST00000488920 ZNF746Q6NUN9 644 aaPredicted RBP13.53□□□□□ -0.24
CCHCR1-215ENST00000488920 NME8Q8N427 588 aa13.53□□□□□ -0.24
CCHCR1-215ENST00000488920 FBXO22Q8NEZ5 403 aa13.53□□□□□ -0.24
CCHCR1-215ENST00000488920 LENG9Q96B70 501 aa13.53□□□□□ -0.24
CCHCR1-215ENST00000488920 IL17RAQ96F46 866 aa13.53□□□□□ -0.24
CCHCR1-215ENST00000488920 CELF4Q9BZC1 486 aaKnown RBP13.53□□□□□ -0.24
CCHCR1-215ENST00000488920 TCEAL9Q9UHQ7 104 aa13.53□□□□□ -0.24
CCHCR1-215ENST00000488920 PCDHA4Q9UN74 947 aa13.53□□□□□ -0.24
CCHCR1-215ENST00000488920 TRPV2Q9Y5S1 764 aa13.53□□□□□ -0.24
CCHCR1-215ENST00000488920 REV3LO60673 3130 aa13.53□□□□□ -0.24
CCHCR1-215ENST00000488920 SMIM35A0A1B0GVV1 85 aa13.52□□□□□ -0.25
CCHCR1-215ENST00000488920 ZBTB42B2RXF5 422 aa13.52□□□□□ -0.25
CCHCR1-215ENST00000488920 MSH4O15457 936 aa13.52□□□□□ -0.25
CCHCR1-215ENST00000488920 DEXIO95424 95 aa13.52□□□□□ -0.25
CCHCR1-215ENST00000488920 PSAPP07602 524 aa13.52□□□□□ -0.25
CCHCR1-215ENST00000488920 USP11P51784 963 aa13.52□□□□□ -0.25
CCHCR1-215ENST00000488920 KRT76Q01546 638 aa13.52□□□□□ -0.25
CCHCR1-215ENST00000488920 EPC2Q52LR7 807 aa13.52□□□□□ -0.25
CCHCR1-215ENST00000488920 ZNF484Q5JVG2 852 aa13.52□□□□□ -0.25
CCHCR1-215ENST00000488920 ERICH6BQ5W0A0 696 aa13.52□□□□□ -0.25
CCHCR1-215ENST00000488920 CPLX2Q6PUV4 134 aaKnown RBP13.52□□□□□ -0.25
CCHCR1-215ENST00000488920 RTN4RL1Q86UN2 441 aaPredicted RBP13.52□□□□□ -0.25
CCHCR1-215ENST00000488920 KIAA0319LQ8IZA0 1049 aa13.52□□□□□ -0.25
CCHCR1-215ENST00000488920 IL27Q8NEV9 243 aa13.52□□□□□ -0.25
CCHCR1-215ENST00000488920 TBCKQ8TEA7 893 aa13.52□□□□□ -0.25
CCHCR1-215ENST00000488920 GJA10Q969M2 543 aa13.52□□□□□ -0.25
CCHCR1-215ENST00000488920 LMCD1Q9NZU5 365 aa13.52□□□□□ -0.25
CCHCR1-215ENST00000488920 GABBR1Q9UBS5 961 aa13.52□□□□□ -0.25
CCHCR1-215ENST00000488920 GINS2Q9Y248 185 aa13.52□□□□□ -0.25
CCHCR1-215ENST00000488920 SAMM50Q9Y512 469 aa13.52□□□□□ -0.25
CCHCR1-215ENST00000488920 PCDHA10Q9Y5I2 948 aa13.52□□□□□ -0.25
CCHCR1-215ENST00000488920 MAFBQ9Y5Q3 323 aaPredicted RBP13.52□□□□□ -0.25
CCHCR1-215ENST00000488920 PTPRSQ13332 1948 aa13.52□□□□□ -0.25
CCHCR1-215ENST00000488920 SPTBN5Q9NRC6 3674 aaKnown RBP13.52□□□□□ -0.25
CCHCR1-215ENST00000488920 XIRP2A4UGR9 3374 aa13.51□□□□□ -0.25
CCHCR1-215ENST00000488920 SCRN1Q12765 414 aa13.51□□□□□ -0.25
CCHCR1-215ENST00000488920 TMEM266Q2M3C6 531 aa13.51□□□□□ -0.25
CCHCR1-215ENST00000488920 TMEM192Q8IY95 271 aa13.51□□□□□ -0.25
CCHCR1-215ENST00000488920 SMAP1Q8IYB5 467 aaPredicted RBP13.51□□□□□ -0.25
CCHCR1-215ENST00000488920 BLIDQ8IZY5 108 aa13.51□□□□□ -0.25
CCHCR1-215ENST00000488920 ADAMTS19Q8TE59 1207 aa13.51□□□□□ -0.25
CCHCR1-215ENST00000488920 LINC01599Q8WXQ3 324 aa13.51□□□□□ -0.25
CCHCR1-215ENST00000488920 SLKQ9H2G2 1235 aaPredicted RBP13.51□□□□□ -0.25
CCHCR1-215ENST00000488920 CDHR5Q9HBB8 845 aa13.51□□□□□ -0.25
CCHCR1-215ENST00000488920 TPCN1Q9ULQ1 816 aa13.51□□□□□ -0.25
CCHCR1-215ENST00000488920 PADI3Q9ULW8 664 aa13.51□□□□□ -0.25
CCHCR1-215ENST00000488920 KCNJ14Q9UNX9 436 aa13.51□□□□□ -0.25
CCHCR1-215ENST00000488920 SQORQ9Y6N5 450 aa13.51□□□□□ -0.25
CCHCR1-215ENST00000488920 PRRC2BQ5JSZ5 2229 aaKnown RBP13.51□□□□□ -0.25
CCHCR1-215ENST00000488920 IGSF9BQ9UPX0 1349 aa13.5□□□□□ -0.25
CCHCR1-215ENST00000488920 WDR64B1ANS9 1081 aa13.5□□□□□ -0.25
CCHCR1-215ENST00000488920 M0R2N6 131 aa13.5□□□□□ -0.25
CCHCR1-215ENST00000488920 CHMP2AO43633 222 aa13.5□□□□□ -0.25
CCHCR1-215ENST00000488920 GAS7O60861 476 aa13.5□□□□□ -0.25
CCHCR1-215ENST00000488920 BMP1P13497 986 aa13.5□□□□□ -0.25
CCHCR1-215ENST00000488920 KCNQ1P51787 676 aa13.5□□□□□ -0.25
CCHCR1-215ENST00000488920 PAK2Q13177 524 aa13.5□□□□□ -0.25
CCHCR1-215ENST00000488920 NPY5RQ15761 445 aa13.5□□□□□ -0.25
CCHCR1-215ENST00000488920 AAK1Q2M2I8 961 aa13.5□□□□□ -0.25
CCHCR1-215ENST00000488920 FIBCD1Q8N539 461 aa13.5□□□□□ -0.25
CCHCR1-215ENST00000488920 METTL13Q8N6R0 699 aa13.5□□□□□ -0.25
CCHCR1-215ENST00000488920 BBXQ8WY36 941 aaPredicted RBP13.5□□□□□ -0.25
CCHCR1-215ENST00000488920 SLC5A5Q92911 643 aa13.5□□□□□ -0.25
CCHCR1-215ENST00000488920 HLA-CQ95604 372 aa13.5□□□□□ -0.25
CCHCR1-215ENST00000488920 SAMD11Q96NU1 681 aa13.5□□□□□ -0.25
CCHCR1-215ENST00000488920 PPP1R16BQ96T49 567 aa13.5□□□□□ -0.25
CCHCR1-215ENST00000488920 RIT2Q99578 217 aa13.5□□□□□ -0.25
CCHCR1-215ENST00000488920 DISC1Q9NRI5 854 aa13.5□□□□□ -0.25
CCHCR1-215ENST00000488920 COG5Q9UP83 839 aa13.5□□□□□ -0.25
CCHCR1-215ENST00000488920 COL1A2P08123 1366 aa13.49□□□□□ -0.25
Retrieved 100 of 20,778 RNA–protein pairs in 367.1 ms