RNA–Protein interactions for RNA: ENST00000485833.1

SMARCC1-207, Transcript of SWI/SNF related, matrix associated, actin dependent regulator of chromatin subfamily c member 1, humanhuman

TSL 5

Gene SMARCC1, Length 412 nt, Biotype processed transcript, Subcellular localisation Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SMARCC1-207ENST00000485833 KANSL2Q9H9L4 492 aa6.88□□□□□ -1.31
SMARCC1-207ENST00000485833 BARX1Q9HBU1 254 aaPredicted RBP6.88□□□□□ -1.31
SMARCC1-207ENST00000485833 TMEM260Q9NX78 707 aa6.88□□□□□ -1.31
SMARCC1-207ENST00000485833 TARBP1Q13395 1621 aaKnown RBP6.87□□□□□ -1.31
SMARCC1-207ENST00000485833 TOPBP1Q92547 1522 aa6.87□□□□□ -1.31
SMARCC1-207ENST00000485833 PLATP00750 562 aa6.87□□□□□ -1.31
SMARCC1-207ENST00000485833 SURF1Q15526 300 aa6.87□□□□□ -1.31
SMARCC1-207ENST00000485833 TBC1D10BQ4KMP7 808 aaPredicted RBP6.87□□□□□ -1.31
SMARCC1-207ENST00000485833 TMEM177Q53S58 311 aa6.87□□□□□ -1.31
SMARCC1-207ENST00000485833 CPZQ66K79 652 aa6.87□□□□□ -1.31
SMARCC1-207ENST00000485833 IGSF22Q8N9C0 903 aa6.87□□□□□ -1.31
SMARCC1-207ENST00000485833 CLUHP3Q96NS8 147 aa6.87□□□□□ -1.31
SMARCC1-207ENST00000485833 ADAM29Q9UKF5 820 aa6.87□□□□□ -1.31
SMARCC1-207ENST00000485833 SLC12A8A0AV02 714 aa6.86□□□□□ -1.31
SMARCC1-207ENST00000485833 H0Y858 1186 aa6.86□□□□□ -1.31
SMARCC1-207ENST00000485833 SCDO00767 359 aa6.86□□□□□ -1.31
SMARCC1-207ENST00000485833 PTGS1P23219 599 aa6.86□□□□□ -1.31
SMARCC1-207ENST00000485833 SEC23AQ15436 765 aa6.86□□□□□ -1.31
SMARCC1-207ENST00000485833 FSTL4Q6MZW2 842 aa6.86□□□□□ -1.31
SMARCC1-207ENST00000485833 Q6ZUG5 572 aa6.86□□□□□ -1.31
SMARCC1-207ENST00000485833 KBTBD2Q8IY47 623 aa6.86□□□□□ -1.31
SMARCC1-207ENST00000485833 KCNH7Q9NS40 1196 aa6.86□□□□□ -1.31
SMARCC1-207ENST00000485833 BTBD7Q9P203 1132 aa6.86□□□□□ -1.31
SMARCC1-207ENST00000485833 B4E1Z4 1266 aa6.85□□□□□ -1.31
SMARCC1-207ENST00000485833 K7ESM1 405 aa6.85□□□□□ -1.31
SMARCC1-207ENST00000485833 LAMTOR5O43504 91 aa6.85□□□□□ -1.31
SMARCC1-207ENST00000485833 ITGB3P05106 788 aa6.85□□□□□ -1.31
SMARCC1-207ENST00000485833 IGFALSP35858 605 aa6.85□□□□□ -1.31
SMARCC1-207ENST00000485833 EFEMP1Q12805 493 aa6.85□□□□□ -1.31
SMARCC1-207ENST00000485833 TM4SF20Q53R12 229 aa6.85□□□□□ -1.31
SMARCC1-207ENST00000485833 DPP8Q6V1X1 898 aaPredicted RBP6.85□□□□□ -1.31
SMARCC1-207ENST00000485833 PRRT2Q7Z6L0 340 aaPredicted RBP6.85□□□□□ -1.31
SMARCC1-207ENST00000485833 DDX53Q86TM3 631 aaKnown RBP6.85□□□□□ -1.31
SMARCC1-207ENST00000485833 REXO1L1PQ8IX06 675 aa6.85□□□□□ -1.31
SMARCC1-207ENST00000485833 C2orf69Q8N8R5 385 aa6.85□□□□□ -1.31
SMARCC1-207ENST00000485833 AJUBAQ96IF1 538 aa6.85□□□□□ -1.31
SMARCC1-207ENST00000485833 RBM15Q96T37 977 aaKnown RBP eCLIP6.85□□□□□ -1.31
SMARCC1-207ENST00000485833 INCENPQ9NQS7 918 aa6.85□□□□□ -1.31
SMARCC1-207ENST00000485833 ZNF536O15090 1300 aa6.84□□□□□ -1.31
SMARCC1-207ENST00000485833 ESYT3A0FGR9 886 aa6.84□□□□□ -1.31
SMARCC1-207ENST00000485833 DNAJC8O75937 253 aaPredicted RBP6.84□□□□□ -1.31
SMARCC1-207ENST00000485833 ASLP04424 464 aa6.84□□□□□ -1.31
SMARCC1-207ENST00000485833 MC4RP32245 332 aa6.84□□□□□ -1.31
SMARCC1-207ENST00000485833 SPATS1Q496A3 300 aa6.84□□□□□ -1.31
SMARCC1-207ENST00000485833 ZCCHC8Q6NZY4 707 aaKnown RBP6.84□□□□□ -1.31
SMARCC1-207ENST00000485833 RALYLQ86SE5 291 aaKnown RBP6.84□□□□□ -1.31
SMARCC1-207ENST00000485833 DLG3Q92796 817 aa6.84□□□□□ -1.31
SMARCC1-207ENST00000485833 KRTAP4-9Q9BYQ8 210 aa6.84□□□□□ -1.31
SMARCC1-207ENST00000485833 ZDHHC9Q9Y397 364 aa6.84□□□□□ -1.31
SMARCC1-207ENST00000485833 B3GALT1Q9Y5Z6 326 aa6.84□□□□□ -1.31
SMARCC1-207ENST00000485833 KIF13AQ9H1H9 1805 aa6.83□□□□□ -1.32
SMARCC1-207ENST00000485833 ERCC6L2Q5T890 1561 aa6.83□□□□□ -1.32
SMARCC1-207ENST00000485833 PPP1R12AO14974 1030 aaPredicted RBP6.83□□□□□ -1.32
SMARCC1-207ENST00000485833 OPA1O60313 960 aa6.83□□□□□ -1.32
SMARCC1-207ENST00000485833 HIP1RO75146 1068 aa6.83□□□□□ -1.32
SMARCC1-207ENST00000485833 ASMTLO95671 621 aa6.83□□□□□ -1.32
SMARCC1-207ENST00000485833 MMEP08473 750 aa6.83□□□□□ -1.32
SMARCC1-207ENST00000485833 SDHAP31040 664 aa6.83□□□□□ -1.32
SMARCC1-207ENST00000485833 CSF2RBP32927 897 aa6.83□□□□□ -1.32
SMARCC1-207ENST00000485833 IRF9Q00978 393 aa6.83□□□□□ -1.32
SMARCC1-207ENST00000485833 OTOP1Q7RTM1 612 aa6.83□□□□□ -1.32
SMARCC1-207ENST00000485833 SYNPOQ8N3V7 929 aa6.83□□□□□ -1.32
SMARCC1-207ENST00000485833 KATNBL1Q9H079 304 aa6.83□□□□□ -1.32
SMARCC1-207ENST00000485833 GALNT8Q9NY28 637 aa6.83□□□□□ -1.32
SMARCC1-207ENST00000485833 M0R2C6 588 aa6.82□□□□□ -1.32
SMARCC1-207ENST00000485833 FOXP2O15409 715 aa6.82□□□□□ -1.32
SMARCC1-207ENST00000485833 CUTAO60888 179 aa6.82□□□□□ -1.32
SMARCC1-207ENST00000485833 RFPL3O75679 317 aa6.82□□□□□ -1.32
SMARCC1-207ENST00000485833 GLRX3O76003 335 aaKnown RBP6.82□□□□□ -1.32
SMARCC1-207ENST00000485833 MPIG6BO95866 241 aa6.82□□□□□ -1.32
SMARCC1-207ENST00000485833 MECP2P51608 486 aaKnown RBP6.82□□□□□ -1.32
SMARCC1-207ENST00000485833 EPHB4P54760 987 aa6.82□□□□□ -1.32
SMARCC1-207ENST00000485833 IL13RA1P78552 427 aa6.82□□□□□ -1.32
SMARCC1-207ENST00000485833 ZNF460Q14592 562 aa6.82□□□□□ -1.32
SMARCC1-207ENST00000485833 ARHGEF18Q6ZSZ5 1173 aa6.82□□□□□ -1.32
SMARCC1-207ENST00000485833 ASB15Q8WXK1 588 aa6.82□□□□□ -1.32
SMARCC1-207ENST00000485833 RNPC3Q96LT9 517 aaKnown RBP6.82□□□□□ -1.32
SMARCC1-207ENST00000485833 BOCQ9BWV1 1114 aa6.82□□□□□ -1.32
SMARCC1-207ENST00000485833 SAMD15Q9P1V8 674 aa6.82□□□□□ -1.32
SMARCC1-207ENST00000485833 TNPO3Q9Y5L0 923 aaKnown RBP6.82□□□□□ -1.32
SMARCC1-207ENST00000485833 SNAPC4Q5SXM2 1469 aa6.81□□□□□ -1.32
SMARCC1-207ENST00000485833 B4GALT4O60513 344 aa6.81□□□□□ -1.32
SMARCC1-207ENST00000485833 POLD1P28340 1107 aa6.81□□□□□ -1.32
SMARCC1-207ENST00000485833 PPP2CBP62714 309 aa6.81□□□□□ -1.32
SMARCC1-207ENST00000485833 PPP2CAP67775 309 aa6.81□□□□□ -1.32
SMARCC1-207ENST00000485833 PABPC4Q13310 644 aaKnown RBP eCLIP6.81□□□□□ -1.32
SMARCC1-207ENST00000485833 TOP3AQ13472 1001 aaPredicted RBP6.81□□□□□ -1.32
SMARCC1-207ENST00000485833 STILQ15468 1287 aa6.81□□□□□ -1.32
SMARCC1-207ENST00000485833 ARHGAP44Q17R89 818 aa6.81□□□□□ -1.32
SMARCC1-207ENST00000485833 ZNF827Q17R98 1081 aa6.81□□□□□ -1.32
SMARCC1-207ENST00000485833 WDR72Q3MJ13 1102 aa6.81□□□□□ -1.32
SMARCC1-207ENST00000485833 GLB1LQ6UWU2 654 aa6.81□□□□□ -1.32
SMARCC1-207ENST00000485833 CXXC5Q7LFL8 322 aaKnown RBP6.81□□□□□ -1.32
SMARCC1-207ENST00000485833 GPR155Q7Z3F1 870 aa6.81□□□□□ -1.32
SMARCC1-207ENST00000485833 HOMER1Q86YM7 354 aa6.81□□□□□ -1.32
SMARCC1-207ENST00000485833 CHST14Q8NCH0 376 aa6.81□□□□□ -1.32
SMARCC1-207ENST00000485833 WNK4Q96J92 1243 aa6.81□□□□□ -1.32
SMARCC1-207ENST00000485833 GBP4Q96PP9 640 aa6.81□□□□□ -1.32
SMARCC1-207ENST00000485833 SSBP3Q9BWW4 388 aaPredicted RBP6.81□□□□□ -1.32
SMARCC1-207ENST00000485833 BTBD2Q9BX70 525 aa6.81□□□□□ -1.32
Retrieved 100 of 20,778 RNA–protein pairs in 44.2 ms