RNA–Protein interactions for RNA: ENST00000479941.1

ATG4B-219, Transcript of autophagy related 4B cysteine peptidase, humanhuman

TSL 2

Gene ATG4B, Length 374 nt, Biotype retained intron, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
ATG4B-219ENST00000479941 TAF2Q6P1X5 1199 aa12.16□□□□□ -0.46
ATG4B-219ENST00000479941 TMEM199Q8N511 208 aa12.16□□□□□ -0.46
ATG4B-219ENST00000479941 RETREG2Q8NC44 543 aa12.16□□□□□ -0.46
ATG4B-219ENST00000479941 BANK1Q8NDB2 785 aa12.16□□□□□ -0.46
ATG4B-219ENST00000479941 NEK9Q8TD19 979 aa12.16□□□□□ -0.46
ATG4B-219ENST00000479941 BADQ92934 168 aa12.16□□□□□ -0.46
ATG4B-219ENST00000479941 GDF15Q99988 308 aa12.16□□□□□ -0.46
ATG4B-219ENST00000479941 RAB34Q9BZG1 259 aa12.16□□□□□ -0.46
ATG4B-219ENST00000479941 PPP1R12CQ9BZL4 782 aa12.16□□□□□ -0.46
ATG4B-219ENST00000479941 TUBE1Q9UJT0 475 aa12.16□□□□□ -0.46
ATG4B-219ENST00000479941 KAT6AQ92794 2004 aa12.15□□□□□ -0.46
ATG4B-219ENST00000479941 POTEMA6NI47 508 aa12.15□□□□□ -0.46
ATG4B-219ENST00000479941 ZNF862O60290 1169 aa12.15□□□□□ -0.46
ATG4B-219ENST00000479941 CAND2O75155 1236 aa12.15□□□□□ -0.46
ATG4B-219ENST00000479941 RPLP2P05387 115 aaKnown RBP12.15□□□□□ -0.46
ATG4B-219ENST00000479941 MAGEA10P43363 369 aaPredicted RBP12.15□□□□□ -0.46
ATG4B-219ENST00000479941 FXR2P51116 673 aaKnown RBP eCLIP12.15□□□□□ -0.46
ATG4B-219ENST00000479941 IGBP1P78318 339 aa12.15□□□□□ -0.46
ATG4B-219ENST00000479941 ATP2C1P98194 919 aaPredicted RBP12.15□□□□□ -0.46
ATG4B-219ENST00000479941 MDM2Q00987 491 aaPredicted RBP12.15□□□□□ -0.46
ATG4B-219ENST00000479941 UGCGQ16739 394 aa12.15□□□□□ -0.46
ATG4B-219ENST00000479941 MARCH8Q5T0T0 291 aa12.15□□□□□ -0.46
ATG4B-219ENST00000479941 ARL6IP4Q66PJ3 421 aaKnown RBP12.15□□□□□ -0.46
ATG4B-219ENST00000479941 DTHD1Q6ZMT9 781 aa12.15□□□□□ -0.46
ATG4B-219ENST00000479941 ERMNQ8TAM6 284 aa12.15□□□□□ -0.46
ATG4B-219ENST00000479941 DHX38Q92620 1227 aaKnown RBP12.15□□□□□ -0.46
ATG4B-219ENST00000479941 HSD17B14Q9BPX1 270 aa12.15□□□□□ -0.46
ATG4B-219ENST00000479941 EIF2AK1Q9BQI3 630 aaKnown RBP12.15□□□□□ -0.46
ATG4B-219ENST00000479941 LXNQ9BS40 222 aa12.15□□□□□ -0.46
ATG4B-219ENST00000479941 ZSWIM4Q9H7M6 989 aa12.15□□□□□ -0.46
ATG4B-219ENST00000479941 STK24Q9Y6E0 443 aa12.15□□□□□ -0.46
ATG4B-219ENST00000479941 MYH9P35579 1960 aaKnown RBP12.15□□□□□ -0.46
ATG4B-219ENST00000479941 UMODL1Q5DID0 1318 aa12.14□□□□□ -0.47
ATG4B-219ENST00000479941 SLITRK3O94933 977 aa12.14□□□□□ -0.47
ATG4B-219ENST00000479941 PARNO95453 639 aaKnown RBP12.14□□□□□ -0.47
ATG4B-219ENST00000479941 ZSCAN22P10073 491 aaPredicted RBP12.14□□□□□ -0.47
ATG4B-219ENST00000479941 CKBP12277 381 aa12.14□□□□□ -0.47
ATG4B-219ENST00000479941 CYP2C18P33260 490 aa12.14□□□□□ -0.47
ATG4B-219ENST00000479941 BMP8BP34820 402 aa12.14□□□□□ -0.47
ATG4B-219ENST00000479941 FPGSQ05932 587 aa12.14□□□□□ -0.47
ATG4B-219ENST00000479941 TRIM71Q2Q1W2 868 aaKnown RBP12.14□□□□□ -0.47
ATG4B-219ENST00000479941 HAUS3Q68CZ6 603 aa12.14□□□□□ -0.47
ATG4B-219ENST00000479941 MTHFD1LQ6UB35 978 aa12.14□□□□□ -0.47
ATG4B-219ENST00000479941 TRMT1LQ7Z2T5 733 aaKnown RBP12.14□□□□□ -0.47
ATG4B-219ENST00000479941 RPAINQ86UA6 219 aa12.14□□□□□ -0.47
ATG4B-219ENST00000479941 RSPH3Q86UC2 560 aa12.14□□□□□ -0.47
ATG4B-219ENST00000479941 C4orf19Q8IY42 314 aa12.14□□□□□ -0.47
ATG4B-219ENST00000479941 IGSF22Q8N9C0 903 aa12.14□□□□□ -0.47
ATG4B-219ENST00000479941 DYDC2Q96IM9 177 aa12.14□□□□□ -0.47
ATG4B-219ENST00000479941 NIFKQ9BYG3 293 aaKnown RBP12.14□□□□□ -0.47
ATG4B-219ENST00000479941 LRWD1Q9UFC0 647 aa12.14□□□□□ -0.47
ATG4B-219ENST00000479941 PCDHA2Q9Y5H9 948 aa12.14□□□□□ -0.47
ATG4B-219ENST00000479941 SMIM35A0A1B0GVV1 85 aa12.13□□□□□ -0.47
ATG4B-219ENST00000479941 DDX11L8A8MPP1 907 aa12.13□□□□□ -0.47
ATG4B-219ENST00000479941 ZBTB42B2RXF5 422 aa12.13□□□□□ -0.47
ATG4B-219ENST00000479941 MAGEB2O15479 319 aa12.13□□□□□ -0.47
ATG4B-219ENST00000479941 STBD1O95210 358 aa12.13□□□□□ -0.47
ATG4B-219ENST00000479941 LYPLA2O95372 231 aa12.13□□□□□ -0.47
ATG4B-219ENST00000479941 F13A1P00488 732 aa12.13□□□□□ -0.47
ATG4B-219ENST00000479941 IQCF3P0C7M6 154 aa12.13□□□□□ -0.47
ATG4B-219ENST00000479941 SELPP16109 830 aa12.13□□□□□ -0.47
ATG4B-219ENST00000479941 MUTP22033 750 aa12.13□□□□□ -0.47
ATG4B-219ENST00000479941 KLRC1P26715 233 aa12.13□□□□□ -0.47
ATG4B-219ENST00000479941 RFC2P35250 354 aa12.13□□□□□ -0.47
ATG4B-219ENST00000479941 THPOP40225 353 aa12.13□□□□□ -0.47
ATG4B-219ENST00000479941 CCL23P55773 120 aa12.13□□□□□ -0.47
ATG4B-219ENST00000479941 CYP4A11Q02928 519 aa12.13□□□□□ -0.47
ATG4B-219ENST00000479941 PPIGQ13427 754 aaKnown RBP eCLIP12.13□□□□□ -0.471e-7■■■□□ 14.8
ATG4B-219ENST00000479941 CTTNQ14247 550 aaKnown RBP12.13□□□□□ -0.47
ATG4B-219ENST00000479941 SF3A1Q15459 793 aaKnown RBP12.13□□□□□ -0.47
ATG4B-219ENST00000479941 CHRDL2Q6WN34 429 aa12.13□□□□□ -0.47
ATG4B-219ENST00000479941 OTUD6AQ7L8S5 288 aa12.13□□□□□ -0.47
ATG4B-219ENST00000479941 TPH2Q8IWU9 490 aa12.13□□□□□ -0.47
ATG4B-219ENST00000479941 TRAPPC12Q8WVT3 735 aa12.13□□□□□ -0.47
ATG4B-219ENST00000479941 WNT8BQ93098 351 aa12.13□□□□□ -0.47
ATG4B-219ENST00000479941 POLR3CQ9BUI4 534 aaPredicted RBP12.13□□□□□ -0.47
ATG4B-219ENST00000479941 WNT8AQ9H1J5 351 aa12.13□□□□□ -0.47
ATG4B-219ENST00000479941 TUFT1Q9NNX1 390 aa12.13□□□□□ -0.47
ATG4B-219ENST00000479941 RGL1Q9NZL6 768 aa12.13□□□□□ -0.47
ATG4B-219ENST00000479941 SEPT9Q9UHD8 586 aaPredicted RBP12.13□□□□□ -0.47
ATG4B-219ENST00000479941 PPME1Q9Y570 386 aa12.13□□□□□ -0.47
ATG4B-219ENST00000479941 LAMA3Q16787 3333 aa12.13□□□□□ -0.47
ATG4B-219ENST00000479941 TRIP12Q14669 1992 aaPredicted RBP12.12□□□□□ -0.47
ATG4B-219ENST00000479941 LTBP2Q14767 1821 aa12.12□□□□□ -0.47
ATG4B-219ENST00000479941 RSPH10B2B2RC85 870 aa12.12□□□□□ -0.47
ATG4B-219ENST00000479941 C22orf31O95567 290 aa12.12□□□□□ -0.47
ATG4B-219ENST00000479941 RSPH10BP0C881 870 aa12.12□□□□□ -0.47
ATG4B-219ENST00000479941 CSF2RAP15509 400 aa12.12□□□□□ -0.47
ATG4B-219ENST00000479941 RPA1P27694 616 aa12.12□□□□□ -0.47
ATG4B-219ENST00000479941 YWHABP31946 246 aaKnown RBP12.12□□□□□ -0.47
ATG4B-219ENST00000479941 TBC1D8BQ0IIM8 1120 aa12.12□□□□□ -0.47
ATG4B-219ENST00000479941 TARBP2Q15633 366 aaKnown RBP12.12□□□□□ -0.47
ATG4B-219ENST00000479941 KRT79Q5XKE5 535 aa12.12□□□□□ -0.47
ATG4B-219ENST00000479941 FAM173BQ6P4H8 233 aa12.12□□□□□ -0.47
ATG4B-219ENST00000479941 RUFY4Q6ZNE9 571 aa12.12□□□□□ -0.47
ATG4B-219ENST00000479941 ANO5Q75V66 913 aa12.12□□□□□ -0.47
ATG4B-219ENST00000479941 LRRC8DQ7L1W4 858 aa12.12□□□□□ -0.47
ATG4B-219ENST00000479941 CATSPER3Q86XQ3 398 aa12.12□□□□□ -0.47
ATG4B-219ENST00000479941 EXOC8Q8IYI6 725 aa12.12□□□□□ -0.47
ATG4B-219ENST00000479941 RPUSD2Q8IZ73 545 aaKnown RBP12.12□□□□□ -0.47
Retrieved 100 of 20,778 RNA–protein pairs in 80.9 ms